RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 RDH16O75452 317 aa8.15□□□□□ -1.11
TDP1-203ENST00000393454 TNFRSF21O75509 655 aa8.15□□□□□ -1.11
TDP1-203ENST00000393454 CD1CP29017 333 aa8.15□□□□□ -1.11
TDP1-203ENST00000393454 GPLD1P80108 840 aa8.15□□□□□ -1.11
TDP1-203ENST00000393454 SHC2P98077 582 aa8.15□□□□□ -1.11
TDP1-203ENST00000393454 ID2Q02363 134 aa8.15□□□□□ -1.11
TDP1-203ENST00000393454 DUSP2Q05923 314 aa8.15□□□□□ -1.11
TDP1-203ENST00000393454 RBBP4Q09028 425 aa8.15□□□□□ -1.11
TDP1-203ENST00000393454 KCNAB1Q14722 419 aa8.15□□□□□ -1.11
TDP1-203ENST00000393454 TRIM61Q5EBN2 209 aa8.15□□□□□ -1.11
TDP1-203ENST00000393454 TMEM107Q6UX40 140 aa8.15□□□□□ -1.11
TDP1-203ENST00000393454 RABEPKQ7Z6M1 372 aa8.15□□□□□ -1.11
TDP1-203ENST00000393454 SLC44A2Q8IWA5 706 aaPredicted RBP8.15□□□□□ -1.11
TDP1-203ENST00000393454 EID3Q8N140 333 aa8.15□□□□□ -1.11
TDP1-203ENST00000393454 CA13Q8N1Q1 262 aa8.15□□□□□ -1.11
TDP1-203ENST00000393454 EID2Q8N6I1 236 aa8.15□□□□□ -1.11
TDP1-203ENST00000393454 OR9A2Q8NGT5 310 aa8.15□□□□□ -1.11
TDP1-203ENST00000393454 OR2I1PQ8NGU4 316 aa8.15□□□□□ -1.11
TDP1-203ENST00000393454 CEP76Q8TAP6 659 aa8.15□□□□□ -1.11
TDP1-203ENST00000393454 CENPNQ96H22 339 aaPredicted RBP8.15□□□□□ -1.11
TDP1-203ENST00000393454 NAF1Q96HR8 494 aaKnown RBP8.15□□□□□ -1.11
TDP1-203ENST00000393454 TPD52L3Q96J77 140 aa8.15□□□□□ -1.11
TDP1-203ENST00000393454 SLC35G5Q96KT7 338 aa8.15□□□□□ -1.11
TDP1-203ENST00000393454 GTPBP2Q9BX10 602 aaKnown RBP8.15□□□□□ -1.11
TDP1-203ENST00000393454 ASXL3Q9C0F0 2248 aa8.15□□□□□ -1.11
TDP1-203ENST00000393454 SPRTNQ9H040 489 aaPredicted RBP8.15□□□□□ -1.11
TDP1-203ENST00000393454 EPS8L2Q9H6S3 715 aa8.15□□□□□ -1.11
TDP1-203ENST00000393454 COQ10BQ9H8M1 238 aa8.15□□□□□ -1.11
TDP1-203ENST00000393454 AGPAT4Q9NRZ5 378 aa8.15□□□□□ -1.11
TDP1-203ENST00000393454 ZCCHC3Q9NUD5 404 aaKnown RBP8.15□□□□□ -1.11
TDP1-203ENST00000393454 TMEM9Q9P0T7 183 aa8.15□□□□□ -1.11
TDP1-203ENST00000393454 TRPC4Q9UBN4 977 aa8.15□□□□□ -1.11
TDP1-203ENST00000393454 SPTBP11277 2137 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 MYOCOSA0A1B0GUC4 107 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 C5orf58C9J3I9 102 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 FAM227AF5H4B4 570 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 GNGT2O14610 69 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 YKT6O15498 198 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 CLOCKO15516 846 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 SP9P0CG40 484 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 BMP2P12643 396 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 CKMT2P17540 419 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 ATP6V1C1P21283 382 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 MATN1P21941 496 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 CCT8P50990 548 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 SKP1P63208 163 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 CDK6Q00534 326 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 ATP6AP1Q15904 470 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 NKG7Q16617 165 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 NRF1Q16656 503 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 ZNF630Q2M218 657 aaPredicted RBP8.14□□□□□ -1.11
TDP1-203ENST00000393454 PRTGQ2VWP7 1150 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 TCTE1Q5JU00 501 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 INTS11Q5TA45 600 aaKnown RBP8.14□□□□□ -1.11
TDP1-203ENST00000393454 ZBTB49Q6ZSB9 765 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 FKBP9P1Q75LS8 142 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 KANSL1Q7Z3B3 1105 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 LRRC25Q8N386 305 aaPredicted RBP8.14□□□□□ -1.11
TDP1-203ENST00000393454 METTL27Q8N6F8 245 aaPredicted RBP8.14□□□□□ -1.11
TDP1-203ENST00000393454 HORMAD2Q8N7B1 307 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 ANKFN1Q8N957 763 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 OR4C6Q8NH72 309 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 PSMA8Q8TAA3 256 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 SUN3Q8TAQ9 357 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 KAT2AQ92830 837 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 RAB8BQ92930 207 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 POP5Q969H6 163 aaKnown RBP8.14□□□□□ -1.11
TDP1-203ENST00000393454 C10orf90Q96M02 699 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 YIPF4Q9BSR8 244 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 BDH2Q9BUT1 245 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 NPLQ9BXD5 320 aaPredicted RBP8.14□□□□□ -1.11
TDP1-203ENST00000393454 ASPSCR1Q9BZE9 553 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 TMEM38AQ9H6F2 299 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 SYNDIG1Q9H7V2 258 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 C3orf14Q9HBI5 128 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 OLAHQ9NV23 265 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 ADPRHL2Q9NX46 363 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 HCN3Q9P1Z3 774 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 SLC6A14Q9UN76 642 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 RP1P56715 2156 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 TMEM247A6NEH6 219 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 TMEM150CB9EJG8 249 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 CASC3O15234 703 aaKnown RBP8.14□□□□□ -1.11
TDP1-203ENST00000393454 EMC8O43402 210 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 CHST10O43529 356 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 B4GALT2O60909 372 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 LDB3O75112 727 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 DEAF1O75398 565 aaPredicted RBP8.14□□□□□ -1.11
TDP1-203ENST00000393454 CST1P01037 141 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 OR12D1P0DN82 309 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 ACADSP16219 412 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 CSF2RBP32927 897 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 HOXD12P35452 270 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 MC3RP41968 323 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 RAB38P57729 211 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 HSD11B2P80365 405 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 PRR5P85299 388 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 CFHR1Q03591 330 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 FOLH1Q04609 750 aa8.14□□□□□ -1.11
TDP1-203ENST00000393454 ANGPT1Q15389 498 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms