RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 TUBGCP3Q96CW5 907 aa13.86□□□□□ -0.19
COL9A1-204ENST00000370496 C11orf24Q96F05 449 aaPredicted RBP13.86□□□□□ -0.19
COL9A1-204ENST00000370496 RBM18Q96H35 190 aaKnown RBP13.86□□□□□ -0.19
COL9A1-204ENST00000370496 PPP1R36Q96LQ0 422 aa13.86□□□□□ -0.19
COL9A1-204ENST00000370496 SMAD5Q99717 465 aaKnown RBP13.86□□□□□ -0.19
COL9A1-204ENST00000370496 SEMA4CQ9C0C4 833 aa13.86□□□□□ -0.19
COL9A1-204ENST00000370496 EPS8L2Q9H6S3 715 aa13.86□□□□□ -0.19
COL9A1-204ENST00000370496 ZNF552Q9H707 407 aaPredicted RBP13.86□□□□□ -0.19
COL9A1-204ENST00000370496 MYNNQ9NPC7 610 aa13.86□□□□□ -0.19
COL9A1-204ENST00000370496 MIEF1Q9NQG6 463 aa13.86□□□□□ -0.19
COL9A1-204ENST00000370496 INTS9Q9NV88 658 aaKnown RBP13.86□□□□□ -0.19
COL9A1-204ENST00000370496 COPS7AQ9UBW8 275 aa13.86□□□□□ -0.19
COL9A1-204ENST00000370496 VTI1BQ9UEU0 232 aa13.86□□□□□ -0.19
COL9A1-204ENST00000370496 MARCOQ9UEW3 520 aaPredicted RBP13.86□□□□□ -0.19
COL9A1-204ENST00000370496 TEKT2Q9UIF3 430 aa13.86□□□□□ -0.19
COL9A1-204ENST00000370496 TMED5Q9Y3A6 229 aa13.86□□□□□ -0.19
COL9A1-204ENST00000370496 PCDHGB7Q9Y5F8 929 aa13.86□□□□□ -0.19
COL9A1-204ENST00000370496 CHD6Q8TD26 2715 aa13.86□□□□□ -0.19
COL9A1-204ENST00000370496 TRBV11-1A0A0K0K1C0 115 aa13.85□□□□□ -0.19
COL9A1-204ENST00000370496 K7EM74 188 aa13.85□□□□□ -0.19
COL9A1-204ENST00000370496 PGRMC2O15173 223 aa13.85□□□□□ -0.19
COL9A1-204ENST00000370496 PEX11AO75192 247 aa13.85□□□□□ -0.19
COL9A1-204ENST00000370496 SNNO75324 88 aaPredicted RBP13.85□□□□□ -0.19
COL9A1-204ENST00000370496 ERAL1O75616 437 aaKnown RBP13.85□□□□□ -0.19
COL9A1-204ENST00000370496 JUNP05412 331 aaKnown RBP13.85□□□□□ -0.19
COL9A1-204ENST00000370496 DRD2P14416 443 aa13.85□□□□□ -0.19
COL9A1-204ENST00000370496 MAPK1P28482 360 aa13.85□□□□□ -0.19
COL9A1-204ENST00000370496 NFATC3Q12968 1075 aa13.85□□□□□ -0.19
COL9A1-204ENST00000370496 SOWAHCQ53LP3 525 aaPredicted RBP13.85□□□□□ -0.19
COL9A1-204ENST00000370496 LINC00696Q6ZRV3 163 aa13.85□□□□□ -0.19
COL9A1-204ENST00000370496 IKBIPQ70UQ0 350 aa13.85□□□□□ -0.19
COL9A1-204ENST00000370496 KIF2BQ8N4N8 673 aa13.85□□□□□ -0.19
COL9A1-204ENST00000370496 SLC5A8Q8N695 610 aa13.85□□□□□ -0.19
COL9A1-204ENST00000370496 AMER2Q8N7J2 671 aa13.85□□□□□ -0.19
COL9A1-204ENST00000370496 FNDC5Q8NAU1 212 aa13.85□□□□□ -0.19
COL9A1-204ENST00000370496 UCN3Q969E3 161 aa13.85□□□□□ -0.19
COL9A1-204ENST00000370496 NCLNQ969V3 563 aa13.85□□□□□ -0.19
COL9A1-204ENST00000370496 VMP1Q96GC9 406 aa13.85□□□□□ -0.19
COL9A1-204ENST00000370496 OR8D2Q9GZM6 311 aa13.85□□□□□ -0.19
COL9A1-204ENST00000370496 GIMAP4Q9NUV9 329 aa13.85□□□□□ -0.19
COL9A1-204ENST00000370496 GIMAP2Q9UG22 337 aa13.85□□□□□ -0.19
COL9A1-204ENST00000370496 HAO1Q9UJM8 370 aa13.85□□□□□ -0.19
COL9A1-204ENST00000370496 UTS2RQ9UKP6 389 aa13.85□□□□□ -0.19
COL9A1-204ENST00000370496 PSME2Q9UL46 239 aa13.85□□□□□ -0.19
COL9A1-204ENST00000370496 ENTPD4Q9Y227 616 aa13.85□□□□□ -0.19
COL9A1-204ENST00000370496 ZNF780BQ9Y6R6 833 aa13.85□□□□□ -0.19
COL9A1-204ENST00000370496 ATRXP46100 2492 aa13.85□□□□□ -0.19
COL9A1-204ENST00000370496 WASHC1A8K0Z3 465 aa13.84□□□□□ -0.19
COL9A1-204ENST00000370496 A8MUI8 341 aa13.84□□□□□ -0.19
COL9A1-204ENST00000370496 KLF11O14901 512 aa13.84□□□□□ -0.19
COL9A1-204ENST00000370496 DPM1O60762 260 aa13.84□□□□□ -0.19
COL9A1-204ENST00000370496 CLCN2P51788 898 aa13.84□□□□□ -0.19
COL9A1-204ENST00000370496 C2orf80Q0P641 193 aa13.84□□□□□ -0.19
COL9A1-204ENST00000370496 ABHD17BQ5VST6 288 aa13.84□□□□□ -0.19
COL9A1-204ENST00000370496 ISLR2Q6UXK2 745 aa13.84□□□□□ -0.19
COL9A1-204ENST00000370496 HPS6Q86YV9 775 aa13.84□□□□□ -0.19
COL9A1-204ENST00000370496 MORN4Q8NDC4 146 aa13.84□□□□□ -0.19
COL9A1-204ENST00000370496 NFAM1Q8NET5 270 aaPredicted RBP13.84□□□□□ -0.19
COL9A1-204ENST00000370496 SLC2A12Q8TD20 617 aa13.84□□□□□ -0.19
COL9A1-204ENST00000370496 PTPMT1Q8WUK0 201 aaPredicted RBP13.84□□□□□ -0.19
COL9A1-204ENST00000370496 ZNF75CPQ92670 426 aaPredicted RBP13.84□□□□□ -0.19
COL9A1-204ENST00000370496 EXOSC8Q96B26 276 aaKnown RBP13.84□□□□□ -0.19
COL9A1-204ENST00000370496 PPWD1Q96BP3 646 aaKnown RBP13.84□□□□□ -0.19
COL9A1-204ENST00000370496 ART5Q96L15 291 aa13.84□□□□□ -0.19
COL9A1-204ENST00000370496 C3orf30Q96M34 536 aa13.84□□□□□ -0.19
COL9A1-204ENST00000370496 C1orf50Q9BV19 199 aa13.84□□□□□ -0.19
COL9A1-204ENST00000370496 CNPPD1Q9BV87 410 aa13.84□□□□□ -0.19
COL9A1-204ENST00000370496 NUF2Q9BZD4 464 aa13.84□□□□□ -0.19
COL9A1-204ENST00000370496 PNPOQ9NVS9 261 aa13.84□□□□□ -0.19
COL9A1-204ENST00000370496 ABI3Q9P2A4 366 aa13.84□□□□□ -0.19
COL9A1-204ENST00000370496 HEY2Q9UBP5 337 aa13.84□□□□□ -0.19
COL9A1-204ENST00000370496 BOD1L1Q8NFC6 3051 aa13.84□□□□□ -0.19
COL9A1-204ENST00000370496 PRB1P04280 392 aa13.83□□□□□ -0.19
COL9A1-204ENST00000370496 SLC35E2P0CK97 266 aa13.83□□□□□ -0.19
COL9A1-204ENST00000370496 KITP10721 976 aa13.83□□□□□ -0.19
COL9A1-204ENST00000370496 CPMP14384 443 aa13.83□□□□□ -0.19
COL9A1-204ENST00000370496 SDC1P18827 310 aa13.83□□□□□ -0.19
COL9A1-204ENST00000370496 DDCP20711 480 aa13.83□□□□□ -0.19
COL9A1-204ENST00000370496 NT5EP21589 574 aa13.83□□□□□ -0.19
COL9A1-204ENST00000370496 SOX11P35716 441 aa13.83□□□□□ -0.19
COL9A1-204ENST00000370496 XKP51811 444 aa13.83□□□□□ -0.19
COL9A1-204ENST00000370496 HK2P52789 917 aa13.83□□□□□ -0.19
COL9A1-204ENST00000370496 OCRLQ01968 901 aa13.83□□□□□ -0.19
COL9A1-204ENST00000370496 MFAP5Q13361 173 aa13.83□□□□□ -0.19
COL9A1-204ENST00000370496 KIAA0040Q15053 153 aa13.83□□□□□ -0.19
COL9A1-204ENST00000370496 RFTN2Q52LD8 501 aaPredicted RBP13.83□□□□□ -0.19
COL9A1-204ENST00000370496 B3GNTL1Q67FW5 361 aaPredicted RBP13.83□□□□□ -0.19
COL9A1-204ENST00000370496 FCRLBQ6BAA4 426 aa13.83□□□□□ -0.19
COL9A1-204ENST00000370496 PTRH1Q86Y79 214 aaKnown RBP13.83□□□□□ -0.19
COL9A1-204ENST00000370496 GALNT12Q8IXK2 581 aa13.83□□□□□ -0.19
COL9A1-204ENST00000370496 APCDD1LQ8NCL9 501 aa13.83□□□□□ -0.19
COL9A1-204ENST00000370496 CLHC1Q8NHS4 586 aa13.83□□□□□ -0.19
COL9A1-204ENST00000370496 ELP5Q8TE02 316 aa13.83□□□□□ -0.19
COL9A1-204ENST00000370496 PSMF1Q92530 271 aa13.83□□□□□ -0.19
COL9A1-204ENST00000370496 RIT1Q92963 219 aa13.83□□□□□ -0.19
COL9A1-204ENST00000370496 FCRL1Q96LA6 429 aa13.83□□□□□ -0.19
COL9A1-204ENST00000370496 TSSK3Q96PN8 268 aa13.83□□□□□ -0.19
COL9A1-204ENST00000370496 DEFB126Q9BYW3 111 aa13.83□□□□□ -0.19
COL9A1-204ENST00000370496 MED4Q9NPJ6 270 aa13.83□□□□□ -0.19
COL9A1-204ENST00000370496 EHD3Q9NZN3 535 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms