RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 BTN3A2P78410 334 aa11.41□□□□□ -0.58
USF1-203ENST00000368021 GTDC1Q4AE62 458 aa11.41□□□□□ -0.58
USF1-203ENST00000368021 LCN8Q6JVE9 175 aa11.41□□□□□ -0.58
USF1-203ENST00000368021 ZFP1Q6P2D0 407 aa11.41□□□□□ -0.58
USF1-203ENST00000368021 WDR74Q6RFH5 385 aaPredicted RBP11.41□□□□□ -0.58
USF1-203ENST00000368021 ZNF621Q6ZSS3 439 aa11.41□□□□□ -0.58
USF1-203ENST00000368021 FAM92BQ6ZTR7 304 aa11.41□□□□□ -0.58
USF1-203ENST00000368021 TRIML2Q8N7C3 387 aa11.41□□□□□ -0.58
USF1-203ENST00000368021 GOLM1Q8NBJ4 401 aa11.41□□□□□ -0.58
USF1-203ENST00000368021 TNIP2Q8NFZ5 429 aa11.41□□□□□ -0.58
USF1-203ENST00000368021 SLC26A7Q8TE54 656 aa11.41□□□□□ -0.58
USF1-203ENST00000368021 BORCS5Q969J3 196 aa11.41□□□□□ -0.58
USF1-203ENST00000368021 NACC2Q96BF6 587 aa11.41□□□□□ -0.58
USF1-203ENST00000368021 ZNF583Q96ND8 569 aa11.41□□□□□ -0.58
USF1-203ENST00000368021 ZNF285Q96NJ3 590 aa11.41□□□□□ -0.58
USF1-203ENST00000368021 TGM7Q96PF1 710 aa11.41□□□□□ -0.58
USF1-203ENST00000368021 TRIM15Q9C019 465 aa11.41□□□□□ -0.58
USF1-203ENST00000368021 INIPQ9NRY2 104 aa11.41□□□□□ -0.58
USF1-203ENST00000368021 SEMA5BQ9P283 1151 aa11.41□□□□□ -0.58
USF1-203ENST00000368021 VPS4AQ9UN37 437 aa11.41□□□□□ -0.58
USF1-203ENST00000368021 CORO2BQ9UQ03 480 aa11.41□□□□□ -0.58
USF1-203ENST00000368021 PCDHB3Q9Y5E6 796 aa11.41□□□□□ -0.58
USF1-203ENST00000368021 SNX13Q9Y5W8 968 aa11.41□□□□□ -0.58
USF1-203ENST00000368021 AK5Q9Y6K8 562 aa11.41□□□□□ -0.58
USF1-203ENST00000368021 MN1Q10571 1320 aaPredicted RBP11.41□□□□□ -0.58
USF1-203ENST00000368021 A0A1W2PRB8 838 aa11.4□□□□□ -0.58
USF1-203ENST00000368021 AQP12BA6NM10 295 aa11.4□□□□□ -0.58
USF1-203ENST00000368021 EVPLLA8MZ36 301 aa11.4□□□□□ -0.58
USF1-203ENST00000368021 CLIC1O00299 241 aa11.4□□□□□ -0.58
USF1-203ENST00000368021 PDPK1O15530 556 aa11.4□□□□□ -0.58
USF1-203ENST00000368021 PROM1O43490 865 aa11.4□□□□□ -0.58
USF1-203ENST00000368021 B4GAT1O43505 415 aa11.4□□□□□ -0.58
USF1-203ENST00000368021 CNOT3O75175 753 aaKnown RBP11.4□□□□□ -0.58
USF1-203ENST00000368021 TRMUO75648 421 aaKnown RBP11.4□□□□□ -0.58
USF1-203ENST00000368021 TNFAIP8O95379 198 aa11.4□□□□□ -0.58
USF1-203ENST00000368021 ZBTB11O95625 1053 aaPredicted RBP11.4□□□□□ -0.58
USF1-203ENST00000368021 CPSF4O95639 269 aaKnown RBP11.4□□□□□ -0.58
USF1-203ENST00000368021 CLPTM1O96005 669 aa11.4□□□□□ -0.58
USF1-203ENST00000368021 GSNP06396 782 aa11.4□□□□□ -0.58
USF1-203ENST00000368021 C8BP07358 591 aa11.4□□□□□ -0.58
USF1-203ENST00000368021 UBTFL6P0CB48 400 aaPredicted RBP11.4□□□□□ -0.58
USF1-203ENST00000368021 GPX2P18283 190 aa11.4□□□□□ -0.58
USF1-203ENST00000368021 ALDH9A1P49189 494 aa11.4□□□□□ -0.58
USF1-203ENST00000368021 NR1H2P55055 460 aa11.4□□□□□ -0.58
USF1-203ENST00000368021 PCBP4P57723 403 aaKnown RBP11.4□□□□□ -0.58
USF1-203ENST00000368021 VSX2P58304 361 aaPredicted RBP11.4□□□□□ -0.58
USF1-203ENST00000368021 HBA1P69905 142 aa11.4□□□□□ -0.58
USF1-203ENST00000368021 ABHD18Q0P651 414 aa11.4□□□□□ -0.58
USF1-203ENST00000368021 SQSTM1Q13501 440 aa11.4□□□□□ -0.58
USF1-203ENST00000368021 MLC1Q15049 377 aa11.4□□□□□ -0.58
USF1-203ENST00000368021 NR0B2Q15466 257 aa11.4□□□□□ -0.58
USF1-203ENST00000368021 NKAIN2Q5VXU1 208 aa11.4□□□□□ -0.58
USF1-203ENST00000368021 GPR155Q7Z3F1 870 aa11.4□□□□□ -0.58
USF1-203ENST00000368021 MCATQ8IVS2 390 aaKnown RBP11.4□□□□□ -0.58
USF1-203ENST00000368021 AQP12AQ8IXF9 295 aa11.4□□□□□ -0.58
USF1-203ENST00000368021 MMP21Q8N119 569 aa11.4□□□□□ -0.58
USF1-203ENST00000368021 ARHGEF39Q8N4T4 335 aa11.4□□□□□ -0.58
USF1-203ENST00000368021 ANKK1Q8NFD2 765 aa11.4□□□□□ -0.58
USF1-203ENST00000368021 OR2T12Q8NG77 320 aa11.4□□□□□ -0.58
USF1-203ENST00000368021 OR4A15Q8NGL6 344 aa11.4□□□□□ -0.58
USF1-203ENST00000368021 OR10A6Q8NH74 314 aa11.4□□□□□ -0.58
USF1-203ENST00000368021 CIDECQ96AQ7 238 aaPredicted RBP11.4□□□□□ -0.58
USF1-203ENST00000368021 ZBED6CLQ96FA7 236 aaPredicted RBP11.4□□□□□ -0.58
USF1-203ENST00000368021 AURKBQ96GD4 344 aaPredicted RBP11.4□□□□□ -0.58
USF1-203ENST00000368021 CNDP2Q96KP4 475 aaKnown RBP11.4□□□□□ -0.58
USF1-203ENST00000368021 S100A14Q9HCY8 104 aa11.4□□□□□ -0.58
USF1-203ENST00000368021 NEUROD4Q9HD90 331 aa11.4□□□□□ -0.58
USF1-203ENST00000368021 PDE7BQ9NP56 450 aa11.4□□□□□ -0.58
USF1-203ENST00000368021 ENAMQ9NRM1 1142 aa11.4□□□□□ -0.58
USF1-203ENST00000368021 ACSS1Q9NUB1 689 aaPredicted RBP11.4□□□□□ -0.58
USF1-203ENST00000368021 MS4A12Q9NXJ0 267 aa11.4□□□□□ -0.58
USF1-203ENST00000368021 TAS2R9Q9NYW1 312 aa11.4□□□□□ -0.58
USF1-203ENST00000368021 FTSJ1Q9UET6 329 aa11.4□□□□□ -0.58
USF1-203ENST00000368021 PHF11Q9UIL8 331 aa11.4□□□□□ -0.58
USF1-203ENST00000368021 MAGEL2Q9UJ55 1249 aa11.4□□□□□ -0.58
USF1-203ENST00000368021 ATG4BQ9Y4P1 393 aa11.4□□□□□ -0.58
USF1-203ENST00000368021 IGHV5-51A0A0C4DH38 117 aa11.39□□□□□ -0.59
USF1-203ENST00000368021 A0A1W2PR48 441 aa11.39□□□□□ -0.59
USF1-203ENST00000368021 TCRBV3S1A0A5B6 114 aa11.39□□□□□ -0.59
USF1-203ENST00000368021 B3GALT2O43825 422 aa11.39□□□□□ -0.59
USF1-203ENST00000368021 C6orf47O95873 294 aa11.39□□□□□ -0.59
USF1-203ENST00000368021 CD1CP29017 333 aa11.39□□□□□ -0.59
USF1-203ENST00000368021 MLLT3P42568 568 aaPredicted RBP11.39□□□□□ -0.59
USF1-203ENST00000368021 GABRA4P48169 554 aa11.39□□□□□ -0.59
USF1-203ENST00000368021 PPM1FP49593 454 aaPredicted RBP11.39□□□□□ -0.59
USF1-203ENST00000368021 RHDQ02161 417 aa11.39□□□□□ -0.59
USF1-203ENST00000368021 CAMK2BQ13554 666 aa11.39□□□□□ -0.59
USF1-203ENST00000368021 PRSS53Q2L4Q9 553 aa11.39□□□□□ -0.59
USF1-203ENST00000368021 PRTGQ2VWP7 1150 aa11.39□□□□□ -0.59
USF1-203ENST00000368021 INAVAQ3KP66 663 aa11.39□□□□□ -0.59
USF1-203ENST00000368021 DEFB134Q4QY38 66 aa11.39□□□□□ -0.59
USF1-203ENST00000368021 IZUMO2Q6UXV1 221 aa11.39□□□□□ -0.59
USF1-203ENST00000368021 SPRED1Q7Z699 444 aa11.39□□□□□ -0.59
USF1-203ENST00000368021 SERPINA11Q86U17 422 aa11.39□□□□□ -0.59
USF1-203ENST00000368021 IFNEQ86WN2 208 aa11.39□□□□□ -0.59
USF1-203ENST00000368021 CALHM3Q86XJ0 350 aa11.39□□□□□ -0.59
USF1-203ENST00000368021 PROSER1Q86XN7 944 aa11.39□□□□□ -0.59
USF1-203ENST00000368021 HIPK4Q8NE63 616 aa11.39□□□□□ -0.59
USF1-203ENST00000368021 ZCCHC10Q8TBK6 192 aa11.39□□□□□ -0.59
USF1-203ENST00000368021 OR5P2Q8WZ92 322 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms