RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 ELOAQ14241 798 aaKnown RBP13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 MFSD13AQ14CX5 517 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 HMGN3Q15651 99 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 C22orf39Q6P5X5 142 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 CFAP77Q6ZQR2 320 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 HFE2Q6ZVN8 426 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 ZNF367Q7RTV3 350 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 TGM5O43548 720 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 ZNF16P17020 682 aaPredicted RBP13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 BDKRB2P30411 391 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 ABRAXAS2Q15018 415 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 MED27Q6P2C8 311 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 DNASE1L2Q92874 299 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 ALKBH4Q9NXW9 302 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 NUDT4Q9NZJ9 180 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 FETUBQ9UGM5 382 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 GLI3P10071 1580 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 DCDC2BA2VCK2 349 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 PMM2O15305 246 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 SC5DO75845 299 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 CTSAP10619 480 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 FUT4P22083 530 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 MAPK14Q16539 360 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 FAM58AQ8N1B3 248 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 JAGN1Q8N5M9 183 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 DNAJB8Q8NHS0 232 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 KIAA1143Q96AT1 154 aaPredicted RBP13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 SGTBQ96EQ0 304 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 MFSD3Q96ES6 412 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 TMEM80Q96HE8 168 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 IFT22Q9H7X7 185 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 PIGVQ9NUD9 493 aa13.51□□□□□ -0.25
RAPGEF1-202ENST00000372190 PPP1R2P9O14990 202 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 KCNJ13O60928 360 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 C8GP07360 202 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 JUPP14923 745 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 GRK6P43250 576 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 HADHBP55084 474 aaKnown RBP13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 CSNK2A1P68400 391 aaPredicted RBP13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 LRP8Q14114 963 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 CADM2Q8N3J6 435 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 FBXO15Q8NCQ5 510 aaPredicted RBP13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 CSNK2A3Q8NEV1 391 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 XAGE5Q8WWM1 108 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 NUSAP1Q9BXS6 441 aaKnown RBP13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 CRTAC1Q9NQ79 661 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 MIOSQ9NXC5 875 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 A0A087WZY1 265 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 A8MU76 341 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 FCER2P06734 321 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 ALPIP09923 528 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 PTGER3P43115 390 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 CHIT1Q13231 466 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 DPYSL2Q16555 572 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 NTRK2Q16620 822 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 RHOUQ7L0Q8 258 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 ZNF584Q8IVC4 421 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 SIDT2Q8NBJ9 832 aaKnown RBP13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 DCAKDQ8WVC6 231 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 SLC5A11Q8WWX8 675 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 HAS2Q92819 552 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 BTBD2Q9BX70 525 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 C2orf92A0A1B0GVN3 265 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 NPIPA2E9PIF3 369 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 NPIPA5E9PKD4 350 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 NPIPA3F8WFD2 350 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 STK16O75716 305 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 PTBP3O95758 552 aaKnown RBP13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 RAB6AP20340 208 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 PRPF38BQ5VTL8 546 aaKnown RBP13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 C3P1Q6ZMU1 363 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 LRRTM4Q86VH4 590 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 CHPT1Q8WUD6 406 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 SLC22A18Q96BI1 424 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 ELMOD3Q96FG2 381 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 PSKH2Q96QS6 385 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 RBCK1Q9BYM8 510 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 NPIPA1Q9UND3 350 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 ADAM12O43184 909 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 NPHS1O60500 1241 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 MT-CO2P00403 227 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 SERPINA7P05543 415 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 ACVRL1P37023 503 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 NAPRTQ6XQN6 538 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 TRIM46Q7Z4K8 759 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 TCTE3Q8IZS6 198 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 TSSK3Q96PN8 268 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 PELOQ9BRX2 385 aaKnown RBP13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 TIMM22Q9Y584 194 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 BACE2Q9Y5Z0 518 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 CCDC88AQ3V6T2 1871 aa13.5□□□□□ -0.25
RAPGEF1-202ENST00000372190 DNAJC25-GNG10A0A024R161 153 aa13.49□□□□□ -0.25
RAPGEF1-202ENST00000372190 TNFRSF10AO00220 468 aa13.49□□□□□ -0.25
RAPGEF1-202ENST00000372190 CDC7O00311 574 aa13.49□□□□□ -0.25
RAPGEF1-202ENST00000372190 PIP5K1CO60331 668 aa13.49□□□□□ -0.25
RAPGEF1-202ENST00000372190 HLA-FP30511 346 aa13.49□□□□□ -0.25
RAPGEF1-202ENST00000372190 DUSP3P51452 185 aaPredicted RBP13.49□□□□□ -0.25
RAPGEF1-202ENST00000372190 CLCQ05315 142 aa13.49□□□□□ -0.25
RAPGEF1-202ENST00000372190 DBPQ10586 325 aaPredicted RBP13.49□□□□□ -0.25
RAPGEF1-202ENST00000372190 SCARB2Q14108 478 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms