RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 ABHD18Q0P651 414 aa19.41■□□□□ 0.7
SHISA4-201ENST00000362011 TRMT5Q32P41 509 aaKnown RBP19.41■□□□□ 0.7
SHISA4-201ENST00000362011 C3orf38Q5JPI3 329 aa19.41■□□□□ 0.7
SHISA4-201ENST00000362011 C6orf10Q5SRN2 563 aa19.41■□□□□ 0.7
SHISA4-201ENST00000362011 C16orf89Q6UX73 402 aa19.41■□□□□ 0.7
SHISA4-201ENST00000362011 DHDDSQ86SQ9 333 aa19.41■□□□□ 0.7
SHISA4-201ENST00000362011 ANKRD46Q86W74 232 aa19.41■□□□□ 0.7
SHISA4-201ENST00000362011 ZNF595Q8IYB9 648 aa19.41■□□□□ 0.7
SHISA4-201ENST00000362011 SAMD14Q8IZD0 417 aaPredicted RBP19.41■□□□□ 0.7
SHISA4-201ENST00000362011 CLECL1Q8IZS7 167 aa19.41■□□□□ 0.7
SHISA4-201ENST00000362011 SLC38A9Q8NBW4 561 aa19.41■□□□□ 0.7
SHISA4-201ENST00000362011 LSM14AQ8ND56 463 aaKnown RBP19.41■□□□□ 0.7
SHISA4-201ENST00000362011 RBM15BQ8NDT2 890 aaKnown RBP19.41■□□□□ 0.7
SHISA4-201ENST00000362011 TMEM52Q8NDY8 209 aa19.41■□□□□ 0.7
SHISA4-201ENST00000362011 OR4K14Q8NGD5 310 aa19.41■□□□□ 0.7
SHISA4-201ENST00000362011 ZFP28Q8NHY6 868 aa19.41■□□□□ 0.7
SHISA4-201ENST00000362011 FBXO27Q8NI29 283 aa19.41■□□□□ 0.7
SHISA4-201ENST00000362011 SNIP1Q8TAD8 396 aaKnown RBP19.41■□□□□ 0.7
SHISA4-201ENST00000362011 TBC1D20Q96BZ9 403 aa19.41■□□□□ 0.7
SHISA4-201ENST00000362011 ZBED6CLQ96FA7 236 aaPredicted RBP19.41■□□□□ 0.7
SHISA4-201ENST00000362011 CCDC115Q96NT0 180 aa19.41■□□□□ 0.7
SHISA4-201ENST00000362011 OR1F2PQ96R84 312 aa19.41■□□□□ 0.7
SHISA4-201ENST00000362011 BBS4Q96RK4 519 aa19.41■□□□□ 0.7
SHISA4-201ENST00000362011 RBCK1Q9BYM8 510 aa19.41■□□□□ 0.7
SHISA4-201ENST00000362011 MKKSQ9NPJ1 570 aaPredicted RBP19.41■□□□□ 0.7
SHISA4-201ENST00000362011 TRPC4Q9UBN4 977 aa19.41■□□□□ 0.7
SHISA4-201ENST00000362011 ZNF780BQ9Y6R6 833 aa19.41■□□□□ 0.7
SHISA4-201ENST00000362011 WASHC1A8K0Z3 465 aa19.4■□□□□ 0.7
SHISA4-201ENST00000362011 ATXN7O15265 892 aaPredicted RBP19.4■□□□□ 0.7
SHISA4-201ENST00000362011 CPSF4O95639 269 aaKnown RBP19.4■□□□□ 0.7
SHISA4-201ENST00000362011 NPPAP01160 153 aa19.4■□□□□ 0.7
SHISA4-201ENST00000362011 FHP07954 510 aa19.4■□□□□ 0.7
SHISA4-201ENST00000362011 ATXN8OSP0DMR3 200 aa19.4■□□□□ 0.7
SHISA4-201ENST00000362011 ZNF28P17035 718 aa19.4■□□□□ 0.7
SHISA4-201ENST00000362011 RORAP35398 523 aa19.4■□□□□ 0.7
SHISA4-201ENST00000362011 TRPC1P48995 793 aa19.4■□□□□ 0.7
SHISA4-201ENST00000362011 PCBP4P57723 403 aaKnown RBP19.4■□□□□ 0.7
SHISA4-201ENST00000362011 DCDP81605 110 aaKnown RBP19.4■□□□□ 0.7
SHISA4-201ENST00000362011 SLC25A3Q00325 362 aa19.4■□□□□ 0.7
SHISA4-201ENST00000362011 TARDBPQ13148 414 aaKnown RBP eCLIP19.4■□□□□ 0.7
SHISA4-201ENST00000362011 NKAIN1Q4KMZ8 207 aa19.4■□□□□ 0.7
SHISA4-201ENST00000362011 ZNF385CQ66K41 422 aaPredicted RBP19.4■□□□□ 0.7
SHISA4-201ENST00000362011 FAM180BQ6P0A1 224 aa19.4■□□□□ 0.7
SHISA4-201ENST00000362011 COX15Q7KZN9 410 aa19.4■□□□□ 0.7
SHISA4-201ENST00000362011 SHISA5Q8N114 240 aa19.4■□□□□ 0.7
SHISA4-201ENST00000362011 PMEPA1Q969W9 287 aa19.4■□□□□ 0.7
SHISA4-201ENST00000362011 MIEF2Q96C03 454 aa19.4■□□□□ 0.7
SHISA4-201ENST00000362011 LRFN5Q96NI6 719 aa19.4■□□□□ 0.7
SHISA4-201ENST00000362011 DCBLD2Q96PD2 775 aa19.4■□□□□ 0.7
SHISA4-201ENST00000362011 BTBD10Q9BSF8 475 aa19.4■□□□□ 0.7
SHISA4-201ENST00000362011 ASPSCR1Q9BZE9 553 aa19.4■□□□□ 0.7
SHISA4-201ENST00000362011 ULBP3Q9BZM4 244 aa19.4■□□□□ 0.7
SHISA4-201ENST00000362011 IL1RL2Q9HB29 575 aa19.4■□□□□ 0.7
SHISA4-201ENST00000362011 SERHLQ9NQF3 203 aa19.4■□□□□ 0.7
SHISA4-201ENST00000362011 PRTFDC1Q9NRG1 225 aa19.4■□□□□ 0.7
SHISA4-201ENST00000362011 ACSS1Q9NUB1 689 aaPredicted RBP19.4■□□□□ 0.7
SHISA4-201ENST00000362011 TAS2R1Q9NYW7 299 aa19.4■□□□□ 0.7
SHISA4-201ENST00000362011 CROTQ9UKG9 612 aa19.4■□□□□ 0.7
SHISA4-201ENST00000362011 PCDHGB4Q9UN71 923 aa19.4■□□□□ 0.7
SHISA4-201ENST00000362011 SATB2Q9UPW6 733 aa19.4■□□□□ 0.7
SHISA4-201ENST00000362011 B3GALT1Q9Y5Z6 326 aa19.4■□□□□ 0.7
SHISA4-201ENST00000362011 A0A096LPI6 279 aa19.39■□□□□ 0.69
SHISA4-201ENST00000362011 MYO1GB0I1T2 1018 aa19.39■□□□□ 0.69
SHISA4-201ENST00000362011 CLDN4O14493 209 aa19.39■□□□□ 0.69
SHISA4-201ENST00000362011 RFXANKO14593 260 aa19.39■□□□□ 0.69
SHISA4-201ENST00000362011 GYG2O15488 501 aa19.39■□□□□ 0.69
SHISA4-201ENST00000362011 ERN1O75460 977 aaKnown RBP19.39■□□□□ 0.69
SHISA4-201ENST00000362011 ANP32DO95626 131 aa19.39■□□□□ 0.69
SHISA4-201ENST00000362011 C6orf47O95873 294 aa19.39■□□□□ 0.69
SHISA4-201ENST00000362011 ONECUT2O95948 504 aa19.39■□□□□ 0.69
SHISA4-201ENST00000362011 CSNK2A2P19784 350 aaPredicted RBP19.39■□□□□ 0.69
SHISA4-201ENST00000362011 AGXTP21549 392 aa19.39■□□□□ 0.69
SHISA4-201ENST00000362011 CPOXP36551 454 aa19.39■□□□□ 0.69
SHISA4-201ENST00000362011 DNAL1Q4LDG9 190 aa19.39■□□□□ 0.69
SHISA4-201ENST00000362011 MED25Q71SY5 747 aa19.39■□□□□ 0.69
SHISA4-201ENST00000362011 OR4A15Q8NGL6 344 aa19.39■□□□□ 0.69
SHISA4-201ENST00000362011 OR5P2Q8WZ92 322 aa19.39■□□□□ 0.69
SHISA4-201ENST00000362011 LRRC58Q96CX6 371 aa19.39■□□□□ 0.69
SHISA4-201ENST00000362011 CNRIP1Q96F85 164 aaPredicted RBP19.39■□□□□ 0.69
SHISA4-201ENST00000362011 PANX1Q96RD7 426 aa19.39■□□□□ 0.69
SHISA4-201ENST00000362011 INPP5KQ9BT40 448 aa19.39■□□□□ 0.69
SHISA4-201ENST00000362011 PAIP1Q9H074 479 aaKnown RBP19.39■□□□□ 0.69
SHISA4-201ENST00000362011 A0A1W2PNU3 283 aaPredicted RBP19.38■□□□□ 0.69
SHISA4-201ENST00000362011 PMS2P1A4D2B8 440 aa19.38■□□□□ 0.69
SHISA4-201ENST00000362011 B4GALT2O60909 372 aa19.38■□□□□ 0.69
SHISA4-201ENST00000362011 LDB3O75112 727 aa19.38■□□□□ 0.69
SHISA4-201ENST00000362011 GPR75O95800 540 aa19.38■□□□□ 0.69
SHISA4-201ENST00000362011 KLK3P07288 261 aaPredicted RBP19.38■□□□□ 0.69
SHISA4-201ENST00000362011 C8orf89P0DMQ9 161 aa19.38■□□□□ 0.69
SHISA4-201ENST00000362011 MANFP55145 182 aaKnown RBP19.38■□□□□ 0.69
SHISA4-201ENST00000362011 FOLH1Q04609 750 aa19.38■□□□□ 0.69
SHISA4-201ENST00000362011 C19orf57Q0VDD7 668 aa19.38■□□□□ 0.69
SHISA4-201ENST00000362011 ERV3-1Q14264 604 aa19.38■□□□□ 0.69
SHISA4-201ENST00000362011 MLC1Q15049 377 aa19.38■□□□□ 0.69
SHISA4-201ENST00000362011 CEBPEQ15744 281 aa19.38■□□□□ 0.69
SHISA4-201ENST00000362011 LRIF1Q5T3J3 769 aa19.38■□□□□ 0.69
SHISA4-201ENST00000362011 TMEM164Q5U3C3 297 aa19.38■□□□□ 0.69
SHISA4-201ENST00000362011 DNAJC14Q6Y2X3 702 aaPredicted RBP19.38■□□□□ 0.69
SHISA4-201ENST00000362011 PGAM4Q8N0Y7 254 aa19.38■□□□□ 0.69
SHISA4-201ENST00000362011 SLC39A7Q92504 469 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms