RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 CSTF1Q05048 431 aaKnown RBP7.79□□□□□ -1.16
CD46-208ENST00000367042 RBBP4Q09028 425 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 ARSIQ5FYB1 569 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 CDKL4Q5MAI5 379 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 RNF165Q6ZSG1 346 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 KRT74Q7RTS7 529 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 IFNL1Q8IU54 200 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 NPAS4Q8IUM7 802 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 OR8H1Q8NGG4 311 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 OR52P1PQ8NH57 321 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 AP2M1Q96CW1 435 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 C1GALT1Q9NS00 363 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 TMEM39AQ9NV64 488 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 ING3Q9NXR8 418 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 COQ3Q9NZJ6 369 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 TMPRSS11EQ9UL52 423 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 SCN10AQ9Y5Y9 1956 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 MYOFQ9NZM1 2061 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 A0A075B6Q4 140 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 PIPSLA2A3N6 862 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 B4DXG7 233 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 ANHXE9PGG2 379 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 H0YIV9 168 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 TNFRSF10AO00220 468 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 AKR7A2O43488 359 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 PRKYO43930 277 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 HPGDSO60760 199 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 ERAL1O75616 437 aaKnown RBP7.78□□□□□ -1.16
CD46-208ENST00000367042 ELFN1P0C7U0 828 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 CELP19835 753 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 MAP2K3P46734 347 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 AVPR1BP47901 424 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 MAPK12P53778 367 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 RAB8AP61006 207 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 SRP54P61011 504 aaKnown RBP7.78□□□□□ -1.16
CD46-208ENST00000367042 GPLD1P80108 840 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 MAP4K2Q12851 820 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 CDKN3Q16667 212 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 TRIM71Q2Q1W2 868 aaKnown RBP7.78□□□□□ -1.16
CD46-208ENST00000367042 MPPE1Q53F39 396 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 SDE2Q6IQ49 451 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 KIAA1161Q6NSJ0 714 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 MZT2BQ6NZ67 158 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 GDPD4Q6W3E5 623 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 CACUL1Q86Y37 369 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 HORMAD2Q8N7B1 307 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 TP53I13Q8NBR0 393 aaPredicted RBP7.78□□□□□ -1.16
CD46-208ENST00000367042 OR5D16Q8NGK9 328 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 OR8J1Q8NGP2 316 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 CHAC2Q8WUX2 184 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 AP3S1Q92572 193 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 ALG14Q96F25 216 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 ABCG4Q9H172 646 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 RETREG1Q9H6L5 497 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 CXorf36Q9H7Y0 433 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 ZNF334Q9HCZ1 680 aaPredicted RBP7.78□□□□□ -1.16
CD46-208ENST00000367042 FKBP14Q9NWM8 211 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 MCUBQ9NWR8 336 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 SPG21Q9NZD8 308 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 NPAP1Q9NZP6 1156 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 NDRG2Q9UN36 371 aaKnown RBP7.78□□□□□ -1.16
CD46-208ENST00000367042 SH2B3Q9UQQ2 575 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 ITM2BQ9Y287 266 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 ASF1AQ9Y294 204 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 GLOD5A6NK44 160 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 TMEM229AB2RXF0 380 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 PQBP1O60828 265 aaKnown RBP7.78□□□□□ -1.16
CD46-208ENST00000367042 OR2B3O76000 313 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 FURINP09958 794 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 HLA-FP30511 346 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 NNMTP40261 264 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 CRYBB2P43320 205 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 KIR2DL3P43628 341 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 LSM11P83369 360 aaKnown RBP eCLIP7.78□□□□□ -1.16
CD46-208ENST00000367042 RHAGQ02094 409 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 TMEM115Q12893 351 aaPredicted RBP7.78□□□□□ -1.16
CD46-208ENST00000367042 PUM1Q14671 1186 aaKnown RBP eCLIP7.78□□□□□ -1.16
CD46-208ENST00000367042 CEP78Q5JTW2 689 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 MLIPQ5VWP3 458 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 TTC23LQ6PF05 361 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 CNIH2Q6PI25 160 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 SLC38A5Q8WUX1 472 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 ZNF480Q8WV37 535 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 CHTF18Q8WVB6 975 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 DEDD2Q8WXF8 326 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 UFD1Q92890 307 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 TP53INP1Q96A56 240 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 DHRS1Q96LJ7 313 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 TEFMQ96QE5 360 aaKnown RBP7.78□□□□□ -1.16
CD46-208ENST00000367042 PRR14Q9BWN1 585 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 MRPL9Q9BYD2 267 aaKnown RBP7.78□□□□□ -1.16
CD46-208ENST00000367042 OR2AG1Q9H205 316 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 UCKL1Q9NWZ5 548 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 STMN3Q9NZ72 180 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 PCDH10Q9P2E7 1040 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 ZNF624Q9P2J8 865 aaPredicted RBP7.78□□□□□ -1.16
CD46-208ENST00000367042 FTSJ1Q9UET6 329 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 ZNF222Q9UK12 451 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 VWA8A3KMH1 1905 aa7.78□□□□□ -1.16
CD46-208ENST00000367042 C2orf92A0A1B0GVN3 265 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms