RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 PTCD3Q96EY7 689 aaKnown RBP16.33■□□□□ 0.2
PDLIM4-202ENST00000379018 PBKQ96KB5 322 aa16.33■□□□□ 0.2
PDLIM4-202ENST00000379018 ZNF597Q96LX8 424 aa16.33■□□□□ 0.2
PDLIM4-202ENST00000379018 TRIB1Q96RU8 372 aa16.33■□□□□ 0.2
PDLIM4-202ENST00000379018 NAP1L3Q99457 506 aaPredicted RBP16.33■□□□□ 0.2
PDLIM4-202ENST00000379018 ROGDIQ9GZN7 287 aa16.33■□□□□ 0.2
PDLIM4-202ENST00000379018 ACKR4Q9NPB9 350 aa16.33■□□□□ 0.2
PDLIM4-202ENST00000379018 GPRC5BQ9NZH0 403 aa16.33■□□□□ 0.2
PDLIM4-202ENST00000379018 SLC6A5Q9Y345 797 aa16.33■□□□□ 0.2
PDLIM4-202ENST00000379018 CHCHD2Q9Y6H1 151 aaPredicted RBP16.33■□□□□ 0.2
PDLIM4-202ENST00000379018 GOLGA6L10A0A0M3HER8 536 aa16.32■□□□□ 0.2
PDLIM4-202ENST00000379018 AHRRA9YTQ3 701 aa16.32■□□□□ 0.2
PDLIM4-202ENST00000379018 TAPBPO15533 448 aa16.32■□□□□ 0.2
PDLIM4-202ENST00000379018 EPPINO95925 133 aa16.32■□□□□ 0.2
PDLIM4-202ENST00000379018 TGFB1P01137 390 aa16.32■□□□□ 0.2
PDLIM4-202ENST00000379018 CD22P20273 847 aa16.32■□□□□ 0.2
PDLIM4-202ENST00000379018 CEACAM8P31997 349 aaPredicted RBP16.32■□□□□ 0.2
PDLIM4-202ENST00000379018 STT3AP46977 705 aa16.32■□□□□ 0.2
PDLIM4-202ENST00000379018 HERVK_113P63132 956 aa16.32■□□□□ 0.2
PDLIM4-202ENST00000379018 ERVK-8P63133 956 aa16.32■□□□□ 0.2
PDLIM4-202ENST00000379018 PLIN5Q00G26 463 aa16.32■□□□□ 0.2
PDLIM4-202ENST00000379018 CRYZQ08257 329 aaKnown RBP16.32■□□□□ 0.2
PDLIM4-202ENST00000379018 JMJD1CQ15652 2540 aa16.32■□□□□ 0.2
PDLIM4-202ENST00000379018 AP5B1Q2VPB7 878 aa16.32■□□□□ 0.2
PDLIM4-202ENST00000379018 BICRALQ6AI39 1079 aa16.32■□□□□ 0.2
PDLIM4-202ENST00000379018 SLC29A4Q7RTT9 530 aa16.32■□□□□ 0.2
PDLIM4-202ENST00000379018 ZC3HC1Q86WB0 502 aaKnown RBP16.32■□□□□ 0.2
PDLIM4-202ENST00000379018 KIF18BQ86Y91 864 aa16.32■□□□□ 0.2
PDLIM4-202ENST00000379018 DIO2Q92813 273 aa16.32■□□□□ 0.2
PDLIM4-202ENST00000379018 HSPBAP1Q96EW2 488 aa16.32■□□□□ 0.2
PDLIM4-202ENST00000379018 RBM18Q96H35 190 aaKnown RBP16.32■□□□□ 0.2
PDLIM4-202ENST00000379018 WDR83Q9BRX9 315 aaKnown RBP16.32■□□□□ 0.2
PDLIM4-202ENST00000379018 TBCDQ9BTW9 1192 aa16.32■□□□□ 0.2
PDLIM4-202ENST00000379018 ERVK-6Q9BXR3 956 aa16.32■□□□□ 0.2
PDLIM4-202ENST00000379018 CAPS2Q9BXY5 557 aa16.32■□□□□ 0.2
PDLIM4-202ENST00000379018 PITHD1Q9GZP4 211 aaPredicted RBP16.32■□□□□ 0.2
PDLIM4-202ENST00000379018 PLEKHF2Q9H8W4 249 aa16.32■□□□□ 0.2
PDLIM4-202ENST00000379018 FOXD3Q9UJU5 478 aaPredicted RBP16.32■□□□□ 0.2
PDLIM4-202ENST00000379018 ERVK-19Q9WJR5 959 aa16.32■□□□□ 0.2
PDLIM4-202ENST00000379018 FN1P02751 2386 aaKnown RBP16.31■□□□□ 0.2
PDLIM4-202ENST00000379018 IQANK1A0A1B0GTG1 560 aa16.31■□□□□ 0.2
PDLIM4-202ENST00000379018 CCNT2O60583 730 aaKnown RBP16.31■□□□□ 0.2
PDLIM4-202ENST00000379018 ACSL3O95573 720 aa16.31■□□□□ 0.2
PDLIM4-202ENST00000379018 FBXO45P0C2W1 286 aa16.31■□□□□ 0.2
PDLIM4-202ENST00000379018 SERPINB3P29508 390 aa16.31■□□□□ 0.2
PDLIM4-202ENST00000379018 MASP1P48740 699 aa16.31■□□□□ 0.2
PDLIM4-202ENST00000379018 FNTAP49354 379 aa16.31■□□□□ 0.2
PDLIM4-202ENST00000379018 NKX6-1P78426 367 aaPredicted RBP16.31■□□□□ 0.2
PDLIM4-202ENST00000379018 IRF8Q02556 426 aa16.31■□□□□ 0.2
PDLIM4-202ENST00000379018 CHIT1Q13231 466 aa16.31■□□□□ 0.2
PDLIM4-202ENST00000379018 ZNF267Q14586 743 aaPredicted RBP16.31■□□□□ 0.2
PDLIM4-202ENST00000379018 PDK4Q16654 411 aa16.31■□□□□ 0.2
PDLIM4-202ENST00000379018 HIST2H2ACQ16777 129 aaPredicted RBP16.31■□□□□ 0.2
PDLIM4-202ENST00000379018 FBXL19-AS1Q494R0 122 aa16.31■□□□□ 0.2
PDLIM4-202ENST00000379018 HIST2H2AA3Q6FI13 130 aa16.31■□□□□ 0.2
PDLIM4-202ENST00000379018 ZNF662Q6ZS27 426 aa16.31■□□□□ 0.2
PDLIM4-202ENST00000379018 PDIK1LQ8N165 341 aa16.31■□□□□ 0.2
PDLIM4-202ENST00000379018 SRFBP1Q8NEF9 429 aaKnown RBP16.31■□□□□ 0.2
PDLIM4-202ENST00000379018 NUDT8Q8WV74 236 aa16.31■□□□□ 0.2
PDLIM4-202ENST00000379018 ANKRD7Q92527 254 aa16.31■□□□□ 0.2
PDLIM4-202ENST00000379018 VPS39Q96JC1 886 aa16.31■□□□□ 0.2
PDLIM4-202ENST00000379018 ART5Q96L15 291 aa16.31■□□□□ 0.2
PDLIM4-202ENST00000379018 TIMP4Q99727 224 aa16.31■□□□□ 0.2
PDLIM4-202ENST00000379018 EFCAB11Q9BUY7 163 aa16.31■□□□□ 0.2
PDLIM4-202ENST00000379018 MS4A8Q9BY19 250 aa16.31■□□□□ 0.2
PDLIM4-202ENST00000379018 PHACTR1Q9C0D0 580 aa16.31■□□□□ 0.2
PDLIM4-202ENST00000379018 CNOT10Q9H9A5 744 aaKnown RBP16.31■□□□□ 0.2
PDLIM4-202ENST00000379018 QPCTLQ9NXS2 382 aa16.31■□□□□ 0.2
PDLIM4-202ENST00000379018 CD274Q9NZQ7 290 aa16.31■□□□□ 0.2
PDLIM4-202ENST00000379018 CNIH4Q9P003 139 aa16.31■□□□□ 0.2
PDLIM4-202ENST00000379018 ZNF629Q9UEG4 869 aaPredicted RBP16.31■□□□□ 0.2
PDLIM4-202ENST00000379018 CNOT11Q9UKZ1 510 aaKnown RBP16.31■□□□□ 0.2
PDLIM4-202ENST00000379018 MED12Q93074 2177 aa16.31■□□□□ 0.2
PDLIM4-202ENST00000379018 DOCK7Q96N67 2140 aa16.31■□□□□ 0.2
PDLIM4-202ENST00000379018 NSD1Q96L73 2696 aaPredicted RBP16.31■□□□□ 0.2
PDLIM4-202ENST00000379018 OR10H2O60403 315 aa16.3■□□□□ 0.2
PDLIM4-202ENST00000379018 STK16O75716 305 aa16.3■□□□□ 0.2
PDLIM4-202ENST00000379018 PIAS1O75925 651 aa16.3■□□□□ 0.2
PDLIM4-202ENST00000379018 IGKV3-11P04433 115 aa16.3■□□□□ 0.2
PDLIM4-202ENST00000379018 HIST1H1TP22492 207 aaPredicted RBP16.3■□□□□ 0.2
PDLIM4-202ENST00000379018 PCSK6P29122 969 aa16.3■□□□□ 0.2
PDLIM4-202ENST00000379018 HOXC12P31275 282 aa16.3■□□□□ 0.2
PDLIM4-202ENST00000379018 TIMP3P35625 211 aa16.3■□□□□ 0.2
PDLIM4-202ENST00000379018 SLC12A2P55011 1212 aa16.3■□□□□ 0.2
PDLIM4-202ENST00000379018 TBL3Q12788 808 aaKnown RBP16.3■□□□□ 0.2
PDLIM4-202ENST00000379018 DDX39BQ13838 428 aaKnown RBP16.3■□□□□ 0.2
PDLIM4-202ENST00000379018 PAGE2BQ5JRK9 111 aa16.3■□□□□ 0.2
PDLIM4-202ENST00000379018 C18orf63Q68DL7 685 aa16.3■□□□□ 0.2
PDLIM4-202ENST00000379018 POMZP3Q6PJE2 187 aa16.3■□□□□ 0.2
PDLIM4-202ENST00000379018 RNF111Q6ZNA4 994 aa16.3■□□□□ 0.2
PDLIM4-202ENST00000379018 CAPN12Q6ZSI9 719 aa16.3■□□□□ 0.2
PDLIM4-202ENST00000379018 GPSM1Q86YR5 675 aa16.3■□□□□ 0.2
PDLIM4-202ENST00000379018 KRTAP1-3Q8IUG1 177 aa16.3■□□□□ 0.2
PDLIM4-202ENST00000379018 RNF175Q8N4F7 328 aa16.3■□□□□ 0.2
PDLIM4-202ENST00000379018 SLC15A4Q8N697 577 aa16.3■□□□□ 0.2
PDLIM4-202ENST00000379018 WWTR1Q9GZV5 400 aa16.3■□□□□ 0.2
PDLIM4-202ENST00000379018 DDX47Q9H0S4 455 aaKnown RBP16.3■□□□□ 0.2
PDLIM4-202ENST00000379018 OR51B5Q9H339 312 aa16.3■□□□□ 0.2
PDLIM4-202ENST00000379018 EHD1Q9H4M9 534 aa16.3■□□□□ 0.2
PDLIM4-202ENST00000379018 RPF2Q9H7B2 306 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms