RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 GBAP04062 536 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 IL6P05231 212 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 PGRP06401 933 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 ANXA4P09525 319 aaPredicted RBP9.41□□□□□ -0.9
TPM3-210ENST00000368530 ST6GAL1P15907 406 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 POLR2CP19387 275 aaPredicted RBP9.41□□□□□ -0.9
TPM3-210ENST00000368530 CCR8P51685 355 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 MTPNP58546 118 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 PHEXP78562 749 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 MRPS22P82650 360 aaKnown RBP9.41□□□□□ -0.9
TPM3-210ENST00000368530 SLC34A1Q06495 639 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 PWP1Q13610 501 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 MAPKAPK3Q16644 382 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 HKDC1Q2TB90 917 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 TMTC4Q5T4D3 741 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 ICE2Q659A1 982 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 OR4F3Q6IEY1 312 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 ANKRD26P1Q6NSI1 321 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 DLEU7Q6UYE1 221 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 CYP2R1Q6VVX0 501 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 MED25Q71SY5 747 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 VN1R5Q7Z5H4 357 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 ANKRD46Q86W74 232 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 PLD3Q8IV08 490 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 TMEM151BQ8IW70 566 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 TMEM102Q8N9M5 508 aaPredicted RBP9.41□□□□□ -0.9
TPM3-210ENST00000368530 OR7A2PQ8NGA2 310 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 OR4E2Q8NGC2 313 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 CHTF18Q8WVB6 975 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 LCN9Q8WX39 176 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 UBE2E3Q969T4 207 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 SNRNP40Q96DI7 357 aaKnown RBP9.41□□□□□ -0.9
TPM3-210ENST00000368530 RSRC1Q96IZ7 334 aaKnown RBP9.41□□□□□ -0.9
TPM3-210ENST00000368530 FCRL1Q96LA6 429 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 AIF1LQ9BQI0 150 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 SORBS1Q9BX66 1292 aaKnown RBP9.41□□□□□ -0.9
TPM3-210ENST00000368530 RAB11FIP5Q9BXF6 653 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 PCBD2Q9H0N5 130 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 PIF1Q9H611 641 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 SPHK1Q9NYA1 384 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 SUCOQ9UBS9 1254 aaKnown RBP9.41□□□□□ -0.9
TPM3-210ENST00000368530 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.41□□□□□ -0.9
TPM3-210ENST00000368530 SNX7Q9UNH6 387 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 PCDHA9Q9Y5H5 950 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 COLEC10Q9Y6Z7 277 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 CREBBPQ92793 2442 aa9.4□□□□□ -0.9
TPM3-210ENST00000368530 GNG14A0A1W2PPG7 69 aa9.4□□□□□ -0.91
TPM3-210ENST00000368530 ANKDD1BA6NHY2 528 aa9.4□□□□□ -0.91
TPM3-210ENST00000368530 A6NL46 340 aa9.4□□□□□ -0.91
TPM3-210ENST00000368530 ISM1B1AKI9 464 aa9.4□□□□□ -0.91
TPM3-210ENST00000368530 FOXE1O00358 373 aaPredicted RBP9.4□□□□□ -0.91
TPM3-210ENST00000368530 OR1F1O43749 312 aa9.4□□□□□ -0.91
TPM3-210ENST00000368530 PCDH7O60245 1069 aa9.4□□□□□ -0.91
TPM3-210ENST00000368530 KCNH1O95259 989 aa9.4□□□□□ -0.91
TPM3-210ENST00000368530 ANP32DO95626 131 aa9.4□□□□□ -0.91
TPM3-210ENST00000368530 SERPIND1P05546 499 aa9.4□□□□□ -0.91
TPM3-210ENST00000368530 GSNP06396 782 aa9.4□□□□□ -0.91
TPM3-210ENST00000368530 COX7A2P14406 83 aa9.4□□□□□ -0.91
TPM3-210ENST00000368530 PEBP1P30086 187 aaKnown RBP9.4□□□□□ -0.91
TPM3-210ENST00000368530 TIA1P31483 386 aaKnown RBP eCLIP9.4□□□□□ -0.91
TPM3-210ENST00000368530 PTDSS1P48651 473 aaKnown RBP9.4□□□□□ -0.91
TPM3-210ENST00000368530 PHC1P78364 1004 aa9.4□□□□□ -0.91
TPM3-210ENST00000368530 REEP5Q00765 189 aa9.4□□□□□ -0.91
TPM3-210ENST00000368530 LIPEQ05469 1076 aa9.4□□□□□ -0.91
TPM3-210ENST00000368530 ATP1A4Q13733 1029 aa9.4□□□□□ -0.91
TPM3-210ENST00000368530 SELPLGQ14242 412 aa9.4□□□□□ -0.91
TPM3-210ENST00000368530 TRIM25Q14258 630 aaKnown RBP9.4□□□□□ -0.91
TPM3-210ENST00000368530 GTDC1Q4AE62 458 aa9.4□□□□□ -0.91
TPM3-210ENST00000368530 SPIN4Q56A73 249 aa9.4□□□□□ -0.91
TPM3-210ENST00000368530 NANOGP8Q6NSW7 305 aa9.4□□□□□ -0.91
TPM3-210ENST00000368530 AAGABQ6PD74 315 aa9.4□□□□□ -0.91
TPM3-210ENST00000368530 MAMDC2Q7Z304 686 aaPredicted RBP9.4□□□□□ -0.91
TPM3-210ENST00000368530 FAM9CQ8IZT9 166 aa9.4□□□□□ -0.91
TPM3-210ENST00000368530 DPP10Q8N608 796 aa9.4□□□□□ -0.91
TPM3-210ENST00000368530 ANKRD53Q8N9V6 530 aa9.4□□□□□ -0.91
TPM3-210ENST00000368530 OR2A1Q8NGT9 310 aa9.4□□□□□ -0.91
TPM3-210ENST00000368530 PRR7Q8TB68 274 aa9.4□□□□□ -0.91
TPM3-210ENST00000368530 GTF2H4Q92759 462 aa9.4□□□□□ -0.91
TPM3-210ENST00000368530 ASB9Q96DX5 294 aa9.4□□□□□ -0.91
TPM3-210ENST00000368530 CGREF1Q99674 301 aa9.4□□□□□ -0.91
TPM3-210ENST00000368530 INPP5KQ9BT40 448 aa9.4□□□□□ -0.91
TPM3-210ENST00000368530 NANOGQ9H9S0 305 aa9.4□□□□□ -0.91
TPM3-210ENST00000368530 MRPS30Q9NP92 439 aaKnown RBP9.4□□□□□ -0.91
TPM3-210ENST00000368530 ASF1BQ9NVP2 202 aa9.4□□□□□ -0.91
TPM3-210ENST00000368530 NMRK1Q9NWW6 199 aa9.4□□□□□ -0.91
TPM3-210ENST00000368530 STX18Q9P2W9 335 aaKnown RBP9.4□□□□□ -0.91
TPM3-210ENST00000368530 STOML1Q9UBI4 398 aa9.4□□□□□ -0.91
TPM3-210ENST00000368530 ABCD2Q9UBJ2 740 aa9.4□□□□□ -0.91
TPM3-210ENST00000368530 EGFL7Q9UHF1 273 aa9.4□□□□□ -0.91
TPM3-210ENST00000368530 USP22Q9UPT9 525 aa9.4□□□□□ -0.91
TPM3-210ENST00000368530 KLHL20Q9Y2M5 609 aa9.4□□□□□ -0.91
TPM3-210ENST00000368530 SPTBP11277 2137 aa9.4□□□□□ -0.91
TPM3-210ENST00000368530 ARHGAP10A1A4S6 786 aa9.39□□□□□ -0.91
TPM3-210ENST00000368530 TMEM150CB9EJG8 249 aa9.39□□□□□ -0.91
TPM3-210ENST00000368530 HCRTR1O43613 425 aa9.39□□□□□ -0.91
TPM3-210ENST00000368530 KDM1AO60341 852 aa9.39□□□□□ -0.91
TPM3-210ENST00000368530 STAMBPO95630 424 aa9.39□□□□□ -0.91
TPM3-210ENST00000368530 KLK1P06870 262 aa9.39□□□□□ -0.91
TPM3-210ENST00000368530 ACPPP15309 386 aa9.39□□□□□ -0.91
TPM3-210ENST00000368530 CD46P15529 392 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms