RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 AVL9Q8NBF6 648 aa10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 OR4E2Q8NGC2 313 aa10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 GTF2H4Q92759 462 aa10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 CCDC124Q96CT7 223 aaKnown RBP10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 ASB9Q96DX5 294 aa10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 OR6C1Q96RD1 312 aa10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 EBPLQ9BY08 206 aa10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 OR51B5Q9H339 312 aa10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 RMND5AQ9H871 391 aa10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 SLC6A20Q9NP91 592 aa10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 SPHK1Q9NYA1 384 aa10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 MCM8Q9UJA3 840 aa10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 SNX7Q9UNH6 387 aa10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 PCDHA9Q9Y5H5 950 aa10.62□□□□□ -0.71
CSNK1E-202ENST00000366216 PRORSD1PA6NEY8 169 aa10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 ISM1B1AKI9 464 aa10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 BTN3A3O00478 584 aa10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 ACOT8O14734 319 aa10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 OR1F1O43749 312 aa10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 DNAJA2O60884 412 aa10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 ERN1O75460 977 aaKnown RBP10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 BCAS2O75934 225 aaPredicted RBP10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 KCNH1O95259 989 aa10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 TBX6O95947 436 aaPredicted RBP10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 ANXA4P09525 319 aaPredicted RBP10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 RPL3P39023 403 aaKnown RBP10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 GSTM5P46439 218 aa10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 ARFIP1P53367 373 aa10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 EPHA4P54764 986 aa10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 PER3P56645 1201 aa10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 EEFSECP57772 596 aaKnown RBP10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 RPS18P62269 152 aaKnown RBP10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 ZNF763Q0D2J5 394 aa10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 IL10RAQ13651 578 aa10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 CCNIQ14094 377 aa10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 TRIM25Q14258 630 aaKnown RBP10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 GPR18Q14330 331 aa10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 ZIC1Q15915 447 aa10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 PLEKHN1Q494U1 663 aaPredicted RBP10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 KHDRBS2Q5VWX1 349 aaKnown RBP10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 COMMD6Q7Z4G1 85 aa10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 PLXDC1Q8IUK5 500 aa10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 CISD2Q8N5K1 135 aaKnown RBP10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 OR8J3Q8NGG0 315 aa10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 OR8J2Q8NGG1 315 aa10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 CLHC1Q8NHS4 586 aa10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 FLVCR1-AS1Q8TAF5 88 aa10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 CREB3L4Q8TEY5 395 aa10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 TMEM125Q96AQ2 219 aa10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 ITCHQ96J02 903 aa10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 EGLN2Q96KS0 407 aa10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 LURAP1Q96LR2 239 aa10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 QRFPRQ96P65 431 aa10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 OR52E6Q96RD3 313 aa10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 CGREF1Q99674 301 aa10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 CENPKQ9BS16 269 aa10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 DPH7Q9BTV6 452 aa10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 GPR87Q9BY21 358 aa10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 IL1RL2Q9HB29 575 aa10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 PRM3Q9NNZ6 103 aa10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 MYNNQ9NPC7 610 aa10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 LHX9Q9NQ69 397 aa10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 CMTM6Q9NX76 183 aa10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 STX18Q9P2W9 335 aaKnown RBP10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 ATP6V1HQ9UI12 483 aa10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 ADAM29Q9UKF5 820 aa10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 ITGB1BP2Q9UKP3 347 aa10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 AP3M1Q9Y2T2 418 aa10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 KLK4Q9Y5K2 254 aa10.61□□□□□ -0.71
CSNK1E-202ENST00000366216 A0A096LPI6 279 aa10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 FEZF1A0PJY2 475 aa10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 PRSS44E7EML9 344 aa10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 NME4O00746 187 aa10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 SCAMP2O15127 329 aaKnown RBP10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 LCMT2O60294 686 aaKnown RBP10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 KRT36O76013 467 aa10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 HPCAL1P37235 193 aa10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 KIR3DL1P43629 444 aa10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 TRPC1P48995 793 aa10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 PHC1P78364 1004 aa10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 MS4A2Q01362 244 aa10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 RELAQ04206 551 aa10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 LRRC74AQ0VAA2 488 aa10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 BNIP2Q12982 314 aa10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 FLOT2Q14254 428 aa10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 CAPRIN1Q14444 709 aaKnown RBP10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 PLCL1Q15111 1095 aa10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 TMEM35AQ53FP2 167 aa10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 LRIF1Q5T3J3 769 aa10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 NANOGP8Q6NSW7 305 aa10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 TMEM26Q6ZUK4 368 aa10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 IKBIPQ70UQ0 350 aa10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 PAGE2Q7Z2X7 111 aa10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 GDF7Q7Z4P5 450 aa10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 ADCK2Q7Z695 626 aa10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 GPR180Q86V85 440 aa10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 PAQR7Q86WK9 346 aa10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 MFSD9Q8NBP5 474 aa10.6□□□□□ -0.71
CSNK1E-202ENST00000366216 TRPV3Q8NET8 790 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms