RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 GPRIN3Q6ZVF9 776 aa15.62■□□□□ 0.09
HMGN4-201ENST00000377575 METTL4Q8N3J2 472 aa15.62■□□□□ 0.09
HMGN4-201ENST00000377575 ZNF321PQ8N8H1 164 aa15.62■□□□□ 0.09
HMGN4-201ENST00000377575 CDYL2Q8N8U2 506 aa15.62■□□□□ 0.09
HMGN4-201ENST00000377575 ZNF721Q8TF20 911 aa15.62■□□□□ 0.09
HMGN4-201ENST00000377575 FBXL20Q96IG2 436 aa15.62■□□□□ 0.09
HMGN4-201ENST00000377575 RASL10BQ96S79 203 aa15.62■□□□□ 0.09
HMGN4-201ENST00000377575 PLEKHB1Q9UF11 243 aaPredicted RBP15.62■□□□□ 0.09
HMGN4-201ENST00000377575 CCDC151A5D8V7 595 aa15.61■□□□□ 0.09
HMGN4-201ENST00000377575 GLOD5A6NK44 160 aa15.61■□□□□ 0.09
HMGN4-201ENST00000377575 TMEM200CA6NKL6 621 aa15.61■□□□□ 0.09
HMGN4-201ENST00000377575 SMIM23A6NLE4 172 aa15.61■□□□□ 0.09
HMGN4-201ENST00000377575 WWP2O00308 870 aa15.61■□□□□ 0.09
HMGN4-201ENST00000377575 PPP6CO00743 305 aa15.61■□□□□ 0.09
HMGN4-201ENST00000377575 CDH16O75309 829 aa15.61■□□□□ 0.09
HMGN4-201ENST00000377575 MYL2P10916 166 aa15.61■□□□□ 0.09
HMGN4-201ENST00000377575 PIK3R1P27986 724 aa15.61■□□□□ 0.09
HMGN4-201ENST00000377575 HMOX2P30519 316 aa15.61■□□□□ 0.09
HMGN4-201ENST00000377575 GALNSP34059 522 aa15.61■□□□□ 0.09
HMGN4-201ENST00000377575 MEOX1P50221 254 aa15.61■□□□□ 0.09
HMGN4-201ENST00000377575 MAPK12P53778 367 aa15.61■□□□□ 0.09
HMGN4-201ENST00000377575 CASP6P55212 293 aa15.61■□□□□ 0.09
HMGN4-201ENST00000377575 NAA20P61599 178 aa15.61■□□□□ 0.09
HMGN4-201ENST00000377575 SRSF11Q05519 484 aaKnown RBP15.61■□□□□ 0.09
HMGN4-201ENST00000377575 CSTF3Q12996 717 aaKnown RBP15.61■□□□□ 0.09
HMGN4-201ENST00000377575 LCP2Q13094 533 aa15.61■□□□□ 0.09
HMGN4-201ENST00000377575 CCDC153Q494R4 210 aa15.61■□□□□ 0.09
HMGN4-201ENST00000377575 C1QL3Q5VWW1 255 aa15.61■□□□□ 0.09
HMGN4-201ENST00000377575 COMMD6Q7Z4G1 85 aa15.61■□□□□ 0.09
HMGN4-201ENST00000377575 FJX1Q86VR8 437 aa15.61■□□□□ 0.09
HMGN4-201ENST00000377575 CPSF7Q8N684 471 aaKnown RBP15.61■□□□□ 0.09
HMGN4-201ENST00000377575 NUBPLQ8TB37 319 aa15.61■□□□□ 0.09
HMGN4-201ENST00000377575 PPWD1Q96BP3 646 aaKnown RBP15.61■□□□□ 0.09
HMGN4-201ENST00000377575 SENP5Q96HI0 755 aaPredicted RBP15.61■□□□□ 0.09
HMGN4-201ENST00000377575 MAGED4Q96JG8 741 aa15.61■□□□□ 0.09
HMGN4-201ENST00000377575 CNPPD1Q9BV87 410 aa15.61■□□□□ 0.09
HMGN4-201ENST00000377575 ANKZF1Q9H8Y5 726 aa15.61■□□□□ 0.09
HMGN4-201ENST00000377575 LIN28AQ9H9Z2 209 aaKnown RBP15.61■□□□□ 0.09
HMGN4-201ENST00000377575 FARSBQ9NSD9 589 aaKnown RBP15.61■□□□□ 0.09
HMGN4-201ENST00000377575 TEX10Q9NXF1 929 aaPredicted RBP15.61■□□□□ 0.09
HMGN4-201ENST00000377575 ZNF225Q9UK10 706 aa15.61■□□□□ 0.09
HMGN4-201ENST00000377575 A0A1W2PPM1 405 aa15.6■□□□□ 0.09
HMGN4-201ENST00000377575 A1L4Q6 167 aa15.6■□□□□ 0.09
HMGN4-201ENST00000377575 NPIPA5E9PKD4 350 aa15.6■□□□□ 0.09
HMGN4-201ENST00000377575 MANBAO00462 879 aa15.6■□□□□ 0.09
HMGN4-201ENST00000377575 OR6B1O95007 311 aa15.6■□□□□ 0.09
HMGN4-201ENST00000377575 IGKV3-11P04433 115 aa15.6■□□□□ 0.09
HMGN4-201ENST00000377575 ENO1P06733 434 aaKnown RBP15.6■□□□□ 0.09
HMGN4-201ENST00000377575 SLC35E2P0CK97 266 aa15.6■□□□□ 0.09
HMGN4-201ENST00000377575 SOX3P41225 446 aa15.6■□□□□ 0.09
HMGN4-201ENST00000377575 CCT5P48643 541 aa15.6■□□□□ 0.09
HMGN4-201ENST00000377575 PKNOX1P55347 436 aa15.6■□□□□ 0.09
HMGN4-201ENST00000377575 NDUFAF5Q5TEU4 345 aa15.6■□□□□ 0.09
HMGN4-201ENST00000377575 C6orf163Q5TEZ5 329 aa15.6■□□□□ 0.09
HMGN4-201ENST00000377575 OPN5Q6U736 354 aa15.6■□□□□ 0.09
HMGN4-201ENST00000377575 IL20RBQ6UXL0 311 aa15.6■□□□□ 0.09
HMGN4-201ENST00000377575 ZYG11AQ6WRX3 759 aa15.6■□□□□ 0.09
HMGN4-201ENST00000377575 RNF111Q6ZNA4 994 aa15.6■□□□□ 0.09
HMGN4-201ENST00000377575 C16orf47Q6ZP98 133 aaPredicted RBP15.6■□□□□ 0.09
HMGN4-201ENST00000377575 SLC29A4Q7RTT9 530 aa15.6■□□□□ 0.09
HMGN4-201ENST00000377575 SIAH3Q8IW03 269 aa15.6■□□□□ 0.09
HMGN4-201ENST00000377575 SULF2Q8IWU5 870 aa15.6■□□□□ 0.09
HMGN4-201ENST00000377575 PSD4Q8NDX1 1056 aa15.6■□□□□ 0.09
HMGN4-201ENST00000377575 SLC22A8Q8TCC7 542 aa15.6■□□□□ 0.09
HMGN4-201ENST00000377575 EPS8L3Q8TE67 593 aaKnown RBP15.6■□□□□ 0.09
HMGN4-201ENST00000377575 RIT1Q92963 219 aa15.6■□□□□ 0.09
HMGN4-201ENST00000377575 RELTQ969Z4 430 aa15.6■□□□□ 0.09
HMGN4-201ENST00000377575 TSPAN10Q9H1Z9 355 aaPredicted RBP15.6■□□□□ 0.09
HMGN4-201ENST00000377575 RYDENQ9NUL5 291 aaKnown RBP15.6■□□□□ 0.09
HMGN4-201ENST00000377575 SUCOQ9UBS9 1254 aaKnown RBP15.6■□□□□ 0.09
HMGN4-201ENST00000377575 NPIPA1Q9UND3 350 aa15.6■□□□□ 0.09
HMGN4-201ENST00000377575 CROCCQ5TZA2 2017 aa15.6■□□□□ 0.09
HMGN4-201ENST00000377575 EML6Q6ZMW3 1958 aa15.59■□□□□ 0.09
HMGN4-201ENST00000377575 TRGV8A0A0C4DH27 118 aa15.59■□□□□ 0.09
HMGN4-201ENST00000377575 TFECO14948 347 aaPredicted RBP15.59■□□□□ 0.09
HMGN4-201ENST00000377575 PEX1O43933 1283 aa15.59■□□□□ 0.09
HMGN4-201ENST00000377575 SLC19A2O60779 497 aa15.59■□□□□ 0.09
HMGN4-201ENST00000377575 ULK1O75385 1050 aa15.59■□□□□ 0.09
HMGN4-201ENST00000377575 ERVK-8P63133 956 aa15.59■□□□□ 0.09
HMGN4-201ENST00000377575 GALNT1Q10472 559 aaPredicted RBP15.59■□□□□ 0.09
HMGN4-201ENST00000377575 MPEG1Q2M385 716 aa15.59■□□□□ 0.09
HMGN4-201ENST00000377575 DGAT2L6Q6ZPD8 337 aa15.59■□□□□ 0.09
HMGN4-201ENST00000377575 RTL4Q6ZR62 310 aa15.59■□□□□ 0.09
HMGN4-201ENST00000377575 MAMDC2Q7Z304 686 aaPredicted RBP15.59■□□□□ 0.09
HMGN4-201ENST00000377575 MDGA2Q7Z553 956 aa15.59■□□□□ 0.09
HMGN4-201ENST00000377575 C9orf40Q8IXQ3 194 aa15.59■□□□□ 0.09
HMGN4-201ENST00000377575 GHDCQ8N2G8 530 aa15.59■□□□□ 0.09
HMGN4-201ENST00000377575 GOLM1Q8NBJ4 401 aa15.59■□□□□ 0.09
HMGN4-201ENST00000377575 OR4K14Q8NGD5 310 aa15.59■□□□□ 0.09
HMGN4-201ENST00000377575 RDH11Q8TC12 318 aa15.59■□□□□ 0.09
HMGN4-201ENST00000377575 METTL6Q8TCB7 284 aa15.59■□□□□ 0.09
HMGN4-201ENST00000377575 SREK1Q8WXA9 508 aaKnown RBP15.59■□□□□ 0.09
HMGN4-201ENST00000377575 HBEGFQ99075 208 aa15.59■□□□□ 0.09
HMGN4-201ENST00000377575 VPS29Q9UBQ0 182 aa15.59■□□□□ 0.09
HMGN4-201ENST00000377575 EMCNQ9ULC0 261 aa15.59■□□□□ 0.09
HMGN4-201ENST00000377575 GRID1Q9ULK0 1009 aa15.59■□□□□ 0.09
HMGN4-201ENST00000377575 ERVK-19Q9WJR5 959 aa15.59■□□□□ 0.09
HMGN4-201ENST00000377575 C1orf226A1L170 272 aa15.58■□□□□ 0.08
HMGN4-201ENST00000377575 GOLGA6L10A6NI86 522 aa15.58■□□□□ 0.08
HMGN4-201ENST00000377575 OR6C76A6NM76 312 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms