RNA–Protein interactions for RNA: ENST00000368407.7

EFNA1-202, Transcript of ephrin A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNA1, Length 1,926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-202ENST00000368407 FAM172BPA6NC97 362 aa25.2■■□□□ 1.62
EFNA1-202ENST00000368407 LILRB5O75023 590 aa25.2■■□□□ 1.62
EFNA1-202ENST00000368407 AP2A2O94973 939 aa25.2■■□□□ 1.62
EFNA1-202ENST00000368407 ADORA3P0DMS8 318 aa25.2■■□□□ 1.62
EFNA1-202ENST00000368407 SLC19A1P41440 591 aa25.2■■□□□ 1.62
EFNA1-202ENST00000368407 PIK3CBP42338 1070 aa25.2■■□□□ 1.62
EFNA1-202ENST00000368407 KIAA1024LP59773 190 aa25.2■■□□□ 1.62
EFNA1-202ENST00000368407 NFATC4Q14934 902 aa25.2■■□□□ 1.62
EFNA1-202ENST00000368407 ZNF528Q3MIS6 628 aa25.2■■□□□ 1.62
EFNA1-202ENST00000368407 PMS2CLQ68D20 193 aa25.2■■□□□ 1.62
EFNA1-202ENST00000368407 TRAPPC5Q8IUR0 188 aa25.2■■□□□ 1.62
EFNA1-202ENST00000368407 C1orf216Q8TAB5 229 aa25.2■■□□□ 1.62
EFNA1-202ENST00000368407 DNASE2BQ8WZ79 361 aa25.2■■□□□ 1.62
EFNA1-202ENST00000368407 TPK1Q9H3S4 243 aa25.2■■□□□ 1.62
EFNA1-202ENST00000368407 FGF22Q9HCT0 170 aa25.2■■□□□ 1.62
EFNA1-202ENST00000368407 CNOT2Q9NZN8 540 aaKnown RBP25.2■■□□□ 1.62
EFNA1-202ENST00000368407 PCDHGA2Q9Y5H1 932 aa25.2■■□□□ 1.62
EFNA1-202ENST00000368407 DIRAS1O95057 198 aa25.2■■□□□ 1.62
EFNA1-202ENST00000368407 HOXC4P09017 264 aaPredicted RBP25.2■■□□□ 1.62
EFNA1-202ENST00000368407 HSD3B1P14060 373 aa25.2■■□□□ 1.62
EFNA1-202ENST00000368407 JUPP14923 745 aa25.2■■□□□ 1.62
EFNA1-202ENST00000368407 ITPKAP23677 461 aa25.2■■□□□ 1.62
EFNA1-202ENST00000368407 HSD3B2P26439 372 aa25.2■■□□□ 1.62
EFNA1-202ENST00000368407 ALDH9A1P49189 494 aa25.2■■□□□ 1.62
EFNA1-202ENST00000368407 RGS6P49758 472 aa25.2■■□□□ 1.62
EFNA1-202ENST00000368407 PLK5Q496M5 336 aa25.2■■□□□ 1.62
EFNA1-202ENST00000368407 ZNF544Q6NX49 715 aa25.2■■□□□ 1.62
EFNA1-202ENST00000368407 CCBE1Q6UXH8 406 aaPredicted RBP25.2■■□□□ 1.62
EFNA1-202ENST00000368407 IL17RDQ8NFM7 739 aa25.2■■□□□ 1.62
EFNA1-202ENST00000368407 MTFMTQ96DP5 389 aaKnown RBP25.2■■□□□ 1.62
EFNA1-202ENST00000368407 SNX18Q96RF0 628 aa25.2■■□□□ 1.62
EFNA1-202ENST00000368407 CDCA4Q9BXL8 241 aa25.2■■□□□ 1.62
EFNA1-202ENST00000368407 RACGAP1Q9H0H5 632 aa25.2■■□□□ 1.62
EFNA1-202ENST00000368407 C3orf14Q9HBI5 128 aa25.2■■□□□ 1.62
EFNA1-202ENST00000368407 CRNNQ9UBG3 495 aaPredicted RBP25.2■■□□□ 1.62
EFNA1-202ENST00000368407 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP25.2■■□□□ 1.62
EFNA1-202ENST00000368407 RUVBL1Q9Y265 456 aaKnown RBP25.2■■□□□ 1.62
EFNA1-202ENST00000368407 SLC17A4Q9Y2C5 497 aa25.2■■□□□ 1.62
EFNA1-202ENST00000368407 KMT2EQ8IZD2 1858 aa25.19■■□□□ 1.62
EFNA1-202ENST00000368407 SH3D21A4FU49 640 aa25.19■■□□□ 1.62
EFNA1-202ENST00000368407 WNT1P04628 370 aa25.19■■□□□ 1.62
EFNA1-202ENST00000368407 DBTP11182 482 aaKnown RBP25.19■■□□□ 1.62
EFNA1-202ENST00000368407 RABIFP47224 123 aa25.19■■□□□ 1.62
EFNA1-202ENST00000368407 DHPSP49366 369 aaPredicted RBP25.19■■□□□ 1.62
EFNA1-202ENST00000368407 PRLHRP49683 370 aa25.19■■□□□ 1.62
EFNA1-202ENST00000368407 YPEL5P62699 121 aa25.19■■□□□ 1.62
EFNA1-202ENST00000368407 C10orf62Q5T681 223 aaPredicted RBP25.19■■□□□ 1.62
EFNA1-202ENST00000368407 LIPJQ5W064 366 aa25.19■■□□□ 1.62
EFNA1-202ENST00000368407 ENPP7Q6UWV6 458 aa25.19■■□□□ 1.62
EFNA1-202ENST00000368407 SYT12Q8IV01 421 aa25.19■■□□□ 1.62
EFNA1-202ENST00000368407 ZBTB44Q8NCP5 570 aa25.19■■□□□ 1.62
EFNA1-202ENST00000368407 OR4C15Q8NGM1 316 aa25.19■■□□□ 1.62
EFNA1-202ENST00000368407 UBE2FQ969M7 185 aa25.19■■□□□ 1.62
EFNA1-202ENST00000368407 APOLD1Q96LR9 279 aa25.19■■□□□ 1.62
EFNA1-202ENST00000368407 NEK6Q9HC98 313 aa25.19■■□□□ 1.62
EFNA1-202ENST00000368407 CUL9Q8IWT3 2517 aa25.19■■□□□ 1.62
EFNA1-202ENST00000368407 THEGLP0DJG4 465 aa25.18■■□□□ 1.62
EFNA1-202ENST00000368407 AOAHP28039 575 aa25.18■■□□□ 1.62
EFNA1-202ENST00000368407 AP1S2P56377 157 aa25.18■■□□□ 1.62
EFNA1-202ENST00000368407 SF3B4Q15427 424 aaKnown RBP eCLIP25.18■■□□□ 1.622e-8■■■■□ 21.9
EFNA1-202ENST00000368407 SPANXN2Q5MJ10 180 aa25.18■■□□□ 1.62
EFNA1-202ENST00000368407 THOC7Q6I9Y2 204 aaKnown RBP25.18■■□□□ 1.62
EFNA1-202ENST00000368407 ZNF605Q86T29 641 aa25.18■■□□□ 1.62
EFNA1-202ENST00000368407 FAM83FQ8NEG4 500 aaPredicted RBP25.18■■□□□ 1.62
EFNA1-202ENST00000368407 TPT1P8Q9HAU6 139 aa25.18■■□□□ 1.62
EFNA1-202ENST00000368407 CCDC177Q9NQR7 707 aaPredicted RBP25.18■■□□□ 1.62
EFNA1-202ENST00000368407 DNAJC11Q9NVH1 559 aa25.18■■□□□ 1.62
EFNA1-202ENST00000368407 MOSPD1Q9UJG1 213 aa25.18■■□□□ 1.62
EFNA1-202ENST00000368407 MYO15AQ9UKN7 3530 aa25.18■■□□□ 1.62
EFNA1-202ENST00000368407 PIKFYVEQ9Y2I7 2098 aa25.18■■□□□ 1.62
EFNA1-202ENST00000368407 A0A1W2PR77 199 aa25.18■■□□□ 1.62
EFNA1-202ENST00000368407 MPZL2O60487 215 aa25.18■■□□□ 1.62
EFNA1-202ENST00000368407 C21orf33P30042 268 aaPredicted RBP25.18■■□□□ 1.62
EFNA1-202ENST00000368407 CCR7P32248 378 aa25.18■■□□□ 1.62
EFNA1-202ENST00000368407 ASMTP46597 345 aa25.18■■□□□ 1.62
EFNA1-202ENST00000368407 RACK1P63244 317 aaKnown RBP25.18■■□□□ 1.62
EFNA1-202ENST00000368407 BCL7AQ4VC05 210 aa25.18■■□□□ 1.62
EFNA1-202ENST00000368407 ZNF621Q6ZSS3 439 aa25.18■■□□□ 1.62
EFNA1-202ENST00000368407 GDPD3Q7L5L3 318 aa25.18■■□□□ 1.62
EFNA1-202ENST00000368407 TMCO6Q96DC7 493 aa25.18■■□□□ 1.62
EFNA1-202ENST00000368407 THSD1Q9NS62 852 aa25.18■■□□□ 1.62
EFNA1-202ENST00000368407 GPR27Q9NS67 375 aa25.18■■□□□ 1.62
EFNA1-202ENST00000368407 TM7SF3Q9NS93 570 aa25.18■■□□□ 1.62
EFNA1-202ENST00000368407 FAM8A1Q9UBU6 413 aa25.18■■□□□ 1.62
EFNA1-202ENST00000368407 THADAQ6YHU6 1953 aa25.17■■□□□ 1.62
EFNA1-202ENST00000368407 C1orf226A1L170 272 aa25.17■■□□□ 1.62
EFNA1-202ENST00000368407 EFCAB10A6NFE3 127 aa25.17■■□□□ 1.62
EFNA1-202ENST00000368407 CENPBD1B2RD01 187 aa25.17■■□□□ 1.62
EFNA1-202ENST00000368407 SCAMP1O15126 338 aa25.17■■□□□ 1.62
EFNA1-202ENST00000368407 KMOO15229 486 aa25.17■■□□□ 1.62
EFNA1-202ENST00000368407 B3GALT4O96024 378 aa25.17■■□□□ 1.62
EFNA1-202ENST00000368407 TRAPPC2P0DI81 140 aa25.17■■□□□ 1.62
EFNA1-202ENST00000368407 TRAPPC2BP0DI82 140 aa25.17■■□□□ 1.62
EFNA1-202ENST00000368407 SPNP16150 400 aa25.17■■□□□ 1.62
EFNA1-202ENST00000368407 CD38P28907 300 aa25.17■■□□□ 1.62
EFNA1-202ENST00000368407 PBLDP30039 288 aaPredicted RBP25.17■■□□□ 1.62
EFNA1-202ENST00000368407 RRM2P31350 389 aa25.17■■□□□ 1.62
EFNA1-202ENST00000368407 SEPHS1P49903 392 aa25.17■■□□□ 1.62
EFNA1-202ENST00000368407 WDR45BQ5MNZ6 344 aa25.17■■□□□ 1.62
EFNA1-202ENST00000368407 ANXA8L1Q5VT79 327 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms