RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 SPIN2AQ99865 258 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 SPIN2BQ9BPZ2 258 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 FN3KRPQ9HA64 309 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 SERTAD4Q9NUC0 356 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 LSM5Q9Y4Y9 91 aaKnown RBP14.68□□□□□ -0.06
COL5A1-201ENST00000371817 NOX1Q9Y5S8 564 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 G6PDP11413 515 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 PPP3CBP16298 524 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 CSNK2A2P19784 350 aaPredicted RBP14.68□□□□□ -0.06
COL5A1-201ENST00000371817 IDSP22304 550 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 SOX9P48436 509 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 RNF130Q86XS8 419 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 SLC30A7Q8NEW0 376 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 THAP4Q8WY91 577 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 SMPDL3BQ92485 455 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 MICU1Q9BPX6 476 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 EFCAB11Q9BUY7 163 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 PRRC2BQ5JSZ5 2229 aaKnown RBP14.68□□□□□ -0.06
COL5A1-201ENST00000371817 COQ9O75208 318 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 ADH1CP00326 375 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 UGT2B7P16662 529 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 M6PRP20645 277 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 SSTR2P30874 369 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 DOHHQ9BU89 302 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 SLC7A11Q9UPY5 501 aa14.68□□□□□ -0.06
COL5A1-201ENST00000371817 GAAP10253 952 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 MLLT10P55197 1068 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 EMX2Q04743 252 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 ARRDC4Q8NCT1 418 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 OR11A1Q9GZK7 315 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 TEX264Q9Y6I9 313 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 FAAHO00519 579 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 TGFB1P01137 390 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 FCGRTP55899 365 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 PPA1Q15181 289 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 SLC36A3Q495N2 470 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 AGAP7PQ5VUJ5 663 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 NPAS3Q8IXF0 933 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 ZNF34Q8IZ26 560 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 HAS1Q92839 578 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 PIP5K1AQ99755 562 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 DFFBO76075 338 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 ADAP00813 363 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 TNFSF9P41273 254 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 RAP2BP61225 183 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 MAP4K2Q12851 820 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 DNAJC22Q8N4W6 341 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 OR5B17Q8NGF7 314 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 ZNF75AQ96N20 296 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 MRI1Q9BV20 369 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 POLHQ9Y253 713 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 CNTNAP4Q9C0A0 1308 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 BRINP1O60477 761 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 S100A8P05109 93 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 ADRB3P13945 408 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 PBX2P40425 430 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 NDST2P52849 883 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 GDPGP1Q6ZNW5 385 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 SGPP2Q8IWX5 399 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 FBXO15Q8NCQ5 510 aaPredicted RBP14.67□□□□□ -0.06
COL5A1-201ENST00000371817 LCN9Q8WX39 176 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 BSCL2Q96G97 398 aaPredicted RBP14.67□□□□□ -0.06
COL5A1-201ENST00000371817 TMPRSS11EQ9UL52 423 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 NPHP4O75161 1426 aaPredicted RBP14.67□□□□□ -0.06
COL5A1-201ENST00000371817 A0A0D9SG52 128 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 RNF13O43567 381 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 PDSS1Q5T2R2 415 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 RFPL4BQ6ZWI9 263 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 HCAR2Q8TDS4 363 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 TMEM14AQ9Y6G1 99 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 ENPP3O14638 875 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 PCCBP05166 539 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 NAT1P18440 290 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 IL13RA1P78552 427 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 BEX3Q00994 111 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 FLI1Q01543 452 aaPredicted RBP14.67□□□□□ -0.06
COL5A1-201ENST00000371817 KIAA1324Q6UXG2 1013 aaKnown RBP14.67□□□□□ -0.06
COL5A1-201ENST00000371817 PLPP5Q8NEB5 264 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 ACSL6Q9UKU0 697 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 CCL22O00626 93 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 DLX5P56178 289 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 ZNF648Q5T619 568 aaPredicted RBP14.67□□□□□ -0.06
COL5A1-201ENST00000371817 ACBD7Q8N6N7 88 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 FCRL3Q96P31 734 aaPredicted RBP14.67□□□□□ -0.06
COL5A1-201ENST00000371817 UHRF1Q96T88 793 aaPredicted RBP14.67□□□□□ -0.06
COL5A1-201ENST00000371817 SPATC1LQ9H0A9 340 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 MOB1AQ9H8S9 216 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 GCM1Q9NP62 436 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 ACAD8Q9UKU7 415 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 IQSEC2Q5JU85 1478 aa14.67□□□□□ -0.06
COL5A1-201ENST00000371817 NEMP2A6NFY4 417 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 IMPA2O14732 288 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 MSI1O43347 362 aaKnown RBP14.66□□□□□ -0.06
COL5A1-201ENST00000371817 MRPS14O60783 128 aaKnown RBP14.66□□□□□ -0.06
COL5A1-201ENST00000371817 SDC3O75056 442 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 SIX3O95343 332 aaPredicted RBP14.66□□□□□ -0.06
COL5A1-201ENST00000371817 CSF1P09603 554 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 RHCEP18577 417 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 HCAR3P49019 387 aa14.66□□□□□ -0.06
COL5A1-201ENST00000371817 THAP7Q9BT49 309 aaPredicted RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms