RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 CHRM5P08912 532 aaPredicted RBP3.38□□□□□ -1.87
MCF2-202ENST00000370573 LINC00032P0C843 101 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 EBLN1P0CF75 366 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 UROSP10746 265 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 CDH1P12830 882 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 HGFP14210 728 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 CD1EP15812 388 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 NDUFS1P28331 727 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 EPHA3P29320 983 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 HSD17B2P37059 387 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 RAB28P51157 221 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 INHBCP55103 352 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 GRIK2Q13002 908 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 TSTA3Q13630 321 aaPredicted RBP3.38□□□□□ -1.87
MCF2-202ENST00000370573 E2F2Q14209 437 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 KCNAB1Q14722 419 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 KIR2DS5Q14953 304 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 ABRAXAS2Q15018 415 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 BTBD16Q32M84 506 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 LSM12Q3MHD2 195 aaKnown RBP3.38□□□□□ -1.87
MCF2-202ENST00000370573 SGO1Q5FBB7 561 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 XKR6Q5GH73 641 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.38□□□□□ -1.87
MCF2-202ENST00000370573 FCRL6Q6DN72 434 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 ADNP2Q6IQ32 1131 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 FAM180AQ6UWF9 173 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 LCTLQ6UWM7 567 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 C6orf89Q6UWU4 347 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 Q6ZSR9 355 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 TMEM26Q6ZUK4 368 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 R3HCC1LQ7Z5L2 792 aaKnown RBP3.38□□□□□ -1.87
MCF2-202ENST00000370573 GGNQ86UU5 652 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 AMIGO1Q86WK6 493 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 SNX32Q86XE0 403 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 GATAD2AQ86YP4 633 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 KBTBD2Q8IY47 623 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 RNF175Q8N4F7 328 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 CCDC197Q8NCU1 140 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 ZNF740Q8NDX6 193 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 OR2T11Q8NH01 316 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 SAP25Q8TEE9 199 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 ZFPM2Q8WW38 1151 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 WDR34Q96EX3 536 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 LOXL4Q96JB6 756 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 RTKNQ9BST9 563 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 ACAT2Q9BWD1 397 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 TBC1D10AQ9BXI6 508 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 KRTAP9-3Q9BYQ3 159 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 ARRDC1-AS1Q9H2J1 176 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 SRMSQ9H3Y6 488 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 ACTR8Q9H981 624 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 SEPSECSQ9HD40 501 aaKnown RBP3.38□□□□□ -1.87
MCF2-202ENST00000370573 CCDC177Q9NQR7 707 aaPredicted RBP3.38□□□□□ -1.87
MCF2-202ENST00000370573 DLL4Q9NR61 685 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 KRT84Q9NSB2 600 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 HEY2Q9UBP5 337 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 TAC3Q9UHF0 121 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 CCL27Q9Y4X3 112 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 CSNK1G3Q9Y6M4 447 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 SNRNP200O75643 2136 aaKnown RBP3.38□□□□□ -1.87
MCF2-202ENST00000370573 ASXL3Q9C0F0 2248 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 HEATR5BQ9P2D3 2071 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 IGKV1-8A0A0C4DH67 115 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 LY6G6EA0A0G2JKS1 128 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 ATP6AP2A0A1C7CYW4 349 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 SLCO1B7G3V0H7 640 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 MASP2O00187 686 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 CASC3O15234 703 aaKnown RBP3.38□□□□□ -1.87
MCF2-202ENST00000370573 ATP6AP2O75787 350 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 CYP7B1O75881 506 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 EPN2O95208 641 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 ENO1P06733 434 aaKnown RBP3.38□□□□□ -1.87
MCF2-202ENST00000370573 C1GALT1C1LP0DN25 315 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 PORP16435 677 aaPredicted RBP3.38□□□□□ -1.87
MCF2-202ENST00000370573 POLR2CP19387 275 aaPredicted RBP3.38□□□□□ -1.87
MCF2-202ENST00000370573 EPHA8P29322 1005 aaPredicted RBP3.38□□□□□ -1.87
MCF2-202ENST00000370573 CCR9P51686 369 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 PPP1CAP62136 330 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 VAMP2P63027 116 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 IRF8Q02556 426 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 PRDX1Q06830 199 aaKnown RBP3.38□□□□□ -1.87
MCF2-202ENST00000370573 TCF15Q12870 199 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 RAB32Q13637 225 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 TBCCQ15814 346 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 GGTA1PQ4G0N0 100 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 C19orf54Q5BKX5 351 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 XKR7Q5GH72 579 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 KIAA1614Q5VZ46 1190 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 LIPJQ5W064 366 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 TMEM198Q66K66 360 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 ATG9BQ674R7 924 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 TCEAL6Q6IPX3 200 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 SLC22A25Q6T423 547 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 LARP4Q71RC2 724 aaKnown RBP eCLIP3.38□□□□□ -1.87
MCF2-202ENST00000370573 KCTD20Q7Z5Y7 419 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 SLC9B2Q86UD5 537 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 TRIM73Q86UV7 250 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 SLC35F3Q8IY50 421 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 ABHD11Q8NFV4 315 aa3.38□□□□□ -1.87
MCF2-202ENST00000370573 OR4K1Q8NGD4 311 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms