RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 AP3M1Q9Y2T2 418 aa11.51□□□□□ -0.57
SPTBN1-203ENST00000389980 COMMD3-BMI1R4GMX3 469 aa11.51□□□□□ -0.57
SPTBN1-203ENST00000389980 RALGAPA1Q6GYQ0 2036 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 A0A0A6YYC8 382 aaPredicted RBP11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 I3L1I5 382 aaPredicted RBP11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 ARHGAP33O14559 1287 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 UQCRC2P22695 453 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 GPC1P35052 558 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 BUD31P41223 144 aaPredicted RBP11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 CCT8P50990 548 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 SHC2P98077 582 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 VMACQ2NL98 169 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 PRTGQ2VWP7 1150 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 MANEAQ5SRI9 462 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 CPZQ66K79 652 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 HMBOX1Q6NT76 420 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 SZRD1Q7Z422 152 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 METTL27Q8N6F8 245 aaPredicted RBP11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 GATA6Q92908 595 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 RNF31Q96EP0 1072 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 DUS3LQ96G46 650 aaKnown RBP11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 ZNF764Q96H86 408 aaPredicted RBP11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 C10orf90Q96M02 699 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 EPS8L2Q9H6S3 715 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 GORASP2Q9H8Y8 452 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 ANKRA2Q9H9E1 313 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 ACSS1Q9NUB1 689 aaPredicted RBP11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 SLC6A14Q9UN76 642 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 PLCL2Q9UPR0 1127 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 DTNAQ9Y4J8 743 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 SLC22A7Q9Y694 548 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 FAM149AA5PLN7 773 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 MYO1GB0I1T2 1018 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 TXNDC9O14530 226 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 SRPX2O60687 465 aaPredicted RBP11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 ZBTB11O95625 1053 aaPredicted RBP11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 ZNF10P21506 573 aaPredicted RBP11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 AQP1P29972 269 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 NTSP30990 170 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 SPIDRQ14159 915 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 NR1D2Q14995 579 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 NR0B2Q15466 257 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 GPR19Q15760 415 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 ZNF528Q3MIS6 628 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 SPDYE7PQ495Y7 208 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 OGFRL1Q5TC84 451 aaPredicted RBP11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 SLC23A3Q6PIS1 610 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 PLXDC1Q8IUK5 500 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 CA13Q8N1Q1 262 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 TMEM102Q8N9M5 508 aaPredicted RBP11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 ADCY4Q8NFM4 1077 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 OR52N2Q8NGI0 321 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 CEP76Q8TAP6 659 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 DOK4Q8TEW6 326 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 PPWD1Q96BP3 646 aaKnown RBP11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 RNF145Q96MT1 663 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 ARRDC1-AS1Q9H2J1 176 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 NDUFA13Q9P0J0 144 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 C6orf203Q9P0P8 240 aaPredicted RBP11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 PHF11Q9UIL8 331 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 ANAPC2Q9UJX6 822 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 FAF1Q9UNN5 650 aaPredicted RBP11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 ENTPD4Q9Y227 616 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 R4GN57 208 aa11.5□□□□□ -0.57
SPTBN1-203ENST00000389980 NINQ8N4C6 2090 aa11.49□□□□□ -0.57
SPTBN1-203ENST00000389980 CASQ2O14958 399 aaPredicted RBP11.49□□□□□ -0.57
SPTBN1-203ENST00000389980 FOXS1O43638 330 aa11.49□□□□□ -0.57
SPTBN1-203ENST00000389980 LDB3O75112 727 aa11.49□□□□□ -0.57
SPTBN1-203ENST00000389980 NME6O75414 186 aaPredicted RBP11.49□□□□□ -0.57
SPTBN1-203ENST00000389980 SERPINA1P01009 418 aa11.49□□□□□ -0.57
SPTBN1-203ENST00000389980 DDX5P17844 614 aaKnown RBP11.49□□□□□ -0.57
SPTBN1-203ENST00000389980 PPIBP23284 216 aaKnown RBP11.49□□□□□ -0.57
SPTBN1-203ENST00000389980 RANBP1P43487 201 aa11.49□□□□□ -0.57
SPTBN1-203ENST00000389980 CCT3P49368 545 aaKnown RBP11.49□□□□□ -0.57
SPTBN1-203ENST00000389980 GPLD1P80108 840 aa11.49□□□□□ -0.57
SPTBN1-203ENST00000389980 MAT1AQ00266 395 aaKnown RBP11.49□□□□□ -0.57
SPTBN1-203ENST00000389980 TP53BP2Q13625 1128 aa11.49□□□□□ -0.57
SPTBN1-203ENST00000389980 LTB4RQ15722 352 aa11.49□□□□□ -0.57
SPTBN1-203ENST00000389980 NKG7Q16617 165 aa11.49□□□□□ -0.57
SPTBN1-203ENST00000389980 PRAMEF17Q5VTA0 474 aa11.49□□□□□ -0.57
SPTBN1-203ENST00000389980 TNFAIP8L2Q6P589 184 aaPredicted RBP11.49□□□□□ -0.57
SPTBN1-203ENST00000389980 C6orf120Q7Z4R8 191 aa11.49□□□□□ -0.57
SPTBN1-203ENST00000389980 NATD1Q8N6N6 113 aa11.49□□□□□ -0.57
SPTBN1-203ENST00000389980 OR9A2Q8NGT5 310 aa11.49□□□□□ -0.57
SPTBN1-203ENST00000389980 COL26A1Q96A83 441 aa11.49□□□□□ -0.57
SPTBN1-203ENST00000389980 ZNF681Q96N22 645 aa11.49□□□□□ -0.57
SPTBN1-203ENST00000389980 CD180Q99467 661 aa11.49□□□□□ -0.57
SPTBN1-203ENST00000389980 RBCK1Q9BYM8 510 aa11.49□□□□□ -0.57
SPTBN1-203ENST00000389980 SYNDIG1Q9H7V2 258 aa11.49□□□□□ -0.57
SPTBN1-203ENST00000389980 ANKHQ9HCJ1 492 aa11.49□□□□□ -0.57
SPTBN1-203ENST00000389980 NEUROD4Q9HD90 331 aa11.49□□□□□ -0.57
SPTBN1-203ENST00000389980 ARMC1Q9NVT9 282 aa11.49□□□□□ -0.57
SPTBN1-203ENST00000389980 HCN3Q9P1Z3 774 aa11.49□□□□□ -0.57
SPTBN1-203ENST00000389980 CORO2BQ9UQ03 480 aa11.49□□□□□ -0.57
SPTBN1-203ENST00000389980 CLCA2Q9UQC9 943 aa11.49□□□□□ -0.57
SPTBN1-203ENST00000389980 TMEM150CB9EJG8 249 aa11.48□□□□□ -0.57
SPTBN1-203ENST00000389980 CYR61O00622 381 aa11.48□□□□□ -0.57
SPTBN1-203ENST00000389980 TNFRSF21O75509 655 aa11.48□□□□□ -0.57
SPTBN1-203ENST00000389980 PRKD3O94806 890 aa11.48□□□□□ -0.57
SPTBN1-203ENST00000389980 GPIP06744 558 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms