RNA–Protein interactions for RNA: ENST00000373602.9

CCDC28B-201, Transcript of coiled-coil domain containing 28B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28B, Length 1,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-201ENST00000373602 HRKO00198 91 aa20.09■□□□□ 0.81
CCDC28B-201ENST00000373602 PRRG2O14669 202 aa20.09■□□□□ 0.81
CCDC28B-201ENST00000373602 HNRNPRO43390 633 aaKnown RBP20.09■□□□□ 0.81
CCDC28B-201ENST00000373602 AIFM1O95831 613 aa20.09■□□□□ 0.81
CCDC28B-201ENST00000373602 AGAP20933 346 aa20.09■□□□□ 0.81
CCDC28B-201ENST00000373602 SPRED3Q2MJR0 410 aa20.09■□□□□ 0.81
CCDC28B-201ENST00000373602 PIGGQ5H8A4 983 aa20.09■□□□□ 0.81
CCDC28B-201ENST00000373602 TTC19Q6DKK2 380 aaPredicted RBP20.09■□□□□ 0.81
CCDC28B-201ENST00000373602 ADGRD1Q6QNK2 874 aa20.09■□□□□ 0.81
CCDC28B-201ENST00000373602 OPN5Q6U736 354 aa20.09■□□□□ 0.81
CCDC28B-201ENST00000373602 MILR1Q7Z6M3 343 aa20.09■□□□□ 0.81
CCDC28B-201ENST00000373602 DOLPP1Q86YN1 238 aa20.09■□□□□ 0.81
CCDC28B-201ENST00000373602 C9orf40Q8IXQ3 194 aa20.09■□□□□ 0.81
CCDC28B-201ENST00000373602 GOLM1Q8NBJ4 401 aa20.09■□□□□ 0.81
CCDC28B-201ENST00000373602 OR2M7Q8NG81 312 aa20.09■□□□□ 0.81
CCDC28B-201ENST00000373602 OR4F6Q8NGB9 312 aa20.09■□□□□ 0.81
CCDC28B-201ENST00000373602 ZNF483Q8TF39 744 aaPredicted RBP20.09■□□□□ 0.81
CCDC28B-201ENST00000373602 PHF12Q96QT6 1004 aa20.09■□□□□ 0.81
CCDC28B-201ENST00000373602 WDR41Q9HAD4 459 aa20.09■□□□□ 0.81
CCDC28B-201ENST00000373602 PLSCR2Q9NRY7 297 aa20.09■□□□□ 0.81
CCDC28B-201ENST00000373602 NCOA6Q14686 2063 aaPredicted RBP20.09■□□□□ 0.81
CCDC28B-201ENST00000373602 A0A1B0GTH9 108 aa20.08■□□□□ 0.81
CCDC28B-201ENST00000373602 GLOD5A6NK44 160 aa20.08■□□□□ 0.81
CCDC28B-201ENST00000373602 A8MT66 165 aa20.08■□□□□ 0.81
CCDC28B-201ENST00000373602 GBAP04062 536 aa20.08■□□□□ 0.81
CCDC28B-201ENST00000373602 GRNP28799 593 aaKnown RBP20.08■□□□□ 0.81
CCDC28B-201ENST00000373602 GALNSP34059 522 aa20.08■□□□□ 0.81
CCDC28B-201ENST00000373602 SMSP52788 366 aa20.08■□□□□ 0.81
CCDC28B-201ENST00000373602 ASPHQ12797 758 aa20.08■□□□□ 0.81
CCDC28B-201ENST00000373602 IFT88Q13099 833 aa20.08■□□□□ 0.81
CCDC28B-201ENST00000373602 RPS27LQ71UM5 84 aaKnown RBP20.08■□□□□ 0.81
CCDC28B-201ENST00000373602 OR52N2Q8NGI0 321 aa20.08■□□□□ 0.81
CCDC28B-201ENST00000373602 AGAP11Q8TF27 550 aa20.08■□□□□ 0.81
CCDC28B-201ENST00000373602 UCN3Q969E3 161 aa20.08■□□□□ 0.81
CCDC28B-201ENST00000373602 MTBPQ96DY7 904 aa20.08■□□□□ 0.81
CCDC28B-201ENST00000373602 CNPPD1Q9BV87 410 aa20.08■□□□□ 0.81
CCDC28B-201ENST00000373602 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.08■□□□□ 0.81
CCDC28B-201ENST00000373602 AHSPQ9NZD4 102 aa20.08■□□□□ 0.81
CCDC28B-201ENST00000373602 ADAM29Q9UKF5 820 aa20.08■□□□□ 0.81
CCDC28B-201ENST00000373602 PCNX1Q96RV3 2341 aa20.07■□□□□ 0.8
CCDC28B-201ENST00000373602 A0A0G2JMM0 328 aa20.07■□□□□ 0.8
CCDC28B-201ENST00000373602 A0A1B0GTL3 188 aa20.07■□□□□ 0.8
CCDC28B-201ENST00000373602 A0A1W2PPB8 328 aa20.07■□□□□ 0.8
CCDC28B-201ENST00000373602 A0A1W2PRS3 328 aa20.07■□□□□ 0.8
CCDC28B-201ENST00000373602 ARHGAP10A1A4S6 786 aa20.07■□□□□ 0.8
CCDC28B-201ENST00000373602 KIR3DP1A8MWS1 328 aa20.07■□□□□ 0.8
CCDC28B-201ENST00000373602 E9PLN8 166 aa20.07■□□□□ 0.8
CCDC28B-201ENST00000373602 PPP6CO00743 305 aa20.07■□□□□ 0.8
CCDC28B-201ENST00000373602 RIPK2O43353 540 aa20.07■□□□□ 0.8
CCDC28B-201ENST00000373602 OR10H2O60403 315 aa20.07■□□□□ 0.8
CCDC28B-201ENST00000373602 OTCP00480 354 aa20.07■□□□□ 0.8
CCDC28B-201ENST00000373602 CNR1P21554 472 aa20.07■□□□□ 0.8
CCDC28B-201ENST00000373602 PTGS2P35354 604 aa20.07■□□□□ 0.8
CCDC28B-201ENST00000373602 CDH13P55290 713 aa20.07■□□□□ 0.8
CCDC28B-201ENST00000373602 HERVK_113P63132 956 aa20.07■□□□□ 0.8
CCDC28B-201ENST00000373602 ERVK-8P63133 956 aa20.07■□□□□ 0.8
CCDC28B-201ENST00000373602 ZNF267Q14586 743 aaPredicted RBP20.07■□□□□ 0.8
CCDC28B-201ENST00000373602 ZNF630Q2M218 657 aaPredicted RBP20.07■□□□□ 0.8
CCDC28B-201ENST00000373602 OR52E8Q6IFG1 317 aa20.07■□□□□ 0.8
CCDC28B-201ENST00000373602 MYRIPQ8NFW9 859 aa20.07■□□□□ 0.8
CCDC28B-201ENST00000373602 FAM57AQ8TBR7 257 aa20.07■□□□□ 0.8
CCDC28B-201ENST00000373602 DOK4Q8TEW6 326 aa20.07■□□□□ 0.8
CCDC28B-201ENST00000373602 PHF10Q8WUB8 498 aaKnown RBP20.07■□□□□ 0.8
CCDC28B-201ENST00000373602 RIT1Q92963 219 aa20.07■□□□□ 0.8
CCDC28B-201ENST00000373602 MARVELD3Q96A59 401 aa20.07■□□□□ 0.8
CCDC28B-201ENST00000373602 VKORC1Q9BQB6 163 aa20.07■□□□□ 0.8
CCDC28B-201ENST00000373602 ERVK-6Q9BXR3 956 aa20.07■□□□□ 0.8
CCDC28B-201ENST00000373602 ELOVL6Q9H5J4 265 aa20.07■□□□□ 0.8
CCDC28B-201ENST00000373602 ERVK-19Q9WJR5 959 aa20.07■□□□□ 0.8
CCDC28B-201ENST00000373602 ADAM10O14672 748 aa20.06■□□□□ 0.8
CCDC28B-201ENST00000373602 PGRMC2O15173 223 aa20.06■□□□□ 0.8
CCDC28B-201ENST00000373602 CDC40O60508 579 aaKnown RBP eCLIP20.06■□□□□ 0.8
CCDC28B-201ENST00000373602 NADKO95544 446 aaPredicted RBP20.06■□□□□ 0.8
CCDC28B-201ENST00000373602 SLC35E2P0CK97 266 aa20.06■□□□□ 0.8
CCDC28B-201ENST00000373602 HTR1EP28566 365 aa20.06■□□□□ 0.8
CCDC28B-201ENST00000373602 PPIAP62937 165 aaKnown RBP20.06■□□□□ 0.8
CCDC28B-201ENST00000373602 PLGLB1Q02325 96 aa20.06■□□□□ 0.8
CCDC28B-201ENST00000373602 SGO1Q5FBB7 561 aa20.06■□□□□ 0.8
CCDC28B-201ENST00000373602 LETMD1Q6P1Q0 360 aa20.06■□□□□ 0.8
CCDC28B-201ENST00000373602 LYPD8Q6UX82 237 aa20.06■□□□□ 0.8
CCDC28B-201ENST00000373602 RGS9BPQ6ZS82 235 aa20.06■□□□□ 0.8
CCDC28B-201ENST00000373602 TICAM1Q8IUC6 712 aa20.06■□□□□ 0.8
CCDC28B-201ENST00000373602 EID3Q8N140 333 aa20.06■□□□□ 0.8
CCDC28B-201ENST00000373602 METTL4Q8N3J2 472 aa20.06■□□□□ 0.8
CCDC28B-201ENST00000373602 SLC15A4Q8N697 577 aa20.06■□□□□ 0.8
CCDC28B-201ENST00000373602 SLC22A8Q8TCC7 542 aa20.06■□□□□ 0.8
CCDC28B-201ENST00000373602 DMRTA2Q96SC8 542 aa20.06■□□□□ 0.8
CCDC28B-201ENST00000373602 FAM173AQ9BQD7 235 aa20.06■□□□□ 0.8
CCDC28B-201ENST00000373602 MRPL1Q9BYD6 325 aaKnown RBP20.06■□□□□ 0.8
CCDC28B-201ENST00000373602 TTTY12Q9BZ98 90 aa20.06■□□□□ 0.8
CCDC28B-201ENST00000373602 TXLNGYQ9BZA5 131 aa20.06■□□□□ 0.8
CCDC28B-201ENST00000373602 ZDHHC11Q9H8X9 412 aa20.06■□□□□ 0.8
CCDC28B-201ENST00000373602 SACM1LQ9NTJ5 587 aa20.06■□□□□ 0.8
CCDC28B-201ENST00000373602 TEX10Q9NXF1 929 aaPredicted RBP20.06■□□□□ 0.8
CCDC28B-201ENST00000373602 TMEM216Q9P0N5 145 aa20.06■□□□□ 0.8
CCDC28B-201ENST00000373602 IQANK1A0A1B0GTG1 560 aa20.05■□□□□ 0.8
CCDC28B-201ENST00000373602 G3V3Y1 287 aa20.05■□□□□ 0.8
CCDC28B-201ENST00000373602 ACOT7O00154 380 aa20.05■□□□□ 0.8
CCDC28B-201ENST00000373602 GLSO94925 669 aaPredicted RBP20.05■□□□□ 0.8
CCDC28B-201ENST00000373602 KLK1P06870 262 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms