RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 TIMM22Q9Y584 194 aa9.18□□□□□ -0.94
CD48-202ENST00000368046 TENM4Q6N022 2769 aa9.18□□□□□ -0.94
CD48-202ENST00000368046 TRBV11-1A0A0K0K1C0 115 aa9.17□□□□□ -0.94
CD48-202ENST00000368046 C1orf226A1L170 272 aa9.17□□□□□ -0.94
CD48-202ENST00000368046 GLOD5A6NK44 160 aa9.17□□□□□ -0.94
CD48-202ENST00000368046 FCHO1O14526 889 aa9.17□□□□□ -0.94
CD48-202ENST00000368046 PGRMC2O15173 223 aa9.17□□□□□ -0.94
CD48-202ENST00000368046 TRIM13O60858 407 aa9.17□□□□□ -0.94
CD48-202ENST00000368046 RASAL1O95294 804 aa9.17□□□□□ -0.94
CD48-202ENST00000368046 DDAH2O95865 285 aa9.17□□□□□ -0.94
CD48-202ENST00000368046 NR2F6P10588 404 aa9.17□□□□□ -0.94
CD48-202ENST00000368046 ALOX15P16050 662 aaPredicted RBP9.17□□□□□ -0.94
CD48-202ENST00000368046 GNLYP22749 145 aa9.17□□□□□ -0.94
CD48-202ENST00000368046 HLCSP50747 726 aa9.17□□□□□ -0.94
CD48-202ENST00000368046 MAPK12P53778 367 aa9.17□□□□□ -0.94
CD48-202ENST00000368046 GALNT1Q10472 559 aaPredicted RBP9.17□□□□□ -0.94
CD48-202ENST00000368046 ASPHQ12797 758 aa9.17□□□□□ -0.94
CD48-202ENST00000368046 INAQ16352 499 aa9.17□□□□□ -0.94
CD48-202ENST00000368046 ZNF766Q5HY98 468 aa9.17□□□□□ -0.94
CD48-202ENST00000368046 TCHHL1Q5QJ38 904 aaPredicted RBP9.17□□□□□ -0.94
CD48-202ENST00000368046 NDUFAF5Q5TEU4 345 aa9.17□□□□□ -0.94
CD48-202ENST00000368046 SLC25A25Q6KCM7 469 aa9.17□□□□□ -0.94
CD48-202ENST00000368046 FAM180AQ6UWF9 173 aa9.17□□□□□ -0.94
CD48-202ENST00000368046 COMMD6Q7Z4G1 85 aa9.17□□□□□ -0.94
CD48-202ENST00000368046 C10orf107Q8IVU9 208 aa9.17□□□□□ -0.94
CD48-202ENST00000368046 SRRM1Q8IYB3 904 aaKnown RBP9.17□□□□□ -0.94
CD48-202ENST00000368046 TMEM156Q8N614 296 aa9.17□□□□□ -0.94
CD48-202ENST00000368046 C1orf52Q8N6N3 182 aaKnown RBP9.17□□□□□ -0.94
CD48-202ENST00000368046 OR4K14Q8NGD5 310 aa9.17□□□□□ -0.94
CD48-202ENST00000368046 OR5L2Q8NGL0 311 aa9.17□□□□□ -0.94
CD48-202ENST00000368046 SLC2A12Q8TD20 617 aa9.17□□□□□ -0.94
CD48-202ENST00000368046 GRHL3Q8TE85 626 aa9.17□□□□□ -0.94
CD48-202ENST00000368046 THAP3Q8WTV1 239 aaPredicted RBP9.17□□□□□ -0.94
CD48-202ENST00000368046 UCN3Q969E3 161 aa9.17□□□□□ -0.94
CD48-202ENST00000368046 APOPT1Q96IL0 206 aa9.17□□□□□ -0.94
CD48-202ENST00000368046 SIGLEC12Q96PQ1 595 aa9.17□□□□□ -0.94
CD48-202ENST00000368046 HBEGFQ99075 208 aa9.17□□□□□ -0.94
CD48-202ENST00000368046 PELOQ9BRX2 385 aaKnown RBP9.17□□□□□ -0.94
CD48-202ENST00000368046 TRMOQ9BU70 441 aa9.17□□□□□ -0.94
CD48-202ENST00000368046 GATA5Q9BWX5 397 aaPredicted RBP9.17□□□□□ -0.94
CD48-202ENST00000368046 OR8D2Q9GZM6 311 aa9.17□□□□□ -0.94
CD48-202ENST00000368046 TEX10Q9NXF1 929 aaPredicted RBP9.17□□□□□ -0.94
CD48-202ENST00000368046 ANKRD10Q9NXR5 420 aa9.17□□□□□ -0.94
CD48-202ENST00000368046 SENP1Q9P0U3 644 aa9.17□□□□□ -0.94
CD48-202ENST00000368046 PSME2Q9UL46 239 aa9.17□□□□□ -0.94
CD48-202ENST00000368046 UBR5O95071 2799 aaPredicted RBP9.17□□□□□ -0.94
CD48-202ENST00000368046 TMEM200CA6NKL6 621 aa9.16□□□□□ -0.94
CD48-202ENST00000368046 CTIFO43310 598 aaKnown RBP9.16□□□□□ -0.94
CD48-202ENST00000368046 SPAG7O75391 227 aa9.16□□□□□ -0.94
CD48-202ENST00000368046 PRKRAO75569 313 aaKnown RBP9.16□□□□□ -0.94
CD48-202ENST00000368046 ITGA10O75578 1167 aa9.16□□□□□ -0.94
CD48-202ENST00000368046 NEURL1O76050 574 aa9.16□□□□□ -0.94
CD48-202ENST00000368046 AIFM1O95831 613 aa9.16□□□□□ -0.94
CD48-202ENST00000368046 CRYABP02511 175 aaKnown RBP9.16□□□□□ -0.94
CD48-202ENST00000368046 SP1P08047 785 aa9.16□□□□□ -0.94
CD48-202ENST00000368046 FGF4P08620 206 aa9.16□□□□□ -0.94
CD48-202ENST00000368046 UROSP10746 265 aa9.16□□□□□ -0.94
CD48-202ENST00000368046 CHN1P15882 459 aa9.16□□□□□ -0.94
CD48-202ENST00000368046 PIK3R1P27986 724 aa9.16□□□□□ -0.94
CD48-202ENST00000368046 SERPINB3P29508 390 aa9.16□□□□□ -0.94
CD48-202ENST00000368046 ALDH3A1P30838 453 aa9.16□□□□□ -0.94
CD48-202ENST00000368046 ST13P50502 369 aaKnown RBP9.16□□□□□ -0.94
CD48-202ENST00000368046 XKP51811 444 aa9.16□□□□□ -0.94
CD48-202ENST00000368046 FOXA1P55317 472 aa9.16□□□□□ -0.94
CD48-202ENST00000368046 RNF4P78317 190 aa9.16□□□□□ -0.94
CD48-202ENST00000368046 PLIN5Q00G26 463 aa9.16□□□□□ -0.94
CD48-202ENST00000368046 PCLAFQ15004 111 aa9.16□□□□□ -0.94
CD48-202ENST00000368046 OR1C1Q15619 314 aa9.16□□□□□ -0.94
CD48-202ENST00000368046 EIF2S3LQ2VIR3 472 aaKnown RBP9.16□□□□□ -0.94
CD48-202ENST00000368046 KRT71Q3SY84 523 aa9.16□□□□□ -0.94
CD48-202ENST00000368046 ZNF468Q5VIY5 522 aaPredicted RBP9.16□□□□□ -0.94
CD48-202ENST00000368046 ZNF324BQ6AW86 544 aaPredicted RBP9.16□□□□□ -0.94
CD48-202ENST00000368046 OR52E8Q6IFG1 317 aa9.16□□□□□ -0.94
CD48-202ENST00000368046 DGAT2L6Q6ZPD8 337 aa9.16□□□□□ -0.94
CD48-202ENST00000368046 TRIM46Q7Z4K8 759 aa9.16□□□□□ -0.94
CD48-202ENST00000368046 CROCCP2Q86T23 111 aa9.16□□□□□ -0.94
CD48-202ENST00000368046 BCORP1Q8N888 145 aa9.16□□□□□ -0.94
CD48-202ENST00000368046 ZNF321PQ8N8H1 164 aa9.16□□□□□ -0.94
CD48-202ENST00000368046 TMEM178AQ8NBL3 297 aa9.16□□□□□ -0.94
CD48-202ENST00000368046 MDS2Q8NDY4 140 aa9.16□□□□□ -0.94
CD48-202ENST00000368046 TCP10LQ8TDR4 215 aa9.16□□□□□ -0.94
CD48-202ENST00000368046 ZNF721Q8TF20 911 aa9.16□□□□□ -0.94
CD48-202ENST00000368046 RIT1Q92963 219 aa9.16□□□□□ -0.94
CD48-202ENST00000368046 SCMH1Q96GD3 660 aa9.16□□□□□ -0.94
CD48-202ENST00000368046 ART5Q96L15 291 aa9.16□□□□□ -0.94
CD48-202ENST00000368046 FAM111AQ96PZ2 611 aa9.16□□□□□ -0.94
CD48-202ENST00000368046 TAAR6Q96RI8 345 aa9.16□□□□□ -0.94
CD48-202ENST00000368046 KCNA7Q96RP8 456 aa9.16□□□□□ -0.94
CD48-202ENST00000368046 ACPTQ9BZG2 426 aa9.16□□□□□ -0.94
CD48-202ENST00000368046 SIRT5Q9NXA8 310 aa9.16□□□□□ -0.94
CD48-202ENST00000368046 MYOTQ9UBF9 498 aa9.16□□□□□ -0.94
CD48-202ENST00000368046 COPS7AQ9UBW8 275 aa9.16□□□□□ -0.94
CD48-202ENST00000368046 MCM8Q9UJA3 840 aa9.16□□□□□ -0.94
CD48-202ENST00000368046 CES1P1Q9UKY3 287 aa9.16□□□□□ -0.94
CD48-202ENST00000368046 PCDHA9Q9Y5H5 950 aa9.16□□□□□ -0.94
CD48-202ENST00000368046 NUP210LQ5VU65 1888 aa9.16□□□□□ -0.94
CD48-202ENST00000368046 BAHCC1Q9P281 2608 aa9.15□□□□□ -0.94
CD48-202ENST00000368046 ANKUB1A6NFN9 424 aa9.15□□□□□ -0.94
CD48-202ENST00000368046 RGS16O15492 202 aaPredicted RBP9.15□□□□□ -0.94
CD48-202ENST00000368046 TYROBPO43914 113 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms