RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 TSPAN6O43657 245 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 ALPPL2P10696 532 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 CD8BP10966 210 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 ATP1B2P14415 290 aaPredicted RBP13.62□□□□□ -0.23
CLIP2-203ENST00000395060 DDX5P17844 614 aaKnown RBP13.62□□□□□ -0.23
CLIP2-203ENST00000395060 SERPINA4P29622 427 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 DCST1Q5T197 706 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 ANXA8L1Q5VT79 327 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 USP45Q70EL2 814 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 TECPR1Q7Z6L1 1165 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 LAPTM4BQ86VI4 370 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 TRIM69Q86WT6 500 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.62□□□□□ -0.23
CLIP2-203ENST00000395060 SLC37A3Q8NCC5 494 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 SCLYQ96I15 445 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 RIPOR3Q96MK2 946 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 GDF15Q99988 308 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 KATNB1Q9BVA0 655 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 MTG2Q9H4K7 406 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 ZNF222Q9UK12 451 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 LRFN2Q9ULH4 789 aa13.62□□□□□ -0.23
CLIP2-203ENST00000395060 LSM2Q9Y333 95 aaKnown RBP13.62□□□□□ -0.23
CLIP2-203ENST00000395060 A0A1W2PRB8 838 aa13.61□□□□□ -0.23
CLIP2-203ENST00000395060 OR6C75A6NL08 312 aa13.61□□□□□ -0.23
CLIP2-203ENST00000395060 E9PQ18 207 aa13.61□□□□□ -0.23
CLIP2-203ENST00000395060 PRRG1O14668 218 aa13.61□□□□□ -0.23
CLIP2-203ENST00000395060 SGTAO43765 313 aa13.61□□□□□ -0.23
CLIP2-203ENST00000395060 EOMESO95936 686 aa13.61□□□□□ -0.23
CLIP2-203ENST00000395060 C8GP07360 202 aa13.61□□□□□ -0.23
CLIP2-203ENST00000395060 ALAS2P22557 587 aa13.61□□□□□ -0.23
CLIP2-203ENST00000395060 TIA1P31483 386 aaKnown RBP eCLIP13.61□□□□□ -0.23
CLIP2-203ENST00000395060 AP1S1P61966 158 aa13.61□□□□□ -0.23
CLIP2-203ENST00000395060 CSTF1Q05048 431 aaKnown RBP13.61□□□□□ -0.23
CLIP2-203ENST00000395060 SNAPC1Q16533 368 aa13.61□□□□□ -0.23
CLIP2-203ENST00000395060 CDKN3Q16667 212 aa13.61□□□□□ -0.23
CLIP2-203ENST00000395060 WASH2PQ6VEQ5 465 aa13.61□□□□□ -0.23
CLIP2-203ENST00000395060 FAM109AQ8N4B1 249 aa13.61□□□□□ -0.23
CLIP2-203ENST00000395060 OR4D11Q8NGI4 311 aa13.61□□□□□ -0.23
CLIP2-203ENST00000395060 AUTS2Q8WXX7 1259 aa13.61□□□□□ -0.23
CLIP2-203ENST00000395060 CLP1Q92989 425 aaKnown RBP13.61□□□□□ -0.23
CLIP2-203ENST00000395060 HHIPQ96QV1 700 aa13.61□□□□□ -0.23
CLIP2-203ENST00000395060 MKRN2Q9H000 416 aaKnown RBP13.61□□□□□ -0.23
CLIP2-203ENST00000395060 SPNS1Q9H2V7 528 aa13.61□□□□□ -0.23
CLIP2-203ENST00000395060 C1GALT1Q9NS00 363 aa13.61□□□□□ -0.23
CLIP2-203ENST00000395060 MARCH5Q9NX47 278 aa13.61□□□□□ -0.23
CLIP2-203ENST00000395060 B4GALT6Q9UBX8 382 aa13.61□□□□□ -0.23
CLIP2-203ENST00000395060 COL4A4P53420 1690 aaPredicted RBP13.61□□□□□ -0.23
CLIP2-203ENST00000395060 RECKO95980 971 aa13.61□□□□□ -0.23
CLIP2-203ENST00000395060 IL3P08700 152 aa13.61□□□□□ -0.23
CLIP2-203ENST00000395060 PRKACBP22694 351 aa13.61□□□□□ -0.23
CLIP2-203ENST00000395060 ETV3P41162 512 aa13.61□□□□□ -0.23
CLIP2-203ENST00000395060 TM4SF4P48230 202 aa13.61□□□□□ -0.23
CLIP2-203ENST00000395060 CTSCP53634 463 aa13.61□□□□□ -0.23
CLIP2-203ENST00000395060 PRKAG1P54619 331 aa13.61□□□□□ -0.23
CLIP2-203ENST00000395060 ASAH1Q13510 395 aa13.61□□□□□ -0.23
CLIP2-203ENST00000395060 SLBPQ14493 270 aaKnown RBP eCLIP13.61□□□□□ -0.23
CLIP2-203ENST00000395060 GPR33Q49SQ1 333 aa13.61□□□□□ -0.23
CLIP2-203ENST00000395060 GGTA1PQ4G0N0 100 aa13.61□□□□□ -0.23
CLIP2-203ENST00000395060 PXDC1Q5TGL8 231 aa13.61□□□□□ -0.23
CLIP2-203ENST00000395060 FAM205BPQ63HN1 556 aa13.61□□□□□ -0.23
CLIP2-203ENST00000395060 RETSATQ6NUM9 610 aa13.61□□□□□ -0.23
CLIP2-203ENST00000395060 ACSM5Q6NUN0 579 aa13.61□□□□□ -0.23
CLIP2-203ENST00000395060 MTFR2Q6P444 385 aa13.61□□□□□ -0.23
CLIP2-203ENST00000395060 TRIM40Q6P9F5 258 aa13.61□□□□□ -0.23
CLIP2-203ENST00000395060 XKRXQ6PP77 449 aa13.61□□□□□ -0.23
CLIP2-203ENST00000395060 RDH10Q8IZV5 341 aa13.61□□□□□ -0.23
CLIP2-203ENST00000395060 ZNF366Q8N895 744 aa13.61□□□□□ -0.23
CLIP2-203ENST00000395060 CHST14Q8NCH0 376 aa13.61□□□□□ -0.23
CLIP2-203ENST00000395060 KCTD7Q96MP8 289 aa13.61□□□□□ -0.23
CLIP2-203ENST00000395060 PPIL3Q9H2H8 161 aaKnown RBP13.61□□□□□ -0.23
CLIP2-203ENST00000395060 ANKRA2Q9H9E1 313 aa13.61□□□□□ -0.23
CLIP2-203ENST00000395060 KCNK12Q9HB15 430 aa13.61□□□□□ -0.23
CLIP2-203ENST00000395060 SPATA6Q9NWH7 488 aaPredicted RBP13.61□□□□□ -0.23
CLIP2-203ENST00000395060 CNOT2Q9NZN8 540 aaKnown RBP13.61□□□□□ -0.23
CLIP2-203ENST00000395060 STOX2Q9P2F5 926 aaPredicted RBP13.61□□□□□ -0.23
CLIP2-203ENST00000395060 SYN3O14994 580 aa13.6□□□□□ -0.23
CLIP2-203ENST00000395060 SSTR2P30874 369 aa13.6□□□□□ -0.23
CLIP2-203ENST00000395060 GZMKP49863 264 aa13.6□□□□□ -0.23
CLIP2-203ENST00000395060 HNMTP50135 292 aa13.6□□□□□ -0.23
CLIP2-203ENST00000395060 FCHO2Q0JRZ9 810 aa13.6□□□□□ -0.23
CLIP2-203ENST00000395060 C19orf48Q6RUI8 117 aa13.6□□□□□ -0.23
CLIP2-203ENST00000395060 KRT74Q7RTS7 529 aa13.6□□□□□ -0.23
CLIP2-203ENST00000395060 HORMAD2Q8N7B1 307 aa13.6□□□□□ -0.23
CLIP2-203ENST00000395060 NANOGP1Q8N7R0 232 aa13.6□□□□□ -0.23
CLIP2-203ENST00000395060 TMEM145Q8NBT3 493 aa13.6□□□□□ -0.23
CLIP2-203ENST00000395060 OR52I1Q8NGK6 324 aa13.6□□□□□ -0.23
CLIP2-203ENST00000395060 ZFAND1Q8TCF1 268 aa13.6□□□□□ -0.23
CLIP2-203ENST00000395060 C2orf49Q9BVC5 232 aaPredicted RBP13.6□□□□□ -0.23
CLIP2-203ENST00000395060 PLAGL1Q9UM63 463 aa13.6□□□□□ -0.23
CLIP2-203ENST00000395060 A0A1W2PQ45 241 aaPredicted RBP13.6□□□□□ -0.23
CLIP2-203ENST00000395060 A0A1W2PQY0 241 aa13.6□□□□□ -0.23
CLIP2-203ENST00000395060 BTN3A3O00478 584 aa13.6□□□□□ -0.23
CLIP2-203ENST00000395060 FRS3O43559 492 aa13.6□□□□□ -0.23
CLIP2-203ENST00000395060 OSMP13725 252 aa13.6□□□□□ -0.23
CLIP2-203ENST00000395060 XPAP23025 273 aaPredicted RBP13.6□□□□□ -0.23
CLIP2-203ENST00000395060 RPS5P46782 204 aaKnown RBP13.6□□□□□ -0.23
CLIP2-203ENST00000395060 SRP54P61011 504 aaKnown RBP13.6□□□□□ -0.23
CLIP2-203ENST00000395060 FABP5Q01469 135 aa13.6□□□□□ -0.23
CLIP2-203ENST00000395060 CNTN1Q12860 1018 aa13.6□□□□□ -0.23
CLIP2-203ENST00000395060 GINS1Q14691 196 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms