RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 ERN2Q76MJ5 926 aaKnown RBP12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 DENND4AQ7Z401 1863 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 SLC9B2Q86UD5 537 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 TAGAPQ8N103 731 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 OXR1Q8N573 874 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 CELF2-AS1Q8N7Q2 184 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 APOBEC4Q8WW27 367 aaKnown RBP12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 PPP1R16AQ96I34 528 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 COL21A1Q96P44 957 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 PSD2Q9BQI7 771 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 EFCAB11Q9BUY7 163 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 RERGLQ9H628 205 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 ZNF556Q9HAH1 456 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 LHX9Q9NQ69 397 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 PRSS16Q9NQE7 514 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 ERVK13-1Q9NX77 482 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 FAM32AQ9Y421 112 aaKnown RBP12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 H7BY64 318 aa12.8□□□□□ -0.36
GTF2F1-201ENST00000394456 HOXB3P14651 431 aaPredicted RBP12.8□□□□□ -0.36
GTF2F1-201ENST00000394456 RCVRNP35243 200 aa12.8□□□□□ -0.36
GTF2F1-201ENST00000394456 PXNP49023 591 aaPredicted RBP12.8□□□□□ -0.36
GTF2F1-201ENST00000394456 DBPQ10586 325 aaPredicted RBP12.8□□□□□ -0.36
GTF2F1-201ENST00000394456 RUNX3Q13761 415 aa12.8□□□□□ -0.36
GTF2F1-201ENST00000394456 ZNF750Q32MQ0 723 aa12.8□□□□□ -0.36
GTF2F1-201ENST00000394456 CCDC80Q76M96 950 aa12.8□□□□□ -0.36
GTF2F1-201ENST00000394456 ATCAYQ86WG3 371 aa12.8□□□□□ -0.36
GTF2F1-201ENST00000394456 ARMC8Q8IUR7 673 aa12.8□□□□□ -0.36
GTF2F1-201ENST00000394456 PRAP1Q96NZ9 151 aa12.8□□□□□ -0.36
GTF2F1-201ENST00000394456 MGLLQ99685 303 aa12.8□□□□□ -0.36
GTF2F1-201ENST00000394456 YIPF4Q9BSR8 244 aa12.8□□□□□ -0.36
GTF2F1-201ENST00000394456 KCNK12Q9HB15 430 aa12.8□□□□□ -0.36
GTF2F1-201ENST00000394456 PNMA8CA0A1B0GUJ8 204 aa12.8□□□□□ -0.36
GTF2F1-201ENST00000394456 ZAR1LA6NP61 321 aa12.8□□□□□ -0.36
GTF2F1-201ENST00000394456 M0R3H8 397 aa12.8□□□□□ -0.36
GTF2F1-201ENST00000394456 TMPRSS11DO60235 418 aa12.8□□□□□ -0.36
GTF2F1-201ENST00000394456 CNOT3O75175 753 aaKnown RBP12.8□□□□□ -0.36
GTF2F1-201ENST00000394456 CRISP1P54107 249 aa12.8□□□□□ -0.36
GTF2F1-201ENST00000394456 PDGFRLQ15198 375 aa12.8□□□□□ -0.36
GTF2F1-201ENST00000394456 SYPL1Q16563 259 aa12.8□□□□□ -0.36
GTF2F1-201ENST00000394456 DESI1Q6ICB0 168 aa12.8□□□□□ -0.36
GTF2F1-201ENST00000394456 TCTN3Q6NUS6 607 aa12.8□□□□□ -0.36
GTF2F1-201ENST00000394456 USP43Q70EL4 1123 aa12.8□□□□□ -0.36
GTF2F1-201ENST00000394456 CXorf40AQ8TE69 158 aa12.8□□□□□ -0.36
GTF2F1-201ENST00000394456 TM4SF18Q96CE8 201 aa12.8□□□□□ -0.36
GTF2F1-201ENST00000394456 WDR34Q96EX3 536 aa12.8□□□□□ -0.36
GTF2F1-201ENST00000394456 SLC6A18Q96N87 628 aa12.8□□□□□ -0.36
GTF2F1-201ENST00000394456 SDHCQ99643 169 aaPredicted RBP12.8□□□□□ -0.36
GTF2F1-201ENST00000394456 ANKRA2Q9H9E1 313 aa12.8□□□□□ -0.36
GTF2F1-201ENST00000394456 GDE1Q9NZC3 331 aa12.8□□□□□ -0.36
GTF2F1-201ENST00000394456 REV1Q9UBZ9 1251 aa12.8□□□□□ -0.36
GTF2F1-201ENST00000394456 KAT7O95251 611 aa12.79□□□□□ -0.36
GTF2F1-201ENST00000394456 IFNW1P05000 195 aa12.79□□□□□ -0.36
GTF2F1-201ENST00000394456 SERPIND1P05546 499 aa12.79□□□□□ -0.36
GTF2F1-201ENST00000394456 UGT2B10P36537 528 aa12.79□□□□□ -0.36
GTF2F1-201ENST00000394456 SOX9P48436 509 aa12.79□□□□□ -0.36
GTF2F1-201ENST00000394456 TMED10P49755 219 aaKnown RBP12.79□□□□□ -0.36
GTF2F1-201ENST00000394456 PIN1Q13526 163 aaPredicted RBP12.79□□□□□ -0.36
GTF2F1-201ENST00000394456 ZNF630Q2M218 657 aaPredicted RBP12.79□□□□□ -0.36
GTF2F1-201ENST00000394456 ZMAT1Q5H9K5 638 aa12.79□□□□□ -0.36
GTF2F1-201ENST00000394456 MLIPQ5VWP3 458 aa12.79□□□□□ -0.36
GTF2F1-201ENST00000394456 PPP2R2DQ66LE6 453 aa12.79□□□□□ -0.36
GTF2F1-201ENST00000394456 HIST2H2AA3Q6FI13 130 aa12.79□□□□□ -0.36
GTF2F1-201ENST00000394456 FAM129CQ86XR2 697 aa12.79□□□□□ -0.36
GTF2F1-201ENST00000394456 REPS1Q96D71 796 aa12.79□□□□□ -0.36
GTF2F1-201ENST00000394456 ABHD8Q96I13 439 aa12.79□□□□□ -0.36
GTF2F1-201ENST00000394456 METTL2AQ96IZ6 378 aaKnown RBP12.79□□□□□ -0.36
GTF2F1-201ENST00000394456 RPP25Q9BUL9 199 aaKnown RBP12.79□□□□□ -0.36
GTF2F1-201ENST00000394456 CNPPD1Q9BV87 410 aa12.79□□□□□ -0.36
GTF2F1-201ENST00000394456 MMP27Q9H306 513 aa12.79□□□□□ -0.36
GTF2F1-201ENST00000394456 EXOSC4Q9NPD3 245 aaKnown RBP12.79□□□□□ -0.36
GTF2F1-201ENST00000394456 WDR70Q9NW82 654 aa12.79□□□□□ -0.36
GTF2F1-201ENST00000394456 LINC00854A0A1B0GVQ3 168 aa12.79□□□□□ -0.36
GTF2F1-201ENST00000394456 ANHXE9PGG2 379 aa12.79□□□□□ -0.36
GTF2F1-201ENST00000394456 SH3BP5O60239 455 aa12.79□□□□□ -0.36
GTF2F1-201ENST00000394456 MANFP55145 182 aaKnown RBP12.79□□□□□ -0.36
GTF2F1-201ENST00000394456 TCEA2Q15560 299 aa12.79□□□□□ -0.36
GTF2F1-201ENST00000394456 DENND6BQ8NEG7 585 aa12.79□□□□□ -0.36
GTF2F1-201ENST00000394456 FCGR1BQ92637 280 aa12.79□□□□□ -0.36
GTF2F1-201ENST00000394456 OPALINQ96PE5 141 aa12.79□□□□□ -0.36
GTF2F1-201ENST00000394456 ZCCHC2Q9C0B9 1178 aaKnown RBP12.79□□□□□ -0.36
GTF2F1-201ENST00000394456 OR52A5Q9H2C5 316 aa12.79□□□□□ -0.36
GTF2F1-201ENST00000394456 XKR8Q9H6D3 395 aa12.79□□□□□ -0.36
GTF2F1-201ENST00000394456 MARCH7Q9H992 704 aa12.79□□□□□ -0.36
GTF2F1-201ENST00000394456 SIRT3Q9NTG7 399 aaPredicted RBP12.79□□□□□ -0.36
GTF2F1-201ENST00000394456 ANGPT4Q9Y264 503 aa12.79□□□□□ -0.36
GTF2F1-201ENST00000394456 LCMT2O60294 686 aaKnown RBP12.78□□□□□ -0.36
GTF2F1-201ENST00000394456 PCCBP05166 539 aa12.78□□□□□ -0.36
GTF2F1-201ENST00000394456 BSGP35613 385 aa12.78□□□□□ -0.36
GTF2F1-201ENST00000394456 MAPK12P53778 367 aa12.78□□□□□ -0.36
GTF2F1-201ENST00000394456 UGT2B15P54855 530 aa12.78□□□□□ -0.36
GTF2F1-201ENST00000394456 RBBP4Q09028 425 aa12.78□□□□□ -0.36
GTF2F1-201ENST00000394456 SFSWAPQ12872 951 aaKnown RBP12.78□□□□□ -0.36
GTF2F1-201ENST00000394456 BCL7AQ4VC05 210 aa12.78□□□□□ -0.36
GTF2F1-201ENST00000394456 REEP3Q6NUK4 255 aa12.78□□□□□ -0.36
GTF2F1-201ENST00000394456 GDPD3Q7L5L3 318 aa12.78□□□□□ -0.36
GTF2F1-201ENST00000394456 YAF2Q8IY57 180 aa12.78□□□□□ -0.36
GTF2F1-201ENST00000394456 CXorf40BQ96DE9 158 aa12.78□□□□□ -0.36
GTF2F1-201ENST00000394456 MYADMQ96S97 322 aa12.78□□□□□ -0.36
GTF2F1-201ENST00000394456 GPA33Q99795 319 aa12.78□□□□□ -0.36
GTF2F1-201ENST00000394456 NLNQ9BYT8 704 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms