RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 ALOX12P18054 663 aa16.18■□□□□ 0.18
RXRB-201ENST00000374680 EIF2B2P49770 351 aaKnown RBP16.18■□□□□ 0.18
RXRB-201ENST00000374680 CCR8P51685 355 aa16.18■□□□□ 0.18
RXRB-201ENST00000374680 CRISP1P54107 249 aa16.18■□□□□ 0.18
RXRB-201ENST00000374680 LASP1Q14847 261 aaKnown RBP16.18■□□□□ 0.18
RXRB-201ENST00000374680 TCTN3Q6NUS6 607 aa16.18■□□□□ 0.18
RXRB-201ENST00000374680 GPR65Q8IYL9 337 aa16.18■□□□□ 0.18
RXRB-201ENST00000374680 TMEM145Q8NBT3 493 aa16.18■□□□□ 0.18
RXRB-201ENST00000374680 WFIKKN2Q8TEU8 576 aa16.18■□□□□ 0.18
RXRB-201ENST00000374680 HPS1Q92902 700 aa16.18■□□□□ 0.18
RXRB-201ENST00000374680 METTL2AQ96IZ6 378 aaKnown RBP16.18■□□□□ 0.18
RXRB-201ENST00000374680 FAM83CQ9BQN1 747 aa16.18■□□□□ 0.18
RXRB-201ENST00000374680 MS4A8Q9BY19 250 aa16.18■□□□□ 0.18
RXRB-201ENST00000374680 KLHL25Q9H0H3 589 aa16.18■□□□□ 0.18
RXRB-201ENST00000374680 SERHL2Q9H4I8 314 aa16.18■□□□□ 0.18
RXRB-201ENST00000374680 EPHX3Q9H6B9 360 aa16.18■□□□□ 0.18
RXRB-201ENST00000374680 TMEM38AQ9H6F2 299 aa16.18■□□□□ 0.18
RXRB-201ENST00000374680 PLXNA2O75051 1894 aa16.18■□□□□ 0.18
RXRB-201ENST00000374680 CAPN5O15484 640 aaPredicted RBP16.18■□□□□ 0.18
RXRB-201ENST00000374680 CNOT3O75175 753 aaKnown RBP16.18■□□□□ 0.18
RXRB-201ENST00000374680 NFATC1O95644 943 aa16.18■□□□□ 0.18
RXRB-201ENST00000374680 BUD31P41223 144 aaPredicted RBP16.18■□□□□ 0.18
RXRB-201ENST00000374680 MLLT1Q03111 559 aaPredicted RBP16.18■□□□□ 0.18
RXRB-201ENST00000374680 RBBP4Q09028 425 aa16.18■□□□□ 0.18
RXRB-201ENST00000374680 HEPACAMQ14CZ8 416 aa16.18■□□□□ 0.18
RXRB-201ENST00000374680 C2orf27AQ580R0 203 aa16.18■□□□□ 0.18
RXRB-201ENST00000374680 CRB2Q5IJ48 1285 aa16.18■□□□□ 0.18
RXRB-201ENST00000374680 TMIEQ8NEW7 156 aa16.18■□□□□ 0.18
RXRB-201ENST00000374680 POP5Q969H6 163 aaKnown RBP16.18■□□□□ 0.18
RXRB-201ENST00000374680 UBE2E3Q969T4 207 aa16.18■□□□□ 0.18
RXRB-201ENST00000374680 ARSGQ96EG1 525 aa16.18■□□□□ 0.18
RXRB-201ENST00000374680 C16orf58Q96GQ5 468 aa16.18■□□□□ 0.18
RXRB-201ENST00000374680 SPATA9Q9BWV2 254 aa16.18■□□□□ 0.18
RXRB-201ENST00000374680 OR51I1Q9H343 314 aa16.18■□□□□ 0.18
RXRB-201ENST00000374680 TBCCD1Q9NVR7 557 aa16.18■□□□□ 0.18
RXRB-201ENST00000374680 SPATA7Q9P0W8 599 aa16.18■□□□□ 0.18
RXRB-201ENST00000374680 HMGN4O00479 90 aa16.18■□□□□ 0.18
RXRB-201ENST00000374680 ZSCAN9O15535 394 aaPredicted RBP16.18■□□□□ 0.18
RXRB-201ENST00000374680 HOXC11O43248 304 aaPredicted RBP16.18■□□□□ 0.18
RXRB-201ENST00000374680 PCBP3P57721 371 aaKnown RBP16.18■□□□□ 0.18
RXRB-201ENST00000374680 MXD1Q05195 221 aa16.18■□□□□ 0.18
RXRB-201ENST00000374680 ZNF404Q494X3 552 aa16.18■□□□□ 0.18
RXRB-201ENST00000374680 CADM3Q8N126 398 aa16.18■□□□□ 0.18
RXRB-201ENST00000374680 OR5K2Q8NHB8 316 aa16.18■□□□□ 0.18
RXRB-201ENST00000374680 SMPDL3AQ92484 453 aa16.18■□□□□ 0.18
RXRB-201ENST00000374680 ITFG2Q969R8 447 aa16.18■□□□□ 0.18
RXRB-201ENST00000374680 TMEM203Q969S6 136 aa16.18■□□□□ 0.18
RXRB-201ENST00000374680 COL26A1Q96A83 441 aa16.18■□□□□ 0.18
RXRB-201ENST00000374680 ARMC5Q96C12 935 aa16.18■□□□□ 0.18
RXRB-201ENST00000374680 CXorf40BQ96DE9 158 aa16.18■□□□□ 0.18
RXRB-201ENST00000374680 ZNF514Q96K75 400 aaPredicted RBP16.18■□□□□ 0.18
RXRB-201ENST00000374680 PHOX2BQ99453 314 aa16.18■□□□□ 0.18
RXRB-201ENST00000374680 CNPPD1Q9BV87 410 aa16.18■□□□□ 0.18
RXRB-201ENST00000374680 IFT52Q9Y366 437 aa16.18■□□□□ 0.18
RXRB-201ENST00000374680 CXorf51AA0A1B0GTR3 108 aa16.17■□□□□ 0.18
RXRB-201ENST00000374680 SYNDIG1LA6NDD5 238 aa16.17■□□□□ 0.18
RXRB-201ENST00000374680 A8MU76 341 aa16.17■□□□□ 0.18
RXRB-201ENST00000374680 DNAJB5O75953 348 aa16.17■□□□□ 0.18
RXRB-201ENST00000374680 RHCEP18577 417 aa16.17■□□□□ 0.18
RXRB-201ENST00000374680 TIE1P35590 1138 aa16.17■□□□□ 0.18
RXRB-201ENST00000374680 NCBP2P52298 156 aaKnown RBP eCLIP16.17■□□□□ 0.18
RXRB-201ENST00000374680 TAS2R38P59533 333 aa16.17■□□□□ 0.18
RXRB-201ENST00000374680 CBX3Q13185 183 aa16.17■□□□□ 0.18
RXRB-201ENST00000374680 DCST1Q5T197 706 aa16.17■□□□□ 0.18
RXRB-201ENST00000374680 NDUFAF5Q5TEU4 345 aa16.17■□□□□ 0.18
RXRB-201ENST00000374680 UBE2UQ5VVX9 321 aa16.17■□□□□ 0.18
RXRB-201ENST00000374680 LCTLQ6UWM7 567 aa16.17■□□□□ 0.18
RXRB-201ENST00000374680 UBE3DQ7Z6J8 389 aa16.17■□□□□ 0.18
RXRB-201ENST00000374680 CYP4Z2PQ8N1L4 340 aa16.17■□□□□ 0.18
RXRB-201ENST00000374680 POC5Q8NA72 575 aa16.17■□□□□ 0.18
RXRB-201ENST00000374680 SETD7Q8WTS6 366 aaKnown RBP16.17■□□□□ 0.18
RXRB-201ENST00000374680 ZG16BQ96DA0 208 aa16.17■□□□□ 0.18
RXRB-201ENST00000374680 WDR34Q96EX3 536 aa16.17■□□□□ 0.18
RXRB-201ENST00000374680 ASB16Q96NS5 453 aa16.17■□□□□ 0.18
RXRB-201ENST00000374680 BBS4Q96RK4 519 aa16.17■□□□□ 0.18
RXRB-201ENST00000374680 MGLLQ99685 303 aa16.17■□□□□ 0.18
RXRB-201ENST00000374680 TREX2Q9BQ50 279 aaPredicted RBP16.17■□□□□ 0.18
RXRB-201ENST00000374680 GPR34Q9UPC5 381 aa16.17■□□□□ 0.18
RXRB-201ENST00000374680 MAPRE3Q9UPY8 281 aa16.17■□□□□ 0.18
RXRB-201ENST00000374680 SLC27A6Q9Y2P4 619 aa16.17■□□□□ 0.18
RXRB-201ENST00000374680 SNRNP200O75643 2136 aaKnown RBP16.17■□□□□ 0.18
RXRB-201ENST00000374680 CTDSP2O14595 271 aa16.17■□□□□ 0.18
RXRB-201ENST00000374680 DSCR3O14972 297 aa16.17■□□□□ 0.18
RXRB-201ENST00000374680 RGS5O15539 181 aa16.17■□□□□ 0.18
RXRB-201ENST00000374680 NDUFS4O43181 175 aa16.17■□□□□ 0.18
RXRB-201ENST00000374680 ERI3O43414 337 aaKnown RBP16.17■□□□□ 0.18
RXRB-201ENST00000374680 VEGFDO43915 354 aa16.17■□□□□ 0.18
RXRB-201ENST00000374680 MFN2O95140 757 aa16.17■□□□□ 0.18
RXRB-201ENST00000374680 DRD3P35462 400 aa16.17■□□□□ 0.18
RXRB-201ENST00000374680 RGS6P49758 472 aa16.17■□□□□ 0.18
RXRB-201ENST00000374680 OXA1LQ15070 435 aa16.17■□□□□ 0.18
RXRB-201ENST00000374680 MLF2Q15773 248 aaPredicted RBP16.17■□□□□ 0.18
RXRB-201ENST00000374680 PIP5KL1Q5T9C9 394 aa16.17■□□□□ 0.18
RXRB-201ENST00000374680 ZNF793Q6ZN11 406 aa16.17■□□□□ 0.18
RXRB-201ENST00000374680 DEPDC4Q8N2C3 294 aa16.17■□□□□ 0.18
RXRB-201ENST00000374680 KXD1Q9BQD3 176 aa16.17■□□□□ 0.18
RXRB-201ENST00000374680 RPP25Q9BUL9 199 aaKnown RBP16.17■□□□□ 0.18
RXRB-201ENST00000374680 CHCHD3Q9NX63 227 aaKnown RBP16.17■□□□□ 0.18
RXRB-201ENST00000374680 CA5BQ9Y2D0 317 aa16.17■□□□□ 0.18
RXRB-201ENST00000374680 KCNE3Q9Y6H6 103 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms