RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 TMEM229AB2RXF0 380 aa11.96□□□□□ -0.49
TRIM39-204ENST00000396548 TMEM150CB9EJG8 249 aa11.96□□□□□ -0.49
TRIM39-204ENST00000396548 H0YIG0 161 aa11.96□□□□□ -0.49
TRIM39-204ENST00000396548 ACP1P24666 158 aa11.96□□□□□ -0.49
TRIM39-204ENST00000396548 SIM1P81133 766 aaPredicted RBP11.96□□□□□ -0.49
TRIM39-204ENST00000396548 FADDQ13158 208 aa11.96□□□□□ -0.49
TRIM39-204ENST00000396548 VEZF1Q14119 521 aa11.96□□□□□ -0.49
TRIM39-204ENST00000396548 MAPK11Q15759 364 aa11.96□□□□□ -0.49
TRIM39-204ENST00000396548 NDUFA9Q16795 377 aa11.96□□□□□ -0.49
TRIM39-204ENST00000396548 MTX3Q5HYI7 312 aa11.96□□□□□ -0.49
TRIM39-204ENST00000396548 CCDC116Q8IYX3 515 aa11.96□□□□□ -0.49
TRIM39-204ENST00000396548 SFXN5Q8TD22 340 aa11.96□□□□□ -0.49
TRIM39-204ENST00000396548 DCAF13Q9NV06 445 aaKnown RBP11.96□□□□□ -0.49
TRIM39-204ENST00000396548 SIDT1Q9NXL6 827 aaKnown RBP11.96□□□□□ -0.49
TRIM39-204ENST00000396548 CASQ2O14958 399 aaPredicted RBP11.96□□□□□ -0.5
TRIM39-204ENST00000396548 CREG1O75629 220 aa11.96□□□□□ -0.5
TRIM39-204ENST00000396548 ZNF806P0C7X5 589 aa11.96□□□□□ -0.5
TRIM39-204ENST00000396548 C8orf89P0DMQ9 161 aa11.96□□□□□ -0.5
TRIM39-204ENST00000396548 ETFAP13804 333 aa11.96□□□□□ -0.5
TRIM39-204ENST00000396548 CSNK2A2P19784 350 aaPredicted RBP11.96□□□□□ -0.5
TRIM39-204ENST00000396548 SOX11P35716 441 aa11.96□□□□□ -0.5
TRIM39-204ENST00000396548 FEN1P39748 380 aaKnown RBP11.96□□□□□ -0.5
TRIM39-204ENST00000396548 IGLV3-21P80748 117 aaPredicted RBP11.96□□□□□ -0.5
TRIM39-204ENST00000396548 SHC2P98077 582 aa11.96□□□□□ -0.5
TRIM39-204ENST00000396548 GRM7Q14831 915 aa11.96□□□□□ -0.5
TRIM39-204ENST00000396548 FHL5Q5TD97 284 aa11.96□□□□□ -0.5
TRIM39-204ENST00000396548 RNF130Q86XS8 419 aa11.96□□□□□ -0.5
TRIM39-204ENST00000396548 TMEM102Q8N9M5 508 aaPredicted RBP11.96□□□□□ -0.5
TRIM39-204ENST00000396548 OR4K14Q8NGD5 310 aa11.96□□□□□ -0.5
TRIM39-204ENST00000396548 TANKQ92844 425 aa11.96□□□□□ -0.5
TRIM39-204ENST00000396548 TBC1D20Q96BZ9 403 aa11.96□□□□□ -0.5
TRIM39-204ENST00000396548 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 RNF103-CHMP3A0A140T963 221 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 A8MU76 341 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 FGF17O60258 216 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 ERAL1O75616 437 aaKnown RBP11.95□□□□□ -0.5
TRIM39-204ENST00000396548 IFI6P09912 130 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 UMPSP11172 480 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 NTSP30990 170 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 PTDSS1P48651 473 aaKnown RBP11.95□□□□□ -0.5
TRIM39-204ENST00000396548 SNAP47Q5SQN1 464 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 ERICH5Q6P6B1 374 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 GIMAP5Q96F15 307 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 LRGUKQ96M69 825 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 TGFBR3LH3BV60 316 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 ZNF749O43361 778 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 KRT75O95678 551 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 NTRK1P04629 796 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 ATP1B1P05026 303 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 GPIP06744 558 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 GP1BAP07359 652 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 CD59P13987 128 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 TLX1P31314 330 aaPredicted RBP11.95□□□□□ -0.5
TRIM39-204ENST00000396548 MPIP34949 423 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 PCGF2P35227 344 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 GRK6P43250 576 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 CCT3P49368 545 aaKnown RBP11.95□□□□□ -0.5
TRIM39-204ENST00000396548 DUSP3P51452 185 aaPredicted RBP11.95□□□□□ -0.5
TRIM39-204ENST00000396548 FOLH1Q04609 750 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 MGAT2Q10469 447 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 EXOSC6Q5RKV6 272 aaKnown RBP11.95□□□□□ -0.5
TRIM39-204ENST00000396548 HMBOX1Q6NT76 420 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 C6orf120Q7Z4R8 191 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 FAM86B1Q8N7N1 296 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 ZFP28Q8NHY6 868 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 ELP4Q96EB1 424 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 RSRC1Q96IZ7 334 aaKnown RBP11.95□□□□□ -0.5
TRIM39-204ENST00000396548 CCDC74BQ96LY2 380 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 BBS4Q96RK4 519 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 CUTCQ9NTM9 273 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 PSME2Q9UL46 239 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 AP4S1Q9Y587 144 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 ZNF780BQ9Y6R6 833 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 DHRS12A0PJE2 317 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 PLOD2O00469 737 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 OR2B3O76000 313 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 SEMG1P04279 462 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 CPMP14384 443 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 PTGER1P34995 402 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 MAN2A2P49641 1150 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 XKP51811 444 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 PDX1P52945 283 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 ZFP36L1Q07352 338 aaKnown RBP11.95□□□□□ -0.5
TRIM39-204ENST00000396548 TCF15Q12870 199 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 MYBPC3Q14896 1274 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 NKG7Q16617 165 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 CYP51A1Q16850 503 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 ZNF628Q5EBL2 1059 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 CCDC80Q76M96 950 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 LRRC25Q8N386 305 aaPredicted RBP11.95□□□□□ -0.5
TRIM39-204ENST00000396548 HORMAD2Q8N7B1 307 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 TTC29Q8NA56 475 aaPredicted RBP11.95□□□□□ -0.5
TRIM39-204ENST00000396548 OR9A2Q8NGT5 310 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 MIPOL1Q8TD10 442 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 FIG4Q92562 907 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 MAL2Q969L2 176 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 NSMCE2Q96MF7 247 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 PKP2Q99959 881 aa11.95□□□□□ -0.5
TRIM39-204ENST00000396548 C6orf203Q9P0P8 240 aaPredicted RBP11.95□□□□□ -0.5
TRIM39-204ENST00000396548 ANGPTL2Q9UKU9 493 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms