RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 NUDT13Q86X67 352 aa17.26■□□□□ 0.35
TDP2-202ENST00000378198 CELF5Q8N6W0 485 aaKnown RBP17.26■□□□□ 0.35
TDP2-202ENST00000378198 RAB8BQ92930 207 aa17.26■□□□□ 0.35
TDP2-202ENST00000378198 NXPE3Q969Y0 559 aa17.26■□□□□ 0.35
TDP2-202ENST00000378198 EFHD2Q96C19 240 aaPredicted RBP17.26■□□□□ 0.35
TDP2-202ENST00000378198 ZBED6CLQ96FA7 236 aaPredicted RBP17.26■□□□□ 0.35
TDP2-202ENST00000378198 PCBD2Q9H0N5 130 aa17.26■□□□□ 0.35
TDP2-202ENST00000378198 ABCG4Q9H172 646 aa17.26■□□□□ 0.35
TDP2-202ENST00000378198 ACAD8Q9UKU7 415 aa17.26■□□□□ 0.35
TDP2-202ENST00000378198 RPL36Q9Y3U8 105 aaKnown RBP17.26■□□□□ 0.35
TDP2-202ENST00000378198 PRRT4C9JH25 899 aa17.25■□□□□ 0.35
TDP2-202ENST00000378198 GPX5O75715 221 aa17.25■□□□□ 0.35
TDP2-202ENST00000378198 DNTTP04053 509 aa17.25■□□□□ 0.35
TDP2-202ENST00000378198 HNRNPA1P09651 372 aaKnown RBP eCLIP17.25■□□□□ 0.35
TDP2-202ENST00000378198 CD72P21854 359 aa17.25■□□□□ 0.35
TDP2-202ENST00000378198 CCR8P51685 355 aa17.25■□□□□ 0.35
TDP2-202ENST00000378198 XKP51811 444 aa17.25■□□□□ 0.35
TDP2-202ENST00000378198 DEF8Q6ZN54 512 aa17.25■□□□□ 0.35
TDP2-202ENST00000378198 GRASPQ7Z6J2 395 aaPredicted RBP17.25■□□□□ 0.35
TDP2-202ENST00000378198 KRT73Q86Y46 540 aa17.25■□□□□ 0.35
TDP2-202ENST00000378198 OR8J1Q8NGP2 316 aa17.25■□□□□ 0.35
TDP2-202ENST00000378198 ING5Q8WYH8 240 aa17.25■□□□□ 0.35
TDP2-202ENST00000378198 PITHD1Q9GZP4 211 aaPredicted RBP17.25■□□□□ 0.35
TDP2-202ENST00000378198 POLR2J3Q9H1A7 115 aaKnown RBP17.25■□□□□ 0.35
TDP2-202ENST00000378198 C3orf14Q9HBI5 128 aa17.25■□□□□ 0.35
TDP2-202ENST00000378198 DYRK4Q9NR20 520 aa17.25■□□□□ 0.35
TDP2-202ENST00000378198 ACSS1Q9NUB1 689 aaPredicted RBP17.25■□□□□ 0.35
TDP2-202ENST00000378198 EHD3Q9NZN3 535 aa17.25■□□□□ 0.35
TDP2-202ENST00000378198 TMEM98Q9Y2Y6 226 aa17.25■□□□□ 0.35
TDP2-202ENST00000378198 LSM2Q9Y333 95 aaKnown RBP17.25■□□□□ 0.35
TDP2-202ENST00000378198 PDZK1P1A8MUH7 402 aa17.25■□□□□ 0.35
TDP2-202ENST00000378198 ANHXE9PGG2 379 aa17.25■□□□□ 0.35
TDP2-202ENST00000378198 SEMA7AO75326 666 aa17.25■□□□□ 0.35
TDP2-202ENST00000378198 SLITRK5O94991 958 aa17.25■□□□□ 0.35
TDP2-202ENST00000378198 CEBPBP17676 345 aa17.25■□□□□ 0.35
TDP2-202ENST00000378198 TIE1P35590 1138 aa17.25■□□□□ 0.35
TDP2-202ENST00000378198 CCT3P49368 545 aaKnown RBP17.25■□□□□ 0.35
TDP2-202ENST00000378198 DGKEP52429 567 aa17.25■□□□□ 0.35
TDP2-202ENST00000378198 REEP5Q00765 189 aa17.25■□□□□ 0.35
TDP2-202ENST00000378198 ELAVL3Q14576 367 aaKnown RBP17.25■□□□□ 0.35
TDP2-202ENST00000378198 RNLSQ5VYX0 342 aa17.25■□□□□ 0.35
TDP2-202ENST00000378198 IL17RCQ8NAC3 791 aa17.25■□□□□ 0.35
TDP2-202ENST00000378198 FLCNQ8NFG4 579 aa17.25■□□□□ 0.35
TDP2-202ENST00000378198 OR5K2Q8NHB8 316 aa17.25■□□□□ 0.35
TDP2-202ENST00000378198 VANGL1Q8TAA9 524 aaPredicted RBP17.25■□□□□ 0.35
TDP2-202ENST00000378198 CXorf40AQ8TE69 158 aa17.25■□□□□ 0.35
TDP2-202ENST00000378198 EXOSC8Q96B26 276 aaKnown RBP17.25■□□□□ 0.35
TDP2-202ENST00000378198 ERLEC1Q96DZ1 483 aa17.25■□□□□ 0.35
TDP2-202ENST00000378198 COX14Q96I36 57 aa17.25■□□□□ 0.35
TDP2-202ENST00000378198 CEP19Q96LK0 163 aa17.25■□□□□ 0.35
TDP2-202ENST00000378198 LRRC3BQ96PB8 259 aa17.25■□□□□ 0.35
TDP2-202ENST00000378198 CCDC32Q9BV29 185 aa17.25■□□□□ 0.35
TDP2-202ENST00000378198 RSPO3Q9BXY4 272 aaPredicted RBP17.25■□□□□ 0.35
TDP2-202ENST00000378198 HHATLQ9HCP6 504 aa17.25■□□□□ 0.35
TDP2-202ENST00000378198 SEMA3GQ9NS98 782 aa17.25■□□□□ 0.35
TDP2-202ENST00000378198 SEC14L3Q9UDX4 400 aa17.25■□□□□ 0.35
TDP2-202ENST00000378198 PRKAB1Q9Y478 270 aa17.25■□□□□ 0.35
TDP2-202ENST00000378198 PCYT1BQ9Y5K3 369 aaPredicted RBP17.25■□□□□ 0.35
TDP2-202ENST00000378198 H3BN98 237 aa17.24■□□□□ 0.35
TDP2-202ENST00000378198 B4GALT2O60909 372 aa17.24■□□□□ 0.35
TDP2-202ENST00000378198 ENDOUP21128 410 aaKnown RBP17.24■□□□□ 0.35
TDP2-202ENST00000378198 ALDH6A1Q02252 535 aaKnown RBP17.24■□□□□ 0.35
TDP2-202ENST00000378198 MLC1Q15049 377 aa17.24■□□□□ 0.35
TDP2-202ENST00000378198 OCLNQ16625 522 aa17.24■□□□□ 0.35
TDP2-202ENST00000378198 PGBD2Q6P3X8 592 aa17.24■□□□□ 0.35
TDP2-202ENST00000378198 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.24■□□□□ 0.35
TDP2-202ENST00000378198 AKAP14Q86UN6 197 aa17.24■□□□□ 0.35
TDP2-202ENST00000378198 SLC34A3Q8N130 599 aa17.24■□□□□ 0.35
TDP2-202ENST00000378198 CLIP4Q8N3C7 705 aa17.24■□□□□ 0.35
TDP2-202ENST00000378198 CHAC2Q8WUX2 184 aa17.24■□□□□ 0.35
TDP2-202ENST00000378198 RGMAQ96B86 450 aa17.24■□□□□ 0.35
TDP2-202ENST00000378198 KCNS3Q9BQ31 491 aa17.24■□□□□ 0.35
TDP2-202ENST00000378198 MND1Q9BWT6 205 aa17.24■□□□□ 0.35
TDP2-202ENST00000378198 CRISPLD2Q9H0B8 497 aa17.24■□□□□ 0.35
TDP2-202ENST00000378198 CUEDC1Q9NWM3 386 aaPredicted RBP17.24■□□□□ 0.35
TDP2-202ENST00000378198 SEC14L4Q9UDX3 406 aa17.24■□□□□ 0.35
TDP2-202ENST00000378198 ADAM29Q9UKF5 820 aa17.24■□□□□ 0.35
TDP2-202ENST00000378198 SLC28A2O43868 658 aa17.24■□□□□ 0.35
TDP2-202ENST00000378198 CSO75390 466 aaKnown RBP17.24■□□□□ 0.35
TDP2-202ENST00000378198 SOX14O95416 240 aa17.24■□□□□ 0.35
TDP2-202ENST00000378198 APOA1P02647 267 aa17.24■□□□□ 0.35
TDP2-202ENST00000378198 EIF2S1P05198 315 aaKnown RBP17.24■□□□□ 0.35
TDP2-202ENST00000378198 SPNP16150 400 aa17.24■□□□□ 0.35
TDP2-202ENST00000378198 FEN1P39748 380 aaKnown RBP17.24■□□□□ 0.35
TDP2-202ENST00000378198 SPHARQ15513 63 aa17.24■□□□□ 0.35
TDP2-202ENST00000378198 ATAD3BQ5T9A4 648 aa17.24■□□□□ 0.35
TDP2-202ENST00000378198 MFSD4BQ5TF39 518 aa17.24■□□□□ 0.35
TDP2-202ENST00000378198 DESI1Q6ICB0 168 aa17.24■□□□□ 0.35
TDP2-202ENST00000378198 ETFBKMTQ8IXQ9 262 aa17.24■□□□□ 0.35
TDP2-202ENST00000378198 TRIM43Q96BQ3 446 aaPredicted RBP17.24■□□□□ 0.35
TDP2-202ENST00000378198 SLC30A2Q9BRI3 323 aa17.24■□□□□ 0.35
TDP2-202ENST00000378198 FUZQ9BT04 418 aa17.24■□□□□ 0.35
TDP2-202ENST00000378198 CNPPD1Q9BV87 410 aa17.24■□□□□ 0.35
TDP2-202ENST00000378198 ASPNQ9BXN1 380 aa17.24■□□□□ 0.35
TDP2-202ENST00000378198 SIAEQ9HAT2 523 aa17.24■□□□□ 0.35
TDP2-202ENST00000378198 LHX9Q9NQ69 397 aa17.24■□□□□ 0.35
TDP2-202ENST00000378198 DNAJC27Q9NZQ0 273 aa17.24■□□□□ 0.35
TDP2-202ENST00000378198 P2RX2Q9UBL9 471 aa17.24■□□□□ 0.35
TDP2-202ENST00000378198 KLHL3Q9UH77 587 aa17.24■□□□□ 0.35
TDP2-202ENST00000378198 KIAA0355O15063 1070 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms