RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 HCAR2Q8TDS4 363 aa8.42□□□□□ -1.06
LIG3-202ENST00000378526 MGLLQ99685 303 aa8.42□□□□□ -1.06
LIG3-202ENST00000378526 DUSP26Q9BV47 211 aa8.42□□□□□ -1.06
LIG3-202ENST00000378526 A0A0A6YYJ9 748 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 A0A1W2PP18 115 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 BANF1O75531 89 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 KNG1P01042 644 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 DHRS4L1P0CG22 281 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 GATMP50440 423 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 PPT1P50897 306 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 ERVK-16P61578 105 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 SPCS2Q15005 226 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 PTPAQ15257 358 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 PCGF3Q3KNV8 242 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 SLC43A2Q8N370 569 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 OR9I1Q8NGQ6 314 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 M1APQ8TC57 530 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 CXorf40AQ8TE69 158 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 TSPEARQ8WU66 669 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 HOXB13Q92826 284 aaPredicted RBP8.41□□□□□ -1.06
LIG3-202ENST00000378526 CELF1Q92879 486 aaKnown RBP8.41□□□□□ -1.06
LIG3-202ENST00000378526 BPIFA2Q96DR5 249 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 RRAGCQ9HB90 399 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 SLAMF7Q9NQ25 335 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 SLC2A6Q9UGQ3 507 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 OR2AG2A6NM03 316 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 ZNF736B4DX44 427 aaPredicted RBP8.41□□□□□ -1.06
LIG3-202ENST00000378526 KLF11O14901 512 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 B4GAT1O43505 415 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 TLL1O43897 1013 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 BRINP1O60477 761 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 STAG3L1P0CL83 205 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 NT5EP21589 574 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 HTR1BP28222 390 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 RPS14P62263 151 aaKnown RBP8.41□□□□□ -1.06
LIG3-202ENST00000378526 ZNF484Q5JVG2 852 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 FFAR4Q5NUL3 377 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 CLEC6AQ6EIG7 209 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 BTNL8Q6UX41 500 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 MON1BQ7L1V2 547 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 SLAIN1Q8ND83 568 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 MBD3L1Q8WWY6 194 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 LINC01599Q8WXQ3 324 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 FBXL20Q96IG2 436 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 SLC35A5Q9BS91 424 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 ADCY10Q96PN6 1610 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 LRRC10BA6NIK2 292 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 STAG3L3P0CL85 134 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 CPT2P23786 658 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 PRSS3P35030 304 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 MLLT3P42568 568 aaPredicted RBP8.41□□□□□ -1.06
LIG3-202ENST00000378526 MASP1P48740 699 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 ERVK-21P61565 698 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 GAS6Q14393 721 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 TNFAIP8L2Q6P589 184 aaPredicted RBP8.41□□□□□ -1.06
LIG3-202ENST00000378526 FAM156AQ8NDB6 213 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 NLGN2Q8NFZ4 835 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 OR2T33Q8NG76 320 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 GAB3Q8WWW8 586 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 ACKR4Q9NPB9 350 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 NOX1Q9Y5S8 564 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 CNTNAP5Q8WYK1 1306 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 CSF2RAP15509 400 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 KCNC4Q03721 635 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 MLC1Q15049 377 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 PROSER3Q2NL68 480 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 PDE12Q6L8Q7 609 aaKnown RBP8.41□□□□□ -1.06
LIG3-202ENST00000378526 SLC27A4Q6P1M0 643 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 TSPYL5Q86VY4 417 aaPredicted RBP8.41□□□□□ -1.06
LIG3-202ENST00000378526 ANKRD46Q86W74 232 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 LRRC28Q86X40 367 aaPredicted RBP8.41□□□□□ -1.06
LIG3-202ENST00000378526 TAS1R2Q8TE23 839 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 KREMEN1Q96MU8 473 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 CENPOQ9BU64 300 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 MROQ9BYG7 248 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 CWH43Q9H720 699 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 DCAF16Q9NXF7 216 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 GRHPRQ9UBQ7 328 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 EPHA6Q9UF33 1036 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 ITSN1Q15811 1721 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 H0Y8G0 127 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 TSFMP43897 325 aaKnown RBP8.41□□□□□ -1.06
LIG3-202ENST00000378526 CD81P60033 236 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 HSPB3Q12988 150 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 ESPNLQ6ZVH7 1005 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 GALNT10Q86SR1 603 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 TMPRSS12Q86WS5 348 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 SLC24A4Q8NFF2 622 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 WWTR1Q9GZV5 400 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 CHRDQ9H2X0 955 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 SLC32A1Q9H598 525 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 ACOXLQ9NUZ1 547 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 ENPP5Q9UJA9 477 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 ENDOD1O94919 500 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 CBLP22681 906 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 FCER1GP30273 86 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 NUDT6P53370 316 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 GDPD4Q6W3E5 623 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 CRAMP1Q96RY5 1269 aa8.41□□□□□ -1.06
LIG3-202ENST00000378526 RAB11FIP5Q9BXF6 653 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms