RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 K7EPI3 171 aa13.76□□□□□ -0.21
CLCN6-204ENST00000376491 EIF3HO15372 352 aaKnown RBP eCLIP13.76□□□□□ -0.21
CLCN6-204ENST00000376491 HCN1O60741 890 aa13.76□□□□□ -0.21
CLCN6-204ENST00000376491 KRT38O76015 456 aa13.76□□□□□ -0.21
CLCN6-204ENST00000376491 MTHFD2P13995 350 aa13.76□□□□□ -0.21
CLCN6-204ENST00000376491 COX7A2P14406 83 aa13.76□□□□□ -0.21
CLCN6-204ENST00000376491 CD1EP15812 388 aa13.76□□□□□ -0.21
CLCN6-204ENST00000376491 PAFAH1B1P43034 410 aa13.76□□□□□ -0.21
CLCN6-204ENST00000376491 SNTB1Q13884 538 aaKnown RBP13.76□□□□□ -0.21
CLCN6-204ENST00000376491 WLSQ5T9L3 541 aa13.76□□□□□ -0.21
CLCN6-204ENST00000376491 GRHL2Q6ISB3 625 aa13.76□□□□□ -0.21
CLCN6-204ENST00000376491 SEM1Q6ZVN7 128 aa13.76□□□□□ -0.21
CLCN6-204ENST00000376491 HUS1BQ8NHY5 278 aa13.76□□□□□ -0.21
CLCN6-204ENST00000376491 SLC22A8Q8TCC7 542 aa13.76□□□□□ -0.21
CLCN6-204ENST00000376491 RBM18Q96H35 190 aaKnown RBP13.76□□□□□ -0.21
CLCN6-204ENST00000376491 FBXL20Q96IG2 436 aa13.76□□□□□ -0.21
CLCN6-204ENST00000376491 ZNF717Q9BY31 904 aaPredicted RBP13.76□□□□□ -0.21
CLCN6-204ENST00000376491 EXO5Q9H790 373 aa13.76□□□□□ -0.21
CLCN6-204ENST00000376491 PRM3Q9NNZ6 103 aa13.76□□□□□ -0.21
CLCN6-204ENST00000376491 IGSF5Q9NSI5 407 aa13.76□□□□□ -0.21
CLCN6-204ENST00000376491 GRHL1Q9NZI5 618 aa13.76□□□□□ -0.21
CLCN6-204ENST00000376491 WHRNQ9P202 907 aa13.76□□□□□ -0.21
CLCN6-204ENST00000376491 OPTCQ9UBM4 332 aa13.76□□□□□ -0.21
CLCN6-204ENST00000376491 EXPH5Q8NEV8 1989 aa13.75□□□□□ -0.21
CLCN6-204ENST00000376491 KIAA1549Q9HCM3 1950 aa13.75□□□□□ -0.21
CLCN6-204ENST00000376491 SUPT3HB4E1H0 165 aa13.75□□□□□ -0.21
CLCN6-204ENST00000376491 PLPP1O14494 284 aa13.75□□□□□ -0.21
CLCN6-204ENST00000376491 KERAO60938 352 aa13.75□□□□□ -0.21
CLCN6-204ENST00000376491 SUPT3HO75486 399 aa13.75□□□□□ -0.21
CLCN6-204ENST00000376491 ALOX15P16050 662 aaPredicted RBP13.75□□□□□ -0.21
CLCN6-204ENST00000376491 SPRP35270 261 aaPredicted RBP13.75□□□□□ -0.21
CLCN6-204ENST00000376491 IST1P53990 364 aa13.75□□□□□ -0.21
CLCN6-204ENST00000376491 HERVK_113P63132 956 aa13.75□□□□□ -0.21
CLCN6-204ENST00000376491 ERVK-8P63133 956 aa13.75□□□□□ -0.21
CLCN6-204ENST00000376491 PLIN5Q00G26 463 aa13.75□□□□□ -0.21
CLCN6-204ENST00000376491 TNFRSF17Q02223 184 aa13.75□□□□□ -0.21
CLCN6-204ENST00000376491 DDX39BQ13838 428 aaKnown RBP13.75□□□□□ -0.21
CLCN6-204ENST00000376491 KBTBD12Q3ZCT8 623 aa13.75□□□□□ -0.21
CLCN6-204ENST00000376491 GRTP1Q5TC63 336 aa13.75□□□□□ -0.21
CLCN6-204ENST00000376491 GPR180Q86V85 440 aa13.75□□□□□ -0.21
CLCN6-204ENST00000376491 CTAGE3PQ8IX95 158 aa13.75□□□□□ -0.21
CLCN6-204ENST00000376491 LRRC25Q8N386 305 aaPredicted RBP13.75□□□□□ -0.21
CLCN6-204ENST00000376491 ZCCHC7Q8N3Z6 543 aaKnown RBP13.75□□□□□ -0.21
CLCN6-204ENST00000376491 SLC15A4Q8N697 577 aa13.75□□□□□ -0.21
CLCN6-204ENST00000376491 PPM1NQ8N819 430 aa13.75□□□□□ -0.21
CLCN6-204ENST00000376491 C7orf57Q8NEG2 295 aa13.75□□□□□ -0.21
CLCN6-204ENST00000376491 OR10G3Q8NGC4 313 aa13.75□□□□□ -0.21
CLCN6-204ENST00000376491 TANKQ92844 425 aa13.75□□□□□ -0.21
CLCN6-204ENST00000376491 UCN3Q969E3 161 aa13.75□□□□□ -0.21
CLCN6-204ENST00000376491 RGMAQ96B86 450 aa13.75□□□□□ -0.21
CLCN6-204ENST00000376491 NXNL1Q96CM4 212 aa13.75□□□□□ -0.21
CLCN6-204ENST00000376491 ERP44Q9BS26 406 aa13.75□□□□□ -0.21
CLCN6-204ENST00000376491 ERVK-6Q9BXR3 956 aa13.75□□□□□ -0.21
CLCN6-204ENST00000376491 SLC6A15Q9H2J7 730 aa13.75□□□□□ -0.21
CLCN6-204ENST00000376491 NMRAL1Q9HBL8 299 aa13.75□□□□□ -0.21
CLCN6-204ENST00000376491 ZFP64Q9NPA5 681 aa13.75□□□□□ -0.21
CLCN6-204ENST00000376491 DMRT3Q9NQL9 472 aa13.75□□□□□ -0.21
CLCN6-204ENST00000376491 MS4A12Q9NXJ0 267 aa13.75□□□□□ -0.21
CLCN6-204ENST00000376491 CNOT11Q9UKZ1 510 aaKnown RBP13.75□□□□□ -0.21
CLCN6-204ENST00000376491 ERVK-19Q9WJR5 959 aa13.75□□□□□ -0.21
CLCN6-204ENST00000376491 CHCHD2Q9Y6H1 151 aaPredicted RBP13.75□□□□□ -0.21
CLCN6-204ENST00000376491 ITPR3Q14573 2671 aa13.75□□□□□ -0.21
CLCN6-204ENST00000376491 ABCA4P78363 2273 aa13.74□□□□□ -0.21
CLCN6-204ENST00000376491 FAM187AA6NFU0 413 aa13.74□□□□□ -0.21
CLCN6-204ENST00000376491 PROM1O43490 865 aa13.74□□□□□ -0.21
CLCN6-204ENST00000376491 RAD51CO43502 376 aa13.74□□□□□ -0.21
CLCN6-204ENST00000376491 CTAG2O75638 210 aa13.74□□□□□ -0.21
CLCN6-204ENST00000376491 ZWINTO95229 277 aa13.74□□□□□ -0.21
CLCN6-204ENST00000376491 LRATO95237 230 aa13.74□□□□□ -0.21
CLCN6-204ENST00000376491 CLPSP04118 112 aa13.74□□□□□ -0.21
CLCN6-204ENST00000376491 LTA4HP09960 611 aaKnown RBP13.74□□□□□ -0.21
CLCN6-204ENST00000376491 FBXO45P0C2W1 286 aa13.74□□□□□ -0.21
CLCN6-204ENST00000376491 SERPINB1P30740 379 aa13.74□□□□□ -0.21
CLCN6-204ENST00000376491 RPS13P62277 151 aaKnown RBP13.74□□□□□ -0.21
CLCN6-204ENST00000376491 KCNJ2P63252 427 aa13.74□□□□□ -0.21
CLCN6-204ENST00000376491 BIKQ13323 160 aa13.74□□□□□ -0.21
CLCN6-204ENST00000376491 ZNF267Q14586 743 aaPredicted RBP13.74□□□□□ -0.21
CLCN6-204ENST00000376491 SPRED3Q2MJR0 410 aa13.74□□□□□ -0.21
CLCN6-204ENST00000376491 SLC25A35Q3KQZ1 300 aa13.74□□□□□ -0.21
CLCN6-204ENST00000376491 RIPPLY2Q5TAB7 128 aa13.74□□□□□ -0.21
CLCN6-204ENST00000376491 MRM1Q6IN84 353 aaKnown RBP13.74□□□□□ -0.21
CLCN6-204ENST00000376491 ARSKQ6UWY0 536 aa13.74□□□□□ -0.21
CLCN6-204ENST00000376491 RAPH1Q70E73 1250 aa13.74□□□□□ -0.21
CLCN6-204ENST00000376491 ST13P4Q8IZP2 240 aaPredicted RBP13.74□□□□□ -0.21
CLCN6-204ENST00000376491 FBXW8Q8N3Y1 598 aa13.74□□□□□ -0.21
CLCN6-204ENST00000376491 TEX9Q8N6V9 391 aa13.74□□□□□ -0.21
CLCN6-204ENST00000376491 ART5Q96L15 291 aa13.74□□□□□ -0.21
CLCN6-204ENST00000376491 GAL3ST4Q96RP7 486 aa13.74□□□□□ -0.21
CLCN6-204ENST00000376491 MTERF1Q99551 399 aaKnown RBP13.74□□□□□ -0.21
CLCN6-204ENST00000376491 LIME1Q9H400 295 aa13.74□□□□□ -0.21
CLCN6-204ENST00000376491 ACKR4Q9NPB9 350 aa13.74□□□□□ -0.21
CLCN6-204ENST00000376491 RNF14Q9UBS8 474 aa13.74□□□□□ -0.21
CLCN6-204ENST00000376491 ADGRE2Q9UHX3 823 aa13.74□□□□□ -0.21
CLCN6-204ENST00000376491 PHF11Q9UIL8 331 aa13.74□□□□□ -0.21
CLCN6-204ENST00000376491 BOKQ9UMX3 212 aaPredicted RBP13.74□□□□□ -0.21
CLCN6-204ENST00000376491 TSC22D4Q9Y3Q8 395 aa13.74□□□□□ -0.21
CLCN6-204ENST00000376491 ASB4Q9Y574 426 aa13.74□□□□□ -0.21
CLCN6-204ENST00000376491 MED12Q93074 2177 aa13.73□□□□□ -0.21
CLCN6-204ENST00000376491 A0A0A6YYD5 115 aa13.73□□□□□ -0.21
CLCN6-204ENST00000376491 A0A1W2PR48 441 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms