RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 TRIM69Q86WT6 500 aa13.81□□□□□ -0.2
MSH5-201ENST00000375703 TCEANCQ8N8B7 351 aa13.81□□□□□ -0.2
MSH5-201ENST00000375703 OTUB2Q96DC9 234 aa13.81□□□□□ -0.2
MSH5-201ENST00000375703 ZNF607Q96SK3 696 aa13.81□□□□□ -0.2
MSH5-201ENST00000375703 ZNF717Q9BY31 904 aaPredicted RBP13.81□□□□□ -0.2
MSH5-201ENST00000375703 RNF208Q9H0X6 261 aa13.81□□□□□ -0.2
MSH5-201ENST00000375703 SEMA3GQ9NS98 782 aa13.81□□□□□ -0.2
MSH5-201ENST00000375703 FBXL12Q9NXK8 326 aa13.81□□□□□ -0.2
MSH5-201ENST00000375703 ANHXE9PGG2 379 aa13.81□□□□□ -0.2
MSH5-201ENST00000375703 HMGN4O00479 90 aa13.81□□□□□ -0.2
MSH5-201ENST00000375703 CAPN5O15484 640 aaPredicted RBP13.81□□□□□ -0.2
MSH5-201ENST00000375703 B4GALT2O60909 372 aa13.81□□□□□ -0.2
MSH5-201ENST00000375703 FKTNO75072 461 aa13.81□□□□□ -0.2
MSH5-201ENST00000375703 SLITRK5O94991 958 aa13.81□□□□□ -0.2
MSH5-201ENST00000375703 CISD3P0C7P0 127 aa13.81□□□□□ -0.2
MSH5-201ENST00000375703 C6P13671 934 aa13.81□□□□□ -0.2
MSH5-201ENST00000375703 TNNI3P19429 210 aa13.81□□□□□ -0.2
MSH5-201ENST00000375703 NKX2-5P52952 324 aaPredicted RBP13.81□□□□□ -0.2
MSH5-201ENST00000375703 NTHL1P78549 312 aa13.81□□□□□ -0.2
MSH5-201ENST00000375703 DHCR24Q15392 516 aa13.81□□□□□ -0.2
MSH5-201ENST00000375703 TMEM201Q5SNT2 666 aa13.81□□□□□ -0.2
MSH5-201ENST00000375703 C12orf73Q69YU5 71 aa13.81□□□□□ -0.2
MSH5-201ENST00000375703 GDPGP1Q6ZNW5 385 aa13.81□□□□□ -0.2
MSH5-201ENST00000375703 WDR53Q7Z5U6 358 aaPredicted RBP13.81□□□□□ -0.2
MSH5-201ENST00000375703 BCDIN3DQ7Z5W3 292 aaKnown RBP13.81□□□□□ -0.2
MSH5-201ENST00000375703 ANKRD53Q8N9V6 530 aa13.81□□□□□ -0.2
MSH5-201ENST00000375703 OR4D11Q8NGI4 311 aa13.81□□□□□ -0.2
MSH5-201ENST00000375703 OR8J1Q8NGP2 316 aa13.81□□□□□ -0.2
MSH5-201ENST00000375703 ZNF296Q8WUU4 475 aaPredicted RBP13.81□□□□□ -0.2
MSH5-201ENST00000375703 SMPDL3AQ92484 453 aa13.81□□□□□ -0.2
MSH5-201ENST00000375703 EXOSC8Q96B26 276 aaKnown RBP13.81□□□□□ -0.2
MSH5-201ENST00000375703 NRTNQ99748 197 aa13.81□□□□□ -0.2
MSH5-201ENST00000375703 WFDC6Q9BQY6 131 aa13.81□□□□□ -0.2
MSH5-201ENST00000375703 MND1Q9BWT6 205 aa13.81□□□□□ -0.2
MSH5-201ENST00000375703 POLR2J2Q9GZM3 115 aaKnown RBP13.81□□□□□ -0.2
MSH5-201ENST00000375703 OR52A5Q9H2C5 316 aa13.81□□□□□ -0.2
MSH5-201ENST00000375703 RHBGQ9H310 441 aa13.81□□□□□ -0.2
MSH5-201ENST00000375703 SMURF1Q9HCE7 757 aa13.81□□□□□ -0.2
MSH5-201ENST00000375703 NEUROD4Q9HD90 331 aa13.81□□□□□ -0.2
MSH5-201ENST00000375703 SEC14L3Q9UDX4 400 aa13.81□□□□□ -0.2
MSH5-201ENST00000375703 TAC3Q9UHF0 121 aa13.81□□□□□ -0.2
MSH5-201ENST00000375703 WBP11Q9Y2W2 641 aaKnown RBP13.81□□□□□ -0.2
MSH5-201ENST00000375703 TMEM98Q9Y2Y6 226 aa13.81□□□□□ -0.2
MSH5-201ENST00000375703 HIDE1A8MVS5 230 aa13.8□□□□□ -0.2
MSH5-201ENST00000375703 SLC28A2O43868 658 aa13.8□□□□□ -0.2
MSH5-201ENST00000375703 SEMA3DO95025 777 aa13.8□□□□□ -0.2
MSH5-201ENST00000375703 RB1P06400 928 aa13.8□□□□□ -0.2
MSH5-201ENST00000375703 CRYBB2P43320 205 aa13.8□□□□□ -0.2
MSH5-201ENST00000375703 GSTM5P46439 218 aa13.8□□□□□ -0.2
MSH5-201ENST00000375703 RORCP51449 518 aa13.8□□□□□ -0.2
MSH5-201ENST00000375703 PRMT2P55345 433 aa13.8□□□□□ -0.2
MSH5-201ENST00000375703 SMIM11AP58511 58 aa13.8□□□□□ -0.2
MSH5-201ENST00000375703 ERVFC1P60507 584 aa13.8□□□□□ -0.2
MSH5-201ENST00000375703 CCDC92Q53HC0 331 aaPredicted RBP13.8□□□□□ -0.2
MSH5-201ENST00000375703 PGBD2Q6P3X8 592 aa13.8□□□□□ -0.2
MSH5-201ENST00000375703 ZNF765Q7L2R6 523 aa13.8□□□□□ -0.2
MSH5-201ENST00000375703 CACTIN-AS1Q8N1I8 211 aa13.8□□□□□ -0.2
MSH5-201ENST00000375703 NANOGP1Q8N7R0 232 aa13.8□□□□□ -0.2
MSH5-201ENST00000375703 TFGQ92734 400 aaPredicted RBP13.8□□□□□ -0.2
MSH5-201ENST00000375703 ARRDC3Q96B67 414 aa13.8□□□□□ -0.2
MSH5-201ENST00000375703 AIF1LQ9BQI0 150 aa13.8□□□□□ -0.2
MSH5-201ENST00000375703 TSSK6Q9BXA6 273 aa13.8□□□□□ -0.2
MSH5-201ENST00000375703 MS4A8Q9BY19 250 aa13.8□□□□□ -0.2
MSH5-201ENST00000375703 BARHL1Q9BZE3 327 aa13.8□□□□□ -0.2
MSH5-201ENST00000375703 SNTG1Q9NSN8 517 aa13.8□□□□□ -0.2
MSH5-201ENST00000375703 TVP23BQ9NYZ1 205 aa13.8□□□□□ -0.2
MSH5-201ENST00000375703 PCDH10Q9P2E7 1040 aa13.8□□□□□ -0.2
MSH5-201ENST00000375703 SEC14L4Q9UDX3 406 aa13.8□□□□□ -0.2
MSH5-201ENST00000375703 TRAPPC4Q9Y296 219 aa13.8□□□□□ -0.2
MSH5-201ENST00000375703 FEZF1A0PJY2 475 aa13.8□□□□□ -0.2
MSH5-201ENST00000375703 WWP2O00308 870 aa13.8□□□□□ -0.2
MSH5-201ENST00000375703 TBX19O60806 448 aa13.8□□□□□ -0.2
MSH5-201ENST00000375703 CYP7B1O75881 506 aa13.8□□□□□ -0.2
MSH5-201ENST00000375703 CSF2RAP15509 400 aa13.8□□□□□ -0.2
MSH5-201ENST00000375703 CXCR2P25025 360 aa13.8□□□□□ -0.2
MSH5-201ENST00000375703 OPRD1P41143 372 aa13.8□□□□□ -0.2
MSH5-201ENST00000375703 CCT3P49368 545 aaKnown RBP13.8□□□□□ -0.2
MSH5-201ENST00000375703 VASPP50552 380 aaPredicted RBP13.8□□□□□ -0.2
MSH5-201ENST00000375703 PCBP4P57723 403 aaKnown RBP13.8□□□□□ -0.2
MSH5-201ENST00000375703 TMC5Q6UXY8 1006 aa13.8□□□□□ -0.2
MSH5-201ENST00000375703 SLC7A13Q8TCU3 470 aa13.8□□□□□ -0.2
MSH5-201ENST00000375703 CHAC2Q8WUX2 184 aa13.8□□□□□ -0.2
MSH5-201ENST00000375703 RASSF5Q8WWW0 418 aa13.8□□□□□ -0.2
MSH5-201ENST00000375703 DHRS1Q96LJ7 313 aa13.8□□□□□ -0.2
MSH5-201ENST00000375703 RACGAP1Q9H0H5 632 aa13.8□□□□□ -0.2
MSH5-201ENST00000375703 SIRT3Q9NTG7 399 aaPredicted RBP13.8□□□□□ -0.2
MSH5-201ENST00000375703 PCYT1BQ9Y5K3 369 aaPredicted RBP13.8□□□□□ -0.2
MSH5-201ENST00000375703 HEPACAM2A8MVW5 462 aa13.79□□□□□ -0.2
MSH5-201ENST00000375703 VEGFDO43915 354 aa13.79□□□□□ -0.2
MSH5-201ENST00000375703 SSX4O60224 188 aa13.79□□□□□ -0.2
MSH5-201ENST00000375703 CCNKO75909 580 aa13.79□□□□□ -0.2
MSH5-201ENST00000375703 ACRP10323 421 aa13.79□□□□□ -0.2
MSH5-201ENST00000375703 ZNF24P17028 368 aa13.79□□□□□ -0.2
MSH5-201ENST00000375703 ZNF91Q05481 1191 aa13.79□□□□□ -0.2
MSH5-201ENST00000375703 PIN1Q13526 163 aaPredicted RBP13.79□□□□□ -0.2
MSH5-201ENST00000375703 C11orf96Q7Z7L8 435 aa13.79□□□□□ -0.2
MSH5-201ENST00000375703 CELF5Q8N6W0 485 aaKnown RBP13.79□□□□□ -0.2
MSH5-201ENST00000375703 PROKR2Q8NFJ6 384 aa13.79□□□□□ -0.2
MSH5-201ENST00000375703 XAGE5Q8WWM1 108 aa13.79□□□□□ -0.2
MSH5-201ENST00000375703 ZBED6CLQ96FA7 236 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms