RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 EFCAB9A8MZ26 197 aa13.28□□□□□ -0.28
MSH5-202ENST00000375740 DNAJB5O75953 348 aa13.28□□□□□ -0.28
MSH5-202ENST00000375740 RRM2P31350 389 aa13.28□□□□□ -0.28
MSH5-202ENST00000375740 TGFBR2P37173 567 aa13.28□□□□□ -0.28
MSH5-202ENST00000375740 SLC35A2P78381 396 aa13.28□□□□□ -0.28
MSH5-202ENST00000375740 EEF1A2Q05639 463 aaKnown RBP13.28□□□□□ -0.28
MSH5-202ENST00000375740 RBBP4Q09028 425 aa13.28□□□□□ -0.28
MSH5-202ENST00000375740 SGCGQ13326 291 aa13.28□□□□□ -0.28
MSH5-202ENST00000375740 ZNF181Q2M3W8 571 aa13.28□□□□□ -0.28
MSH5-202ENST00000375740 ANKRD54Q6NXT1 300 aa13.28□□□□□ -0.28
MSH5-202ENST00000375740 PEX5LQ8IYB4 626 aa13.28□□□□□ -0.28
MSH5-202ENST00000375740 SLC6A17Q9H1V8 727 aa13.28□□□□□ -0.28
MSH5-202ENST00000375740 XKR8Q9H6D3 395 aa13.28□□□□□ -0.28
MSH5-202ENST00000375740 TMEM38AQ9H6F2 299 aa13.28□□□□□ -0.28
MSH5-202ENST00000375740 KRT84Q9NSB2 600 aa13.28□□□□□ -0.28
MSH5-202ENST00000375740 KIF17Q9P2E2 1029 aa13.28□□□□□ -0.28
MSH5-202ENST00000375740 PCDHGB3Q9Y5G1 929 aa13.28□□□□□ -0.28
MSH5-202ENST00000375740 GMPPBQ9Y5P6 360 aa13.28□□□□□ -0.28
MSH5-202ENST00000375740 CKAP5Q14008 2032 aa13.28□□□□□ -0.28
MSH5-202ENST00000375740 ZSCAN5BA6NJL1 495 aa13.28□□□□□ -0.28
MSH5-202ENST00000375740 AGRPO00253 132 aa13.28□□□□□ -0.28
MSH5-202ENST00000375740 OR1F1O43749 312 aa13.28□□□□□ -0.28
MSH5-202ENST00000375740 LCMT2O60294 686 aaKnown RBP13.28□□□□□ -0.28
MSH5-202ENST00000375740 DPM1O60762 260 aa13.28□□□□□ -0.28
MSH5-202ENST00000375740 CRYZL1O95825 349 aa13.28□□□□□ -0.28
MSH5-202ENST00000375740 CCDC159P0C7I6 412 aa13.28□□□□□ -0.28
MSH5-202ENST00000375740 DBTP11182 482 aaKnown RBP13.28□□□□□ -0.28
MSH5-202ENST00000375740 LAMP2P13473 410 aa13.28□□□□□ -0.28
MSH5-202ENST00000375740 EPHA2P29317 976 aa13.28□□□□□ -0.28
MSH5-202ENST00000375740 GRK3P35626 688 aa13.28□□□□□ -0.28
MSH5-202ENST00000375740 KIR2DL1P43626 348 aaPredicted RBP13.28□□□□□ -0.28
MSH5-202ENST00000375740 OR1E2P47887 323 aa13.28□□□□□ -0.28
MSH5-202ENST00000375740 ALDH9A1P49189 494 aa13.28□□□□□ -0.28
MSH5-202ENST00000375740 CDK6Q00534 326 aa13.28□□□□□ -0.28
MSH5-202ENST00000375740 REEP5Q00765 189 aa13.28□□□□□ -0.28
MSH5-202ENST00000375740 FADDQ13158 208 aa13.28□□□□□ -0.28
MSH5-202ENST00000375740 ZNF404Q494X3 552 aa13.28□□□□□ -0.28
MSH5-202ENST00000375740 ZNF776Q68DI1 518 aaPredicted RBP13.28□□□□□ -0.28
MSH5-202ENST00000375740 FAHD1Q6P587 224 aa13.28□□□□□ -0.28
MSH5-202ENST00000375740 SETD9Q8NE22 299 aa13.28□□□□□ -0.28
MSH5-202ENST00000375740 SUN5Q8TC36 379 aa13.28□□□□□ -0.28
MSH5-202ENST00000375740 EPYCQ99645 322 aa13.28□□□□□ -0.28
MSH5-202ENST00000375740 TRMT61BQ9BVS5 477 aaKnown RBP13.28□□□□□ -0.28
MSH5-202ENST00000375740 C1QTNF2Q9BXJ5 285 aa13.28□□□□□ -0.28
MSH5-202ENST00000375740 CXorf36Q9H7Y0 433 aa13.28□□□□□ -0.28
MSH5-202ENST00000375740 NDUFAF4Q9P032 175 aa13.28□□□□□ -0.28
MSH5-202ENST00000375740 ICKQ9UPZ9 632 aa13.28□□□□□ -0.28
MSH5-202ENST00000375740 SNX8Q9Y5X2 465 aa13.28□□□□□ -0.28
MSH5-202ENST00000375740 A0A1W2PQU0 124 aa13.27□□□□□ -0.28
MSH5-202ENST00000375740 GPR89AB7ZAQ6 455 aa13.27□□□□□ -0.28
MSH5-202ENST00000375740 ERVH48-1M5A8F1 160 aa13.27□□□□□ -0.28
MSH5-202ENST00000375740 SEMA3DO95025 777 aa13.27□□□□□ -0.28
MSH5-202ENST00000375740 GPR89BP0CG08 455 aa13.27□□□□□ -0.28
MSH5-202ENST00000375740 DDCP20711 480 aa13.27□□□□□ -0.28
MSH5-202ENST00000375740 TEAD1P28347 426 aa13.27□□□□□ -0.28
MSH5-202ENST00000375740 HTR3AP46098 478 aa13.27□□□□□ -0.28
MSH5-202ENST00000375740 RPS21P63220 83 aaKnown RBP13.27□□□□□ -0.28
MSH5-202ENST00000375740 KEAP1Q14145 624 aa13.27□□□□□ -0.28
MSH5-202ENST00000375740 CYP27C1Q4G0S4 372 aa13.27□□□□□ -0.28
MSH5-202ENST00000375740 ATAT1Q5SQI0 421 aa13.27□□□□□ -0.28
MSH5-202ENST00000375740 FAM124AQ86V42 546 aa13.27□□□□□ -0.28
MSH5-202ENST00000375740 C11orf74Q86VG3 221 aa13.27□□□□□ -0.28
MSH5-202ENST00000375740 OR14C36Q8NHC7 312 aa13.27□□□□□ -0.28
MSH5-202ENST00000375740 CAMK1GQ96NX5 476 aa13.27□□□□□ -0.28
MSH5-202ENST00000375740 MKRN2Q9H000 416 aaKnown RBP13.27□□□□□ -0.28
MSH5-202ENST00000375740 NT5DC2Q9H857 520 aa13.27□□□□□ -0.28
MSH5-202ENST00000375740 ACOT13Q9NPJ3 140 aa13.27□□□□□ -0.28
MSH5-202ENST00000375740 LHX9Q9NQ69 397 aa13.27□□□□□ -0.28
MSH5-202ENST00000375740 IMP3Q9NV31 184 aaKnown RBP13.27□□□□□ -0.28
MSH5-202ENST00000375740 C14orf119Q9NWQ9 140 aa13.27□□□□□ -0.28
MSH5-202ENST00000375740 REV3LO60673 3130 aa13.27□□□□□ -0.28
MSH5-202ENST00000375740 PRAMEF25A6NGN4 478 aa13.27□□□□□ -0.29
MSH5-202ENST00000375740 METTL15A6NJ78 407 aa13.27□□□□□ -0.29
MSH5-202ENST00000375740 PDZK1P1A8MUH7 402 aa13.27□□□□□ -0.29
MSH5-202ENST00000375740 CAPN5O15484 640 aaPredicted RBP13.27□□□□□ -0.29
MSH5-202ENST00000375740 CEACAM5P06731 702 aa13.27□□□□□ -0.29
MSH5-202ENST00000375740 UQCRC2P22695 453 aa13.27□□□□□ -0.29
MSH5-202ENST00000375740 LIPAP38571 399 aa13.27□□□□□ -0.29
MSH5-202ENST00000375740 ST13P50502 369 aaKnown RBP13.27□□□□□ -0.29
MSH5-202ENST00000375740 P2RX3P56373 397 aa13.27□□□□□ -0.29
MSH5-202ENST00000375740 HYAL1Q12794 435 aa13.27□□□□□ -0.29
MSH5-202ENST00000375740 CDK10Q15131 360 aa13.27□□□□□ -0.29
MSH5-202ENST00000375740 IFI44LQ53G44 452 aa13.27□□□□□ -0.29
MSH5-202ENST00000375740 CADM2Q8N3J6 435 aa13.27□□□□□ -0.29
MSH5-202ENST00000375740 SLC17A9Q9BYT1 436 aa13.27□□□□□ -0.29
MSH5-202ENST00000375740 IRF2BPLQ9H1B7 796 aa13.27□□□□□ -0.29
MSH5-202ENST00000375740 DUSP21Q9H596 190 aa13.27□□□□□ -0.29
MSH5-202ENST00000375740 SLAMF7Q9NQ25 335 aa13.27□□□□□ -0.29
MSH5-202ENST00000375740 TMEM184CQ9NVA4 438 aa13.27□□□□□ -0.29
MSH5-202ENST00000375740 PAQR5Q9NXK6 330 aaPredicted RBP13.27□□□□□ -0.29
MSH5-202ENST00000375740 PRELID1Q9Y255 219 aa13.27□□□□□ -0.29
MSH5-202ENST00000375740 MAU2Q9Y6X3 613 aa13.27□□□□□ -0.29
MSH5-202ENST00000375740 DSCR3O14972 297 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 SCAMP1O15126 338 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 PTTG1O95997 202 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 OR2B6P58173 313 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 CSNK1G2P78368 415 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 ZNF630Q2M218 657 aaPredicted RBP13.26□□□□□ -0.29
MSH5-202ENST00000375740 TPRG1LQ5T0D9 272 aa13.26□□□□□ -0.29
MSH5-202ENST00000375740 TMEM184AQ6ZMB5 413 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms