RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 CXorf49A8MYA2 514 aaPredicted RBP16.47■□□□□ 0.23
RPUSD3-201ENST00000383820 PCNAP12004 261 aa16.47■□□□□ 0.23
RPUSD3-201ENST00000383820 CD99P14209 185 aa16.47■□□□□ 0.23
RPUSD3-201ENST00000383820 SSTR1P30872 391 aa16.47■□□□□ 0.23
RPUSD3-201ENST00000383820 TLX1P31314 330 aaPredicted RBP16.47■□□□□ 0.23
RPUSD3-201ENST00000383820 SLAMF1Q13291 335 aa16.47■□□□□ 0.23
RPUSD3-201ENST00000383820 HSPB2Q16082 182 aa16.47■□□□□ 0.23
RPUSD3-201ENST00000383820 SPRED3Q2MJR0 410 aa16.47■□□□□ 0.23
RPUSD3-201ENST00000383820 CAPN12Q6ZSI9 719 aa16.47■□□□□ 0.23
RPUSD3-201ENST00000383820 OR4N5Q8IXE1 308 aa16.47■□□□□ 0.23
RPUSD3-201ENST00000383820 ST13P4Q8IZP2 240 aaPredicted RBP16.47■□□□□ 0.23
RPUSD3-201ENST00000383820 ZCCHC7Q8N3Z6 543 aaKnown RBP16.47■□□□□ 0.23
RPUSD3-201ENST00000383820 CHDHQ8NE62 594 aaPredicted RBP16.47■□□□□ 0.23
RPUSD3-201ENST00000383820 NEIL3Q8TAT5 605 aa16.47■□□□□ 0.23
RPUSD3-201ENST00000383820 UBTD2Q8WUN7 234 aa16.47■□□□□ 0.23
RPUSD3-201ENST00000383820 RGMAQ96B86 450 aa16.47■□□□□ 0.23
RPUSD3-201ENST00000383820 CNPPD1Q9BV87 410 aa16.47■□□□□ 0.23
RPUSD3-201ENST00000383820 PRM3Q9NNZ6 103 aa16.47■□□□□ 0.23
RPUSD3-201ENST00000383820 TRMT1Q9NXH9 659 aaKnown RBP16.47■□□□□ 0.23
RPUSD3-201ENST00000383820 ALKBH4Q9NXW9 302 aa16.47■□□□□ 0.23
RPUSD3-201ENST00000383820 OPTCQ9UBM4 332 aa16.47■□□□□ 0.23
RPUSD3-201ENST00000383820 EDARQ9UNE0 448 aa16.47■□□□□ 0.23
RPUSD3-201ENST00000383820 SNX24Q9Y343 169 aa16.47■□□□□ 0.23
RPUSD3-201ENST00000383820 TSC22D4Q9Y3Q8 395 aa16.47■□□□□ 0.23
RPUSD3-201ENST00000383820 ITPR3Q14573 2671 aa16.47■□□□□ 0.23
RPUSD3-201ENST00000383820 ZFHX3Q15911 3703 aa16.46■□□□□ 0.23
RPUSD3-201ENST00000383820 FAM159BA6NKW6 160 aa16.46■□□□□ 0.23
RPUSD3-201ENST00000383820 K7EPI3 171 aa16.46■□□□□ 0.23
RPUSD3-201ENST00000383820 FBXO45P0C2W1 286 aa16.46■□□□□ 0.23
RPUSD3-201ENST00000383820 RFPL3SP0C7P2 107 aa16.46■□□□□ 0.23
RPUSD3-201ENST00000383820 ALOX15P16050 662 aaPredicted RBP16.46■□□□□ 0.23
RPUSD3-201ENST00000383820 SERPINB3P29508 390 aa16.46■□□□□ 0.23
RPUSD3-201ENST00000383820 SPRP35270 261 aaPredicted RBP16.46■□□□□ 0.23
RPUSD3-201ENST00000383820 PIK3CBP42338 1070 aa16.46■□□□□ 0.23
RPUSD3-201ENST00000383820 PAFAH1B1P43034 410 aa16.46■□□□□ 0.23
RPUSD3-201ENST00000383820 TNFRSF17Q02223 184 aa16.46■□□□□ 0.23
RPUSD3-201ENST00000383820 GRHL2Q6ISB3 625 aa16.46■□□□□ 0.23
RPUSD3-201ENST00000383820 SLC29A4Q7RTT9 530 aa16.46■□□□□ 0.23
RPUSD3-201ENST00000383820 WDR53Q7Z5U6 358 aaPredicted RBP16.46■□□□□ 0.23
RPUSD3-201ENST00000383820 GPR180Q86V85 440 aa16.46■□□□□ 0.23
RPUSD3-201ENST00000383820 ULK2Q8IYT8 1036 aa16.46■□□□□ 0.23
RPUSD3-201ENST00000383820 NRGNQ92686 78 aa16.46■□□□□ 0.23
RPUSD3-201ENST00000383820 EXT2Q93063 718 aa16.46■□□□□ 0.23
RPUSD3-201ENST00000383820 POLDIP3Q9BY77 421 aaKnown RBP16.46■□□□□ 0.23
RPUSD3-201ENST00000383820 OR51B5Q9H339 312 aa16.46■□□□□ 0.23
RPUSD3-201ENST00000383820 NMRAL1Q9HBL8 299 aa16.46■□□□□ 0.23
RPUSD3-201ENST00000383820 PROK2Q9HC23 129 aa16.46■□□□□ 0.23
RPUSD3-201ENST00000383820 RNF14Q9UBS8 474 aa16.46■□□□□ 0.23
RPUSD3-201ENST00000383820 SAR1BQ9Y6B6 198 aa16.46■□□□□ 0.23
RPUSD3-201ENST00000383820 CHCHD2Q9Y6H1 151 aaPredicted RBP16.46■□□□□ 0.23
RPUSD3-201ENST00000383820 IQANK1A0A1B0GTG1 560 aa16.45■□□□□ 0.22
RPUSD3-201ENST00000383820 TCRBV9S1A1TA0A576 114 aa16.45■□□□□ 0.22
RPUSD3-201ENST00000383820 ANKRD33BA6NCL7 494 aa16.45■□□□□ 0.22
RPUSD3-201ENST00000383820 LRRC3CA6NJW4 275 aa16.45■□□□□ 0.22
RPUSD3-201ENST00000383820 OR6C76A6NM76 312 aa16.45■□□□□ 0.22
RPUSD3-201ENST00000383820 SYT5O00445 386 aa16.45■□□□□ 0.22
RPUSD3-201ENST00000383820 GSTA2P09210 222 aa16.45■□□□□ 0.22
RPUSD3-201ENST00000383820 GALNSP34059 522 aa16.45■□□□□ 0.22
RPUSD3-201ENST00000383820 BUD31P41223 144 aaPredicted RBP16.45■□□□□ 0.22
RPUSD3-201ENST00000383820 KIR2DL3P43628 341 aa16.45■□□□□ 0.22
RPUSD3-201ENST00000383820 RAP1GDS1P52306 607 aa16.45■□□□□ 0.22
RPUSD3-201ENST00000383820 TBCELQ5QJ74 424 aa16.45■□□□□ 0.22
RPUSD3-201ENST00000383820 GRTP1Q5TC63 336 aa16.45■□□□□ 0.22
RPUSD3-201ENST00000383820 PRAMEF20Q5VT98 475 aa16.45■□□□□ 0.22
RPUSD3-201ENST00000383820 DGAT2L6Q6ZPD8 337 aa16.45■□□□□ 0.22
RPUSD3-201ENST00000383820 ISCA2Q86U28 154 aa16.45■□□□□ 0.22
RPUSD3-201ENST00000383820 TGIF2LYQ8IUE0 185 aa16.45■□□□□ 0.22
RPUSD3-201ENST00000383820 ZZZ3Q8IYH5 903 aa16.45■□□□□ 0.22
RPUSD3-201ENST00000383820 FAM13CQ8NE31 585 aa16.45■□□□□ 0.22
RPUSD3-201ENST00000383820 PPWD1Q96BP3 646 aaKnown RBP16.45■□□□□ 0.22
RPUSD3-201ENST00000383820 LRRC46Q96FV0 321 aa16.45■□□□□ 0.22
RPUSD3-201ENST00000383820 POM121Q96HA1 1249 aa16.45■□□□□ 0.22
RPUSD3-201ENST00000383820 ATOH8Q96SQ7 321 aa16.45■□□□□ 0.22
RPUSD3-201ENST00000383820 ALG9Q9H6U8 611 aa16.45■□□□□ 0.22
RPUSD3-201ENST00000383820 SAYSD1Q9NPB0 183 aa16.45■□□□□ 0.22
RPUSD3-201ENST00000383820 RASSF1Q9NS23 344 aa16.45■□□□□ 0.22
RPUSD3-201ENST00000383820 ZNF358Q9NW07 568 aa16.45■□□□□ 0.22
RPUSD3-201ENST00000383820 ST6GALNAC2Q9UJ37 374 aa16.45■□□□□ 0.22
RPUSD3-201ENST00000383820 CNOT11Q9UKZ1 510 aaKnown RBP16.45■□□□□ 0.22
RPUSD3-201ENST00000383820 AHRRA9YTQ3 701 aa16.44■□□□□ 0.22
RPUSD3-201ENST00000383820 HRKO00198 91 aa16.44■□□□□ 0.22
RPUSD3-201ENST00000383820 SAP18O00422 153 aaKnown RBP16.44■□□□□ 0.22
RPUSD3-201ENST00000383820 PLPP1O14494 284 aa16.44■□□□□ 0.22
RPUSD3-201ENST00000383820 KERAO60938 352 aa16.44■□□□□ 0.22
RPUSD3-201ENST00000383820 SH3BGRLO75368 114 aa16.44■□□□□ 0.22
RPUSD3-201ENST00000383820 GPR75O95800 540 aa16.44■□□□□ 0.22
RPUSD3-201ENST00000383820 C1QAP02745 245 aa16.44■□□□□ 0.22
RPUSD3-201ENST00000383820 EPB42P16452 691 aa16.44■□□□□ 0.22
RPUSD3-201ENST00000383820 SLC37A1P57057 533 aa16.44■□□□□ 0.22
RPUSD3-201ENST00000383820 HERVK_113P63132 956 aa16.44■□□□□ 0.22
RPUSD3-201ENST00000383820 ERVK-8P63133 956 aa16.44■□□□□ 0.22
RPUSD3-201ENST00000383820 CALCOCO2Q13137 446 aa16.44■□□□□ 0.22
RPUSD3-201ENST00000383820 NTRK2Q16620 822 aa16.44■□□□□ 0.22
RPUSD3-201ENST00000383820 FBXL19-AS1Q494R0 122 aa16.44■□□□□ 0.22
RPUSD3-201ENST00000383820 RNF111Q6ZNA4 994 aa16.44■□□□□ 0.22
RPUSD3-201ENST00000383820 LIX1Q8N485 282 aa16.44■□□□□ 0.22
RPUSD3-201ENST00000383820 OR10G3Q8NGC4 313 aa16.44■□□□□ 0.22
RPUSD3-201ENST00000383820 HUS1BQ8NHY5 278 aa16.44■□□□□ 0.22
RPUSD3-201ENST00000383820 SORBS1Q9BX66 1292 aaKnown RBP16.44■□□□□ 0.22
RPUSD3-201ENST00000383820 ERVK-6Q9BXR3 956 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms