RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 TEX26Q8N6G2 289 aa12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 LINC01465Q8N7H1 131 aa12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 GPR26Q8NDV2 337 aa12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 COQ8AQ8NI60 647 aa12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 RANBP3Q9H6Z4 567 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 VNN3Q9NY84 501 aa12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 TBC1D24Q9ULP9 559 aa12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 PCDHGA6Q9Y5G7 932 aa12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 H3BSH0 61 aa12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 PROM1O43490 865 aa12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 OR10H2O60403 315 aa12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 HPGDSO60760 199 aa12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 OAZ2O95190 189 aa12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 CCR7P32248 378 aa12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 RHAGQ02094 409 aa12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 SLC9A5Q14940 896 aa12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 OR2G6Q5TZ20 316 aa12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 SMG9Q9H0W8 520 aaKnown RBP12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 CARS2Q9HA77 564 aaKnown RBP12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 FOLH1BQ9HBA9 442 aa12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 NUDT15Q9NV35 164 aa12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 KLK4Q9Y5K2 254 aa12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 ARFGEF1Q9Y6D6 1849 aa12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 M0R3H8 397 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 SMAD9O15198 467 aaKnown RBP12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 SOCS5O75159 536 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 REM1O75628 298 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 SELPP16109 830 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 CD9P21926 228 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 APEX1P27695 318 aaKnown RBP12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 HOXC13P31276 330 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 TBPL1P62380 186 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 TMEM115Q12893 351 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 C1QTNF12Q5T7M4 302 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 GARNL3Q5VVW2 1013 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 PGBD3Q8N328 593 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 BHLHE41Q9C0J9 482 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 MED11Q9P086 117 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 OR10H1Q9Y4A9 318 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 PCDHGB2Q9Y5G2 931 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 SMLR1H3BR10 107 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 MEN1O00255 615 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 CCL16O15467 120 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 ERI3O43414 337 aaKnown RBP12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 C1GALT1C1LP0DN25 315 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 ACVR1BP36896 505 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 WNT4P56705 351 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 MAP4K2Q12851 820 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 RTL4Q6ZR62 310 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 SERINC5Q86VE9 423 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 RANBP3LQ86VV4 465 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 SCRN2Q96FV2 425 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 GON7Q9BXV9 100 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 HOXD1Q9GZZ0 328 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 C11orf54Q9H0W9 315 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 RRAGCQ9HB90 399 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 CALML5Q9NZT1 146 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 A0A075B6Q4 140 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 NPIPB15A6NHN6 443 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 KMOO15229 486 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 ICMTO60725 284 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 SLC19A2O60779 497 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 HK1P19367 917 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 KELP23276 732 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 SUOXP51687 545 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 YBX1P67809 324 aaKnown RBP12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 ZNF91Q05481 1191 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 POU4F3Q15319 338 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 RTP2Q5QGT7 225 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 CRTC1Q6UUV9 634 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 SLC16A12Q6ZSM3 486 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 VASH1Q7L8A9 365 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 BCDIN3DQ7Z5W3 292 aaKnown RBP12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 CEACAM19Q7Z692 300 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 LINC00471Q8N535 108 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 RPLP0P6Q8NHW5 317 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 RGMAQ96B86 450 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 F2RL3Q96RI0 385 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 NDRG4Q9ULP0 352 aaKnown RBP12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 H7BY64 318 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 TAPBPO15533 448 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 CACNG3O60359 315 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 PRAMEF12O95522 483 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 PCCBP05166 539 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 CLEC2LP0C7M8 214 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 HSD3B1P14060 373 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 NT5EP21589 574 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 F8A1P23610 371 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 HSD3B2P26439 372 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 HBA1P69905 142 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 OLFML2AQ68BL7 652 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 OAFQ86UD1 273 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 FAM109AQ8N4B1 249 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 DNAJC5GQ8N7S2 189 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 ZCCHC10Q8TBK6 192 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 YIPF6Q96EC8 236 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 PDLIM5Q96HC4 596 aaKnown RBP12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 PRAP1Q96NZ9 151 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 PSD2Q9BQI7 771 aa12.54□□□□□ -0.4
TRAPPC9-201ENST00000389328 RLIMQ9NVW2 624 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms