RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 SLC15A4Q8N697 577 aa19.42■□□□□ 0.7
CD47-202ENST00000361309 NAXEQ8NCW5 288 aa19.42■□□□□ 0.7
CD47-202ENST00000361309 BBOF1Q8ND07 529 aa19.42■□□□□ 0.7
CD47-202ENST00000361309 FAM13CQ8NE31 585 aa19.42■□□□□ 0.7
CD47-202ENST00000361309 C7orf57Q8NEG2 295 aa19.42■□□□□ 0.7
CD47-202ENST00000361309 JSRP1Q96MG2 331 aaPredicted RBP19.42■□□□□ 0.7
CD47-202ENST00000361309 KRT12Q99456 494 aa19.42■□□□□ 0.7
CD47-202ENST00000361309 SH3GL2Q99962 352 aa19.42■□□□□ 0.7
CD47-202ENST00000361309 PHACTR1Q9C0D0 580 aa19.42■□□□□ 0.7
CD47-202ENST00000361309 DMRT3Q9NQL9 472 aa19.42■□□□□ 0.7
CD47-202ENST00000361309 DLL4Q9NR61 685 aa19.42■□□□□ 0.7
CD47-202ENST00000361309 SMYD2Q9NRG4 433 aa19.42■□□□□ 0.7
CD47-202ENST00000361309 CD274Q9NZQ7 290 aa19.42■□□□□ 0.7
CD47-202ENST00000361309 PTBP2Q9UKA9 531 aaKnown RBP19.42■□□□□ 0.7
CD47-202ENST00000361309 CBLCQ9ULV8 474 aa19.42■□□□□ 0.7
CD47-202ENST00000361309 EDARQ9UNE0 448 aa19.42■□□□□ 0.7
CD47-202ENST00000361309 KDM4EB2RXH2 506 aaPredicted RBP19.41■□□□□ 0.7
CD47-202ENST00000361309 SAP18O00422 153 aaKnown RBP19.41■□□□□ 0.7
CD47-202ENST00000361309 DYRK3O43781 588 aa19.41■□□□□ 0.7
CD47-202ENST00000361309 LRATO95237 230 aa19.41■□□□□ 0.7
CD47-202ENST00000361309 PCNAP12004 261 aa19.41■□□□□ 0.7
CD47-202ENST00000361309 CD1DP15813 335 aa19.41■□□□□ 0.7
CD47-202ENST00000361309 SSR2P43308 183 aa19.41■□□□□ 0.7
CD47-202ENST00000361309 ASCL1P50553 236 aa19.41■□□□□ 0.7
CD47-202ENST00000361309 DGKQP52824 942 aa19.41■□□□□ 0.7
CD47-202ENST00000361309 TBCCQ15814 346 aa19.41■□□□□ 0.7
CD47-202ENST00000361309 PDPRQ8NCN5 879 aa19.41■□□□□ 0.7
CD47-202ENST00000361309 TNIP2Q8NFZ5 429 aa19.41■□□□□ 0.7
CD47-202ENST00000361309 OR10G3Q8NGC4 313 aa19.41■□□□□ 0.7
CD47-202ENST00000361309 FAM222BQ8WU58 562 aa19.41■□□□□ 0.7
CD47-202ENST00000361309 RNASE6Q93091 150 aaKnown RBP19.41■□□□□ 0.7
CD47-202ENST00000361309 RBM18Q96H35 190 aaKnown RBP19.41■□□□□ 0.7
CD47-202ENST00000361309 ALPK1Q96QP1 1244 aa19.41■□□□□ 0.7
CD47-202ENST00000361309 SORBS1Q9BX66 1292 aaKnown RBP19.41■□□□□ 0.7
CD47-202ENST00000361309 QPCTLQ9NXS2 382 aa19.41■□□□□ 0.7
CD47-202ENST00000361309 CNIH4Q9P003 139 aa19.41■□□□□ 0.7
CD47-202ENST00000361309 CHCHD2Q9Y6H1 151 aaPredicted RBP19.41■□□□□ 0.7
CD47-202ENST00000361309 DVL2O14641 736 aa19.4■□□□□ 0.7
CD47-202ENST00000361309 PHGDHO43175 533 aaKnown RBP19.4■□□□□ 0.7
CD47-202ENST00000361309 FBXO45P0C2W1 286 aa19.4■□□□□ 0.7
CD47-202ENST00000361309 CASP2P42575 452 aa19.4■□□□□ 0.7
CD47-202ENST00000361309 WNT3P56703 355 aa19.4■□□□□ 0.7
CD47-202ENST00000361309 SLAMF1Q13291 335 aa19.4■□□□□ 0.7
CD47-202ENST00000361309 SYDE1Q6ZW31 735 aaPredicted RBP19.4■□□□□ 0.7
CD47-202ENST00000361309 CHSY3Q70JA7 882 aa19.4■□□□□ 0.7
CD47-202ENST00000361309 KLHL7Q8IXQ5 586 aa19.4■□□□□ 0.7
CD47-202ENST00000361309 EXT2Q93063 718 aa19.4■□□□□ 0.7
CD47-202ENST00000361309 LRRC46Q96FV0 321 aa19.4■□□□□ 0.7
CD47-202ENST00000361309 FBXL20Q96IG2 436 aa19.4■□□□□ 0.7
CD47-202ENST00000361309 ART5Q96L15 291 aa19.4■□□□□ 0.7
CD47-202ENST00000361309 OR51B5Q9H339 312 aa19.4■□□□□ 0.7
CD47-202ENST00000361309 RPF2Q9H7B2 306 aaKnown RBP19.4■□□□□ 0.7
CD47-202ENST00000361309 MED12Q93074 2177 aa19.4■□□□□ 0.7
CD47-202ENST00000361309 C15orf38-AP3S2A0A0A6YYH1 394 aa19.39■□□□□ 0.69
CD47-202ENST00000361309 AHRRA9YTQ3 701 aa19.39■□□□□ 0.69
CD47-202ENST00000361309 TP73O15350 636 aa19.39■□□□□ 0.69
CD47-202ENST00000361309 FAM155BO75949 473 aa19.39■□□□□ 0.69
CD47-202ENST00000361309 SEC31AO94979 1220 aaKnown RBP19.39■□□□□ 0.69
CD47-202ENST00000361309 EPPINO95925 133 aa19.39■□□□□ 0.69
CD47-202ENST00000361309 S100BP04271 92 aaPredicted RBP19.39■□□□□ 0.69
CD47-202ENST00000361309 SERPINB3P29508 390 aa19.39■□□□□ 0.69
CD47-202ENST00000361309 CEACAM8P31997 349 aaPredicted RBP19.39■□□□□ 0.69
CD47-202ENST00000361309 ATP6V0D1P61421 351 aa19.39■□□□□ 0.69
CD47-202ENST00000361309 HERVK_113P63132 956 aa19.39■□□□□ 0.69
CD47-202ENST00000361309 ERVK-8P63133 956 aa19.39■□□□□ 0.69
CD47-202ENST00000361309 ADAM8P78325 824 aa19.39■□□□□ 0.69
CD47-202ENST00000361309 PLIN5Q00G26 463 aa19.39■□□□□ 0.69
CD47-202ENST00000361309 DR1Q01658 176 aa19.39■□□□□ 0.69
CD47-202ENST00000361309 DUSP8Q13202 625 aa19.39■□□□□ 0.69
CD47-202ENST00000361309 BIKQ13323 160 aa19.39■□□□□ 0.69
CD47-202ENST00000361309 E2F2Q14209 437 aa19.39■□□□□ 0.69
CD47-202ENST00000361309 ACSF3Q4G176 576 aaPredicted RBP19.39■□□□□ 0.69
CD47-202ENST00000361309 C18orf63Q68DL7 685 aa19.39■□□□□ 0.69
CD47-202ENST00000361309 OR4C11Q6IEV9 310 aa19.39■□□□□ 0.69
CD47-202ENST00000361309 MED27Q6P2C8 311 aa19.39■□□□□ 0.69
CD47-202ENST00000361309 CAPN12Q6ZSI9 719 aa19.39■□□□□ 0.69
CD47-202ENST00000361309 LAS2Q8IYD9 372 aa19.39■□□□□ 0.69
CD47-202ENST00000361309 DND1Q8IYX4 353 aaKnown RBP19.39■□□□□ 0.69
CD47-202ENST00000361309 RNF175Q8N4F7 328 aa19.39■□□□□ 0.69
CD47-202ENST00000361309 TANKQ92844 425 aa19.39■□□□□ 0.69
CD47-202ENST00000361309 UBE2E3Q969T4 207 aa19.39■□□□□ 0.69
CD47-202ENST00000361309 MBD6Q96DN6 1003 aa19.39■□□□□ 0.69
CD47-202ENST00000361309 TSPAN17Q96FV3 270 aa19.39■□□□□ 0.69
CD47-202ENST00000361309 GAL3ST4Q96RP7 486 aa19.39■□□□□ 0.69
CD47-202ENST00000361309 DOHHQ9BU89 302 aa19.39■□□□□ 0.69
CD47-202ENST00000361309 ERVK-6Q9BXR3 956 aa19.39■□□□□ 0.69
CD47-202ENST00000361309 CD244Q9BZW8 370 aa19.39■□□□□ 0.69
CD47-202ENST00000361309 TRIM31Q9BZY9 425 aa19.39■□□□□ 0.69
CD47-202ENST00000361309 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.39■□□□□ 0.69
CD47-202ENST00000361309 MS4A12Q9NXJ0 267 aa19.39■□□□□ 0.69
CD47-202ENST00000361309 CNOT11Q9UKZ1 510 aaKnown RBP19.39■□□□□ 0.69
CD47-202ENST00000361309 RNF112Q9ULX5 631 aa19.39■□□□□ 0.69
CD47-202ENST00000361309 ERVK-19Q9WJR5 959 aa19.39■□□□□ 0.69
CD47-202ENST00000361309 RPH3AQ9Y2J0 694 aaPredicted RBP19.39■□□□□ 0.69
CD47-202ENST00000361309 IQANK1A0A1B0GTG1 560 aa19.38■□□□□ 0.69
CD47-202ENST00000361309 E7ESA3 106 aa19.38■□□□□ 0.69
CD47-202ENST00000361309 PRKRAO75569 313 aaKnown RBP19.38■□□□□ 0.69
CD47-202ENST00000361309 C1QAP02745 245 aa19.38■□□□□ 0.69
CD47-202ENST00000361309 FOSL1P15407 271 aa19.38■□□□□ 0.69
CD47-202ENST00000361309 ALOX15P16050 662 aaPredicted RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms