RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 GALNT8Q9NY28 637 aa13.71□□□□□ -0.21
SEC13-206ENST00000397102 GUCA1BQ9UMX6 200 aa13.71□□□□□ -0.21
SEC13-206ENST00000397102 IKBKGQ9Y6K9 419 aa13.71□□□□□ -0.21
SEC13-206ENST00000397102 CHD3Q12873 2000 aaKnown RBP13.7□□□□□ -0.22
SEC13-206ENST00000397102 ANKRD33BA6NCL7 494 aa13.7□□□□□ -0.22
SEC13-206ENST00000397102 CASKO14936 926 aa13.7□□□□□ -0.22
SEC13-206ENST00000397102 WDR47O94967 919 aa13.7□□□□□ -0.22
SEC13-206ENST00000397102 LRATO95237 230 aa13.7□□□□□ -0.22
SEC13-206ENST00000397102 HPNP05981 417 aa13.7□□□□□ -0.22
SEC13-206ENST00000397102 TMIGD3P0DMS9 266 aaPredicted RBP13.7□□□□□ -0.22
SEC13-206ENST00000397102 PGAM1P18669 254 aa13.7□□□□□ -0.22
SEC13-206ENST00000397102 STT3AP46977 705 aa13.7□□□□□ -0.22
SEC13-206ENST00000397102 HNMTP50135 292 aa13.7□□□□□ -0.22
SEC13-206ENST00000397102 CDK9P50750 372 aaKnown RBP13.7□□□□□ -0.22
SEC13-206ENST00000397102 ZNF75DP51815 510 aa13.7□□□□□ -0.22
SEC13-206ENST00000397102 IGLV3-21P80748 117 aaPredicted RBP13.7□□□□□ -0.22
SEC13-206ENST00000397102 ID2Q02363 134 aa13.7□□□□□ -0.22
SEC13-206ENST00000397102 NTRK2Q16620 822 aa13.7□□□□□ -0.22
SEC13-206ENST00000397102 FAM45BPQ6NSW5 357 aa13.7□□□□□ -0.22
SEC13-206ENST00000397102 FAM45AQ8TCE6 357 aa13.7□□□□□ -0.22
SEC13-206ENST00000397102 DGAT2Q96PD7 388 aa13.7□□□□□ -0.22
SEC13-206ENST00000397102 EGFL8Q99944 293 aa13.7□□□□□ -0.22
SEC13-206ENST00000397102 MAPKAP1Q9BPZ7 522 aa13.7□□□□□ -0.22
SEC13-206ENST00000397102 ROGDIQ9GZN7 287 aa13.7□□□□□ -0.22
SEC13-206ENST00000397102 UBQLN3Q9H347 655 aa13.7□□□□□ -0.22
SEC13-206ENST00000397102 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.7□□□□□ -0.22
SEC13-206ENST00000397102 TRPS1Q9UHF7 1281 aa13.7□□□□□ -0.22
SEC13-206ENST00000397102 CORO1CQ9ULV4 474 aaPredicted RBP13.7□□□□□ -0.22
SEC13-206ENST00000397102 VWA7Q9Y334 891 aa13.7□□□□□ -0.22
SEC13-206ENST00000397102 SPACA6W5XKT8 324 aa13.7□□□□□ -0.22
SEC13-206ENST00000397102 TRIM64A6NGJ6 449 aa13.69□□□□□ -0.22
SEC13-206ENST00000397102 TRIM64BA6NI03 449 aa13.69□□□□□ -0.22
SEC13-206ENST00000397102 CDC7O00311 574 aa13.69□□□□□ -0.22
SEC13-206ENST00000397102 DYRK3O43781 588 aa13.69□□□□□ -0.22
SEC13-206ENST00000397102 TRAPPC6AO75865 159 aa13.69□□□□□ -0.22
SEC13-206ENST00000397102 BMP7P18075 431 aa13.69□□□□□ -0.22
SEC13-206ENST00000397102 MSH2P43246 934 aa13.69□□□□□ -0.22
SEC13-206ENST00000397102 RPL21P46778 160 aaKnown RBP13.69□□□□□ -0.22
SEC13-206ENST00000397102 SLC6A12P48065 614 aa13.69□□□□□ -0.22
SEC13-206ENST00000397102 KCNC1P48547 511 aa13.69□□□□□ -0.22
SEC13-206ENST00000397102 RCAN2Q14206 197 aa13.69□□□□□ -0.22
SEC13-206ENST00000397102 NAT8LQ8N9F0 302 aa13.69□□□□□ -0.22
SEC13-206ENST00000397102 C9orf106Q8NAJ2 232 aa13.69□□□□□ -0.22
SEC13-206ENST00000397102 ANKRD7Q92527 254 aa13.69□□□□□ -0.22
SEC13-206ENST00000397102 WDYHV1Q96HA8 205 aa13.69□□□□□ -0.22
SEC13-206ENST00000397102 FBXL20Q96IG2 436 aa13.69□□□□□ -0.22
SEC13-206ENST00000397102 KCNC2Q96PR1 638 aa13.69□□□□□ -0.22
SEC13-206ENST00000397102 SFXN3Q9BWM7 321 aa13.69□□□□□ -0.22
SEC13-206ENST00000397102 CAPS2Q9BXY5 557 aa13.69□□□□□ -0.22
SEC13-206ENST00000397102 UGT2B28Q9BY64 529 aa13.69□□□□□ -0.22
SEC13-206ENST00000397102 EHD1Q9H4M9 534 aa13.69□□□□□ -0.22
SEC13-206ENST00000397102 GPRC5BQ9NZH0 403 aa13.69□□□□□ -0.22
SEC13-206ENST00000397102 SLC6A5Q9Y345 797 aa13.69□□□□□ -0.22
SEC13-206ENST00000397102 OARD1Q9Y530 152 aa13.69□□□□□ -0.22
SEC13-206ENST00000397102 ATRQ13535 2644 aa13.69□□□□□ -0.22
SEC13-206ENST00000397102 FBN1P35555 2871 aaKnown RBP13.69□□□□□ -0.22
SEC13-206ENST00000397102 STAB1Q9NY15 2570 aa13.68□□□□□ -0.22
SEC13-206ENST00000397102 NPEPPSL1A6NEC2 478 aa13.68□□□□□ -0.22
SEC13-206ENST00000397102 FGF17O60258 216 aa13.68□□□□□ -0.22
SEC13-206ENST00000397102 ACSL3O95573 720 aa13.68□□□□□ -0.22
SEC13-206ENST00000397102 TTC4O95801 387 aa13.68□□□□□ -0.22
SEC13-206ENST00000397102 ZNF37AP17032 561 aaPredicted RBP13.68□□□□□ -0.22
SEC13-206ENST00000397102 FPR1P21462 350 aa13.68□□□□□ -0.22
SEC13-206ENST00000397102 GDF5P43026 501 aa13.68□□□□□ -0.22
SEC13-206ENST00000397102 CPA2P48052 419 aa13.68□□□□□ -0.22
SEC13-206ENST00000397102 BIKQ13323 160 aa13.68□□□□□ -0.22
SEC13-206ENST00000397102 SPANXN3Q5MJ09 141 aa13.68□□□□□ -0.22
SEC13-206ENST00000397102 DCST1Q5T197 706 aa13.68□□□□□ -0.22
SEC13-206ENST00000397102 ADNP2Q6IQ32 1131 aa13.68□□□□□ -0.22
SEC13-206ENST00000397102 TTC27Q6P3X3 843 aa13.68□□□□□ -0.22
SEC13-206ENST00000397102 ZNF793Q6ZN11 406 aa13.68□□□□□ -0.22
SEC13-206ENST00000397102 SLC29A4Q7RTT9 530 aa13.68□□□□□ -0.22
SEC13-206ENST00000397102 LUZP2Q86TE4 346 aa13.68□□□□□ -0.22
SEC13-206ENST00000397102 BBOF1Q8ND07 529 aa13.68□□□□□ -0.22
SEC13-206ENST00000397102 SRFBP1Q8NEF9 429 aaKnown RBP13.68□□□□□ -0.22
SEC13-206ENST00000397102 ZPLD1Q8TCW7 415 aa13.68□□□□□ -0.22
SEC13-206ENST00000397102 DIO2Q92813 273 aa13.68□□□□□ -0.22
SEC13-206ENST00000397102 ZFP3Q96NJ6 502 aa13.68□□□□□ -0.22
SEC13-206ENST00000397102 F2RL3Q96RI0 385 aa13.68□□□□□ -0.22
SEC13-206ENST00000397102 GAL3ST4Q96RP7 486 aa13.68□□□□□ -0.22
SEC13-206ENST00000397102 CCL19Q99731 98 aa13.68□□□□□ -0.22
SEC13-206ENST00000397102 TBCDQ9BTW9 1192 aa13.68□□□□□ -0.22
SEC13-206ENST00000397102 NDRG3Q9UGV2 375 aa13.68□□□□□ -0.22
SEC13-206ENST00000397102 TESMINQ9Y4I5 508 aa13.68□□□□□ -0.22
SEC13-206ENST00000397102 EXPH5Q8NEV8 1989 aa13.67□□□□□ -0.22
SEC13-206ENST00000397102 RAI1Q7Z5J4 1906 aaPredicted RBP13.67□□□□□ -0.22
SEC13-206ENST00000397102 HRKO00198 91 aa13.67□□□□□ -0.22
SEC13-206ENST00000397102 TP53I11O14683 189 aa13.67□□□□□ -0.22
SEC13-206ENST00000397102 SNX4O95219 450 aa13.67□□□□□ -0.22
SEC13-206ENST00000397102 CPN2P22792 545 aa13.67□□□□□ -0.22
SEC13-206ENST00000397102 ATP5A1P25705 553 aaKnown RBP13.67□□□□□ -0.22
SEC13-206ENST00000397102 PLIN5Q00G26 463 aa13.67□□□□□ -0.22
SEC13-206ENST00000397102 FOXF2Q12947 444 aa13.67□□□□□ -0.22
SEC13-206ENST00000397102 RPS6KA2Q15349 733 aa13.67□□□□□ -0.22
SEC13-206ENST00000397102 ACKR1Q16570 336 aa13.67□□□□□ -0.22
SEC13-206ENST00000397102 C18orf21Q32NC0 220 aaPredicted RBP13.67□□□□□ -0.22
SEC13-206ENST00000397102 DGAT2L6Q6ZPD8 337 aa13.67□□□□□ -0.22
SEC13-206ENST00000397102 UBE3DQ7Z6J8 389 aa13.67□□□□□ -0.22
SEC13-206ENST00000397102 OR4N5Q8IXE1 308 aa13.67□□□□□ -0.22
SEC13-206ENST00000397102 NKAPQ8N5F7 415 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms