RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 PNPOQ9NVS9 261 aa12.38□□□□□ -0.43
CKAP2-202ENST00000378034 TRPC5OSA6NMA1 111 aa12.37□□□□□ -0.43
CKAP2-202ENST00000378034 A8MUA0 341 aa12.37□□□□□ -0.43
CKAP2-202ENST00000378034 DYNC1I1O14576 645 aa12.37□□□□□ -0.43
CKAP2-202ENST00000378034 ASMTP46597 345 aa12.37□□□□□ -0.43
CKAP2-202ENST00000378034 XKP51811 444 aa12.37□□□□□ -0.43
CKAP2-202ENST00000378034 ID2Q02363 134 aa12.37□□□□□ -0.43
CKAP2-202ENST00000378034 PDCD2Q16342 344 aaPredicted RBP12.37□□□□□ -0.43
CKAP2-202ENST00000378034 LACTB2Q53H82 288 aaPredicted RBP12.37□□□□□ -0.43
CKAP2-202ENST00000378034 C6orf136Q5SQH8 315 aa12.37□□□□□ -0.43
CKAP2-202ENST00000378034 FAM71E1Q6IPT2 247 aa12.37□□□□□ -0.43
CKAP2-202ENST00000378034 H3F3CQ6NXT2 135 aa12.37□□□□□ -0.43
CKAP2-202ENST00000378034 ELP5Q8TE02 316 aa12.37□□□□□ -0.43
CKAP2-202ENST00000378034 PTPMT1Q8WUK0 201 aaPredicted RBP12.37□□□□□ -0.43
CKAP2-202ENST00000378034 TUBGCP3Q96CW5 907 aa12.37□□□□□ -0.43
CKAP2-202ENST00000378034 ART5Q96L15 291 aa12.37□□□□□ -0.43
CKAP2-202ENST00000378034 C7orf26Q96N11 449 aa12.37□□□□□ -0.43
CKAP2-202ENST00000378034 LMF1Q96S06 567 aa12.37□□□□□ -0.43
CKAP2-202ENST00000378034 HEY2Q9UBP5 337 aa12.37□□□□□ -0.43
CKAP2-202ENST00000378034 CACNA1GO43497 2377 aa12.37□□□□□ -0.43
CKAP2-202ENST00000378034 DOCK10Q96BY6 2186 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 C17orf105B2RV13 164 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 HDAC3O15379 428 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 OR10H2O60403 315 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 PEX11AO75192 247 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 ITGAMP11215 1152 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 PORP16435 677 aaPredicted RBP12.36□□□□□ -0.43
CKAP2-202ENST00000378034 CSNK2A2P19784 350 aaPredicted RBP12.36□□□□□ -0.43
CKAP2-202ENST00000378034 DDCP20711 480 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 ALDH9A1P49189 494 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 GPR143P51810 404 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 C2orf80Q0P641 193 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 LY6DQ14210 128 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 SPRED3Q2MJR0 410 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 CRLF3Q8IUI8 442 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 LGI4Q8N135 537 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 PIWIL2Q8TC59 973 aaKnown RBP12.36□□□□□ -0.43
CKAP2-202ENST00000378034 BRIX1Q8TDN6 353 aaKnown RBP12.36□□□□□ -0.43
CKAP2-202ENST00000378034 CKAP2Q8WWK9 683 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 PSMF1Q92530 271 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 TM9SF4Q92544 642 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 UCN3Q969E3 161 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 VMP1Q96GC9 406 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 ZNF764Q96H86 408 aaPredicted RBP12.36□□□□□ -0.43
CKAP2-202ENST00000378034 MAGEB18Q96M61 343 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 MEAF6Q9HAF1 191 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 KCNK13Q9HB14 408 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 TAS2R7Q9NYW3 318 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 TEKT2Q9UIF3 430 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 ZNF780BQ9Y6R6 833 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 ATP6AP2A0A1C7CYW4 349 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 WASHC1A8K0Z3 465 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 CDK2AP1O14519 115 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 ATP6AP2O75787 350 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 JUNP05412 331 aaKnown RBP12.36□□□□□ -0.43
CKAP2-202ENST00000378034 PRPS2P11908 318 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 CPMP14384 443 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 PCSK2P16519 638 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 SDC1P18827 310 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 SOX11P35716 441 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 CLCN2P51788 898 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 EMX2Q04743 252 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 IGFL2Q6UWQ7 119 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 IGFL3Q6UXB1 125 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 ISLR2Q6UXK2 745 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 RGS9BPQ6ZS82 235 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 FNDC5Q8NAU1 212 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 APCDD1LQ8NCL9 501 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 OR1N1Q8NGS0 311 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 SLC39A7Q92504 469 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 KLHL29Q96CT2 875 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 ZNF354BQ96LW1 612 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 SEMA4CQ9C0C4 833 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 GIMAP4Q9NUV9 329 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 ASIC5Q9NY37 505 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 UTS2RQ9UKP6 389 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 EIF3LQ9Y262 564 aaKnown RBP12.36□□□□□ -0.43
CKAP2-202ENST00000378034 TP53TG5Q9Y2B4 290 aa12.36□□□□□ -0.43
CKAP2-202ENST00000378034 IGSF10Q6WRI0 2623 aa12.35□□□□□ -0.43
CKAP2-202ENST00000378034 TBX19O60806 448 aa12.35□□□□□ -0.43
CKAP2-202ENST00000378034 ERAL1O75616 437 aaKnown RBP12.35□□□□□ -0.43
CKAP2-202ENST00000378034 ATP1B1P05026 303 aa12.35□□□□□ -0.43
CKAP2-202ENST00000378034 CELA2AP08217 269 aa12.35□□□□□ -0.43
CKAP2-202ENST00000378034 BCKDHAP12694 445 aa12.35□□□□□ -0.43
CKAP2-202ENST00000378034 DDX5P17844 614 aaKnown RBP12.35□□□□□ -0.43
CKAP2-202ENST00000378034 MFAP5Q13361 173 aa12.35□□□□□ -0.43
CKAP2-202ENST00000378034 RAPSNQ13702 412 aa12.35□□□□□ -0.43
CKAP2-202ENST00000378034 ASB18Q6ZVZ8 466 aa12.35□□□□□ -0.43
CKAP2-202ENST00000378034 MMP21Q8N119 569 aa12.35□□□□□ -0.43
CKAP2-202ENST00000378034 SLC5A8Q8N695 610 aa12.35□□□□□ -0.43
CKAP2-202ENST00000378034 RIT1Q92963 219 aa12.35□□□□□ -0.43
CKAP2-202ENST00000378034 NCLNQ969V3 563 aa12.35□□□□□ -0.43
CKAP2-202ENST00000378034 MTERF3Q96E29 417 aa12.35□□□□□ -0.43
CKAP2-202ENST00000378034 FBXL20Q96IG2 436 aa12.35□□□□□ -0.43
CKAP2-202ENST00000378034 NUF2Q9BZD4 464 aa12.35□□□□□ -0.43
CKAP2-202ENST00000378034 AKTIPQ9H8T0 292 aa12.35□□□□□ -0.43
CKAP2-202ENST00000378034 MIEF1Q9NQG6 463 aa12.35□□□□□ -0.43
CKAP2-202ENST00000378034 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.35□□□□□ -0.43
CKAP2-202ENST00000378034 NOP53Q9NZM5 478 aaKnown RBP12.35□□□□□ -0.43
CKAP2-202ENST00000378034 COPS7AQ9UBW8 275 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms