RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 WASF2Q9Y6W5 498 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 U3KQV3 271 aa8.3□□□□□ -1.08
SYNE1-206ENST00000367253 SULT1C4O75897 302 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 EPHA3P29320 983 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 HOXC13P31276 330 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 PPP3R1P63098 170 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 RAB33AQ14088 237 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 EXOC3L2Q2M3D2 409 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 CDKAL1Q5VV42 579 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 APTXQ7Z2E3 356 aaKnown RBP8.29□□□□□ -1.08
SYNE1-206ENST00000367253 PTGR2Q8N8N7 351 aaPredicted RBP8.29□□□□□ -1.08
SYNE1-206ENST00000367253 PNLDC1Q8NA58 520 aaKnown RBP8.29□□□□□ -1.08
SYNE1-206ENST00000367253 NDNFQ8TB73 568 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 C16orf78Q8WTQ4 265 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 ZCCHC14Q8WYQ9 949 aaKnown RBP8.29□□□□□ -1.08
SYNE1-206ENST00000367253 EMID1Q96A84 441 aaPredicted RBP8.29□□□□□ -1.08
SYNE1-206ENST00000367253 CENPNQ96H22 339 aaPredicted RBP8.29□□□□□ -1.08
SYNE1-206ENST00000367253 SFXN2Q96NB2 322 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 PANX1Q96RD7 426 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 AARSD1Q9BTE6 412 aaKnown RBP8.29□□□□□ -1.08
SYNE1-206ENST00000367253 NPLQ9BXD5 320 aaPredicted RBP8.29□□□□□ -1.08
SYNE1-206ENST00000367253 NMUR1Q9HB89 426 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 GPRC5BQ9NZH0 403 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 PDP1Q9P0J1 537 aaPredicted RBP8.29□□□□□ -1.08
SYNE1-206ENST00000367253 A0A1W2PP55 124 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 BTNL10A8MVZ5 291 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 E5RJQ4 531 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 CDC123O75794 336 aaPredicted RBP8.29□□□□□ -1.08
SYNE1-206ENST00000367253 LATS1O95835 1130 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 SLC6A2P23975 617 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 HTR2AP28223 471 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 GBX2P52951 348 aaPredicted RBP8.29□□□□□ -1.08
SYNE1-206ENST00000367253 GBE1Q04446 702 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 VWA5B1Q5TIE3 1220 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 NOXRED1Q6NXP6 359 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 GPR137CQ8N3F9 429 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 OR6Q1Q8NGQ2 317 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 MTERF1Q99551 399 aaKnown RBP8.29□□□□□ -1.08
SYNE1-206ENST00000367253 PITHD1Q9GZP4 211 aaPredicted RBP8.29□□□□□ -1.08
SYNE1-206ENST00000367253 ATG10Q9H0Y0 220 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 DENND2DQ9H6A0 471 aaPredicted RBP8.29□□□□□ -1.08
SYNE1-206ENST00000367253 MIOSQ9NXC5 875 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 CDH22Q9UJ99 828 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 IKZF2Q9UKS7 526 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 SARDHQ9UL12 918 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 PCDHGB2Q9Y5G2 931 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 C4BP0C0L5 1744 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 CCDC187A0A096LP49 1063 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 LOC105369274A0A096LPK9 316 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 A0A1B0GVC2 190 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 OR5K3A6NET4 321 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 KCNU1A8MYU2 1149 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 B4E171 279 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 EEF1E1-BLOC1S5C9J1V9 151 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 RFXANKO14593 260 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 EEF1E1O43324 174 aaKnown RBP8.29□□□□□ -1.08
SYNE1-206ENST00000367253 CYP11A1P05108 521 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 GPIP06744 558 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 RPL22P35268 128 aaKnown RBP8.29□□□□□ -1.08
SYNE1-206ENST00000367253 CSKP41240 450 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 SPEM2Q0P670 501 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 AIMP2Q13155 320 aaKnown RBP8.29□□□□□ -1.08
SYNE1-206ENST00000367253 GBX1Q14549 363 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 COL13A1Q5TAT6 717 aaPredicted RBP8.29□□□□□ -1.08
SYNE1-206ENST00000367253 RAET1LQ5VY80 246 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 SMARCD3Q6STE5 483 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 ZNF704Q6ZNC4 412 aaPredicted RBP8.29□□□□□ -1.08
SYNE1-206ENST00000367253 C15orf39Q6ZRI6 1047 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 LINGO2Q7L985 606 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 GALNT5Q7Z7M9 940 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 SLC41A1Q8IVJ1 513 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 OR4N4Q8N0Y3 316 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 RBM15BQ8NDT2 890 aaKnown RBP8.29□□□□□ -1.08
SYNE1-206ENST00000367253 OR4L1Q8NH43 312 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 PRR7Q8TB68 274 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 CREB3L1Q96BA8 519 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 DMRTA2Q96SC8 542 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 ALG9Q9H6U8 611 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 MKKSQ9NPJ1 570 aaPredicted RBP8.29□□□□□ -1.08
SYNE1-206ENST00000367253 PRTFDC1Q9NRG1 225 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 ACOD1A6NK06 481 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 GLCEO94923 617 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 STAG3L3P0CL85 134 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 PRKACGP22612 351 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 PTTG1IPP53801 180 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 PCBP4P57723 403 aaKnown RBP8.29□□□□□ -1.08
SYNE1-206ENST00000367253 IL10RBQ08334 325 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 DHCR24Q15392 516 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 HACD4Q5VWC8 232 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 RPL13AP3Q6NVV1 102 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 CFAP161Q6P656 301 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 OPN5Q6U736 354 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 SERINC5Q86VE9 423 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 TUSC5Q8IXB3 177 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 ABHD11Q8NFV4 315 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 SLC41A3Q96GZ6 507 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 THOC3Q96J01 351 aaKnown RBP8.29□□□□□ -1.08
SYNE1-206ENST00000367253 TMEM68Q96MH6 324 aa8.29□□□□□ -1.08
SYNE1-206ENST00000367253 CDX2Q99626 313 aaPredicted RBP8.29□□□□□ -1.08
SYNE1-206ENST00000367253 LMF2Q9BU23 707 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms