RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 PLPP6Q8IY26 295 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 ZNF683Q8IZ20 524 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 HS3ST5Q8IZT8 346 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 LIX1Q8N485 282 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 FANK1Q8TC84 345 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 HCAR2Q8TDS4 363 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 L3HYPDHQ96EM0 354 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 COQ10AQ96MF6 247 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 ASB16Q96NS5 453 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 ZNF382Q96SR6 550 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 EFCAB11Q9BUY7 163 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 RAB11FIP5Q9BXF6 653 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 HDHD5Q9BXW7 423 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 RC3H2Q9HBD1 1191 aaKnown RBP5.44□□□□□ -1.54
RFFL-202ENST00000394597 WASH6PQ9NQA3 447 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 NDUFAF4Q9P032 175 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 MED11Q9P086 117 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 HCN2Q9UL51 889 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 ENTPD4Q9Y227 616 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 RUVBL1Q9Y265 456 aaKnown RBP5.44□□□□□ -1.54
RFFL-202ENST00000394597 HRH3Q9Y5N1 445 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 A0A1W2PQU0 124 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 H3BQ06 376 aaPredicted RBP5.44□□□□□ -1.54
RFFL-202ENST00000394597 SCAMP1O15126 338 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 RNGTTO60942 597 aaKnown RBP5.44□□□□□ -1.54
RFFL-202ENST00000394597 SLC22A5O76082 557 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 DIRAS1O95057 198 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 FHP07954 510 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 SPNP16150 400 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 RAB3AP20336 220 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 SLC6A2P23975 617 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 NDUFS1P28331 727 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 PBX2P40425 430 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 KIR3DL1P43629 444 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 BDKRB1P46663 353 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 UGT2B15P54855 530 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 OR4D2P58180 307 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 RPS14P62263 151 aaKnown RBP5.44□□□□□ -1.54
RFFL-202ENST00000394597 SPIBQ01892 262 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 TARDBPQ13148 414 aaKnown RBP eCLIP5.44□□□□□ -1.542e-7■■■■□ 25.7
RFFL-202ENST00000394597 SLAMF1Q13291 335 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 FGL2Q14314 439 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 CRTC2Q53ET0 693 aaPredicted RBP5.44□□□□□ -1.54
RFFL-202ENST00000394597 KIAA1614Q5VZ46 1190 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 FRG2Q64ET8 278 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 PRSS48Q7RTY5 328 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 LAPTM4BQ86VI4 370 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 Q8N402 240 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 OR9A1PQ8NGU1 263 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 OR6F1Q8NGZ6 308 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 OR52J3Q8NH60 311 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 ZFAND1Q8TCF1 268 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 CD200R1Q8TD46 325 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 RERGQ96A58 199 aaPredicted RBP5.44□□□□□ -1.54
RFFL-202ENST00000394597 FUBP1Q96AE4 644 aaKnown RBP5.44□□□□□ -1.54
RFFL-202ENST00000394597 KCNC2Q96PR1 638 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 FRG2BQ96QU4 278 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 MNTQ99583 582 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 PBX4Q9BYU1 374 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 OR51E2Q9H255 320 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 INTS7Q9NVH2 962 aaKnown RBP5.44□□□□□ -1.54
RFFL-202ENST00000394597 SLC39A1Q9NY26 324 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 PTGFRNQ9P2B2 879 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 CORO2BQ9UQ03 480 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 MGAT4BQ9UQ53 548 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 TTC3P53804 2025 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 TRIP11Q15643 1979 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 FAM234BA2RU67 622 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 DISC1C4P0D8 188 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 H7C0S8 307 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 MANBAO00462 879 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 PEX11BO96011 259 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 TNFP01375 233 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 JUNP05412 331 aaKnown RBP5.44□□□□□ -1.54
RFFL-202ENST00000394597 BMP1P13497 986 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 FOSL2P15408 326 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 PPIBP23284 216 aaKnown RBP5.44□□□□□ -1.54
RFFL-202ENST00000394597 PPP2R1BP30154 601 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 NTSP30990 170 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 TNFSF8P32971 234 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 ACTR1BP42025 376 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 ACTR1AP61163 376 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 GPR19Q15760 415 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 CORO6Q6QEF8 472 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 USP30Q70CQ3 517 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 PARS2Q7L3T8 475 aaKnown RBP5.44□□□□□ -1.54
RFFL-202ENST00000394597 KDM1BQ8NB78 822 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 PAPD5Q8NDF8 572 aaKnown RBP5.44□□□□□ -1.54
RFFL-202ENST00000394597 KLHL6Q8WZ60 621 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 SMPDL3AQ92484 453 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 PPCDCQ96CD2 204 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 SPACA7Q96KW9 195 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 NSUN5Q96P11 429 aaKnown RBP5.44□□□□□ -1.54
RFFL-202ENST00000394597 KCNA7Q96RP8 456 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 MTERF1Q99551 399 aaKnown RBP5.44□□□□□ -1.54
RFFL-202ENST00000394597 TSNAXQ99598 290 aaKnown RBP5.44□□□□□ -1.54
RFFL-202ENST00000394597 MGLLQ99685 303 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 RBCK1Q9BYM8 510 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 NIPAL2Q9H841 368 aa5.44□□□□□ -1.54
RFFL-202ENST00000394597 FOLH1BQ9HBA9 442 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms