RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 RHBDL2Q9NX52 303 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 NLGN3Q9NZ94 848 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 TAAR2Q9P1P5 351 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.34□□□□□ -1.23
CDKL5-202ENST00000379996 C3orf18Q9UK00 162 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 WDR37Q9Y2I8 494 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 ZNF99A8MXY4 864 aaPredicted RBP7.33□□□□□ -1.24
CDKL5-202ENST00000379996 PROB1E7EW31 1015 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 H0YIV9 168 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 SCAMP1O15126 338 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 CER1O95813 267 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 EDN3P14138 238 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 EPHA8P29322 1005 aaPredicted RBP7.33□□□□□ -1.24
CDKL5-202ENST00000379996 PKLRP30613 574 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 HALP42357 657 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 PREPP48147 710 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 PLIN5Q00G26 463 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 RELAQ04206 551 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 PPP1R8Q12972 351 aaKnown RBP7.33□□□□□ -1.24
CDKL5-202ENST00000379996 ABRQ12979 859 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 SQSTM1Q13501 440 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 VEZF1Q14119 521 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 CLCA4Q14CN2 919 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 VMACQ2NL98 169 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 EIF3MQ7L2H7 374 aaKnown RBP7.33□□□□□ -1.24
CDKL5-202ENST00000379996 ZDHHC21Q8IVQ6 265 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 SUMF1Q8NBK3 374 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 OR2L8Q8NGY9 312 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 SNIP1Q8TAD8 396 aaKnown RBP7.33□□□□□ -1.24
CDKL5-202ENST00000379996 PHF10Q8WUB8 498 aaKnown RBP7.33□□□□□ -1.24
CDKL5-202ENST00000379996 TSACCQ96A04 125 aaPredicted RBP7.33□□□□□ -1.24
CDKL5-202ENST00000379996 PYCR2Q96C36 320 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 COQ8BQ96D53 544 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 FAM210AQ96ND0 272 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 NODALQ96S42 347 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 ZBTB18Q99592 522 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 EPYCQ99645 322 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 TBCDQ9BTW9 1192 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 RSPO3Q9BXY4 272 aaPredicted RBP7.33□□□□□ -1.24
CDKL5-202ENST00000379996 PITHD1Q9GZP4 211 aaPredicted RBP7.33□□□□□ -1.24
CDKL5-202ENST00000379996 EHD1Q9H4M9 534 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 EXD2Q9NVH0 621 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 ERVK-18Q9QC07 812 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 TBC1D29Q9UFV1 150 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 PADI2Q9Y2J8 665 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 LILRA5A6NI73 299 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 BOLA2-SMG1P6H3BVE0 249 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 J3QRK9 145 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 AQP9O43315 295 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 XPNPEP2O43895 674 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 THBS1P07996 1170 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 SYPP08247 313 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 ADRA2AP08913 450 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 GIMD1P0DJR0 217 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 KRT20P35900 424 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 DHPSP49366 369 aaPredicted RBP7.33□□□□□ -1.24
CDKL5-202ENST00000379996 NEK2P51955 445 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 TCF15Q12870 199 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 GAB1Q13480 694 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 C10orf62Q5T681 223 aaPredicted RBP7.33□□□□□ -1.24
CDKL5-202ENST00000379996 OR2T5Q6IEZ7 315 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 NIPAL1Q6NVV3 410 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 GALNT18Q6P9A2 607 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 C19orf48Q6RUI8 117 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 ZNF605Q86T29 641 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 CARFQ8N187 725 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 TMEM132CQ8N3T6 1108 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 LILRA3Q8N6C8 439 aaPredicted RBP7.33□□□□□ -1.24
CDKL5-202ENST00000379996 GPR156Q8NFN8 814 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 OR6C4Q8NGE1 309 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 OR2T29Q8NH02 315 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 NDNFQ8TB73 568 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 APOBEC4Q8WW27 367 aaKnown RBP7.33□□□□□ -1.24
CDKL5-202ENST00000379996 TFGQ92734 400 aaPredicted RBP7.33□□□□□ -1.24
CDKL5-202ENST00000379996 FAM162AQ96A26 154 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 LRFN3Q9BTN0 628 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 THUMPD3Q9BV44 507 aaKnown RBP7.33□□□□□ -1.24
CDKL5-202ENST00000379996 DUSP23Q9BVJ7 150 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 PCBD2Q9H0N5 130 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 ACOT13Q9NPJ3 140 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 ANKMY1Q9P2S6 941 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 SAMD4AQ9UPU9 718 aaKnown RBP7.33□□□□□ -1.24
CDKL5-202ENST00000379996 PRICKLE3O43900 615 aaPredicted RBP7.33□□□□□ -1.24
CDKL5-202ENST00000379996 HIST1H2AGP0C0S8 130 aaPredicted RBP7.33□□□□□ -1.24
CDKL5-202ENST00000379996 HIST1H2ADP20671 130 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 FPR1P21462 350 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 IGFBP5P24593 272 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 BCAP31P51572 246 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 SPEM2Q0P670 501 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 SRSF5Q13243 272 aaKnown RBP7.33□□□□□ -1.24
CDKL5-202ENST00000379996 IRF3Q14653 427 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 PRSS53Q2L4Q9 553 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 PTCHD3Q3KNS1 767 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 LIPJQ5W064 366 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 OR4F3Q6IEY1 312 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 MRPL14Q6P1L8 145 aaKnown RBP7.33□□□□□ -1.24
CDKL5-202ENST00000379996 SLC9B2Q86UD5 537 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 ANKRD46Q86W74 232 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 GALNT12Q8IXK2 581 aa7.33□□□□□ -1.24
CDKL5-202ENST00000379996 ENTHD1Q8IYW4 607 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms