RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 ART5Q96L15 291 aa17.92■□□□□ 0.46
HLA-DRB1-201ENST00000360004 C3orf30Q96M34 536 aa17.92■□□□□ 0.46
HLA-DRB1-201ENST00000360004 MAGEB18Q96M61 343 aa17.92■□□□□ 0.46
HLA-DRB1-201ENST00000360004 TSSK3Q96PN8 268 aa17.92■□□□□ 0.46
HLA-DRB1-201ENST00000360004 WDR77Q9BQA1 342 aaPredicted RBP17.92■□□□□ 0.46
HLA-DRB1-201ENST00000360004 OR8D2Q9GZM6 311 aa17.92■□□□□ 0.46
HLA-DRB1-201ENST00000360004 MYNNQ9NPC7 610 aa17.92■□□□□ 0.46
HLA-DRB1-201ENST00000360004 ZNF71Q9NQZ8 489 aaPredicted RBP17.92■□□□□ 0.46
HLA-DRB1-201ENST00000360004 PTGFRNQ9P2B2 879 aa17.92■□□□□ 0.46
HLA-DRB1-201ENST00000360004 HAO1Q9UJM8 370 aa17.92■□□□□ 0.46
HLA-DRB1-201ENST00000360004 ZNF451Q9Y4E5 1061 aa17.92■□□□□ 0.46
HLA-DRB1-201ENST00000360004 PCDHGA9Q9Y5G4 932 aaKnown RBP17.92■□□□□ 0.46
HLA-DRB1-201ENST00000360004 ITPR1Q14643 2758 aa17.91■□□□□ 0.46
HLA-DRB1-201ENST00000360004 ZFHX4Q86UP3 3567 aa17.91■□□□□ 0.46
HLA-DRB1-201ENST00000360004 WASHC1A8K0Z3 465 aa17.91■□□□□ 0.46
HLA-DRB1-201ENST00000360004 NPIPB8E9PQR5 432 aa17.91■□□□□ 0.46
HLA-DRB1-201ENST00000360004 HDAC3O15379 428 aa17.91■□□□□ 0.46
HLA-DRB1-201ENST00000360004 AKAP10O43572 662 aa17.91■□□□□ 0.46
HLA-DRB1-201ENST00000360004 ITGAMP11215 1152 aa17.91■□□□□ 0.46
HLA-DRB1-201ENST00000360004 PORP16435 677 aaPredicted RBP17.91■□□□□ 0.46
HLA-DRB1-201ENST00000360004 DDX5P17844 614 aaKnown RBP17.91■□□□□ 0.46
HLA-DRB1-201ENST00000360004 CSNK2A2P19784 350 aaPredicted RBP17.91■□□□□ 0.46
HLA-DRB1-201ENST00000360004 FEN1P39748 380 aaKnown RBP17.91■□□□□ 0.46
HLA-DRB1-201ENST00000360004 ASMTP46597 345 aa17.91■□□□□ 0.46
HLA-DRB1-201ENST00000360004 CLCN2P51788 898 aa17.91■□□□□ 0.46
HLA-DRB1-201ENST00000360004 HK2P52789 917 aa17.91■□□□□ 0.46
HLA-DRB1-201ENST00000360004 Q0VFX4 171 aa17.91■□□□□ 0.46
HLA-DRB1-201ENST00000360004 C6orf136Q5SQH8 315 aa17.91■□□□□ 0.46
HLA-DRB1-201ENST00000360004 NXNQ6DKJ4 435 aa17.91■□□□□ 0.46
HLA-DRB1-201ENST00000360004 WDR75Q8IWA0 830 aaKnown RBP17.91■□□□□ 0.46
HLA-DRB1-201ENST00000360004 SAMD14Q8IZD0 417 aaPredicted RBP17.91■□□□□ 0.46
HLA-DRB1-201ENST00000360004 LIX1Q8N485 282 aa17.91■□□□□ 0.46
HLA-DRB1-201ENST00000360004 B3GNT7Q8NFL0 401 aa17.91■□□□□ 0.46
HLA-DRB1-201ENST00000360004 CLHC1Q8NHS4 586 aa17.91■□□□□ 0.46
HLA-DRB1-201ENST00000360004 PIWIL2Q8TC59 973 aaKnown RBP17.91■□□□□ 0.46
HLA-DRB1-201ENST00000360004 CKAP2Q8WWK9 683 aa17.91■□□□□ 0.46
HLA-DRB1-201ENST00000360004 RIT1Q92963 219 aa17.91■□□□□ 0.46
HLA-DRB1-201ENST00000360004 GFM2Q969S9 779 aaKnown RBP17.91■□□□□ 0.46
HLA-DRB1-201ENST00000360004 NCLNQ969V3 563 aa17.91■□□□□ 0.46
HLA-DRB1-201ENST00000360004 VMP1Q96GC9 406 aa17.91■□□□□ 0.46
HLA-DRB1-201ENST00000360004 BBS4Q96RK4 519 aa17.91■□□□□ 0.46
HLA-DRB1-201ENST00000360004 CNPPD1Q9BV87 410 aa17.91■□□□□ 0.46
HLA-DRB1-201ENST00000360004 NUDT9Q9BW91 350 aa17.91■□□□□ 0.46
HLA-DRB1-201ENST00000360004 DEFB126Q9BYW3 111 aa17.91■□□□□ 0.46
HLA-DRB1-201ENST00000360004 EPS8L2Q9H6S3 715 aa17.91■□□□□ 0.46
HLA-DRB1-201ENST00000360004 MMP25Q9NPA2 562 aa17.91■□□□□ 0.46
HLA-DRB1-201ENST00000360004 ABI3Q9P2A4 366 aa17.91■□□□□ 0.46
HLA-DRB1-201ENST00000360004 TP53TG5Q9Y2B4 290 aa17.91■□□□□ 0.46
HLA-DRB1-201ENST00000360004 TRBV11-1A0A0K0K1C0 115 aa17.9■□□□□ 0.46
HLA-DRB1-201ENST00000360004 LRATO95237 230 aa17.9■□□□□ 0.46
HLA-DRB1-201ENST00000360004 JUNP05412 331 aaKnown RBP17.9■□□□□ 0.46
HLA-DRB1-201ENST00000360004 SLC35E2P0CK97 266 aa17.9■□□□□ 0.46
HLA-DRB1-201ENST00000360004 PRPS2P11908 318 aa17.9■□□□□ 0.46
HLA-DRB1-201ENST00000360004 CPMP14384 443 aa17.9■□□□□ 0.46
HLA-DRB1-201ENST00000360004 SDC1P18827 310 aa17.9■□□□□ 0.46
HLA-DRB1-201ENST00000360004 DDCP20711 480 aa17.9■□□□□ 0.46
HLA-DRB1-201ENST00000360004 NTSP30990 170 aa17.9■□□□□ 0.46
HLA-DRB1-201ENST00000360004 HPCAL1P37235 193 aa17.9■□□□□ 0.46
HLA-DRB1-201ENST00000360004 SOX8P57073 446 aa17.9■□□□□ 0.46
HLA-DRB1-201ENST00000360004 IGLV3-21P80748 117 aaPredicted RBP17.9■□□□□ 0.46
HLA-DRB1-201ENST00000360004 KIAA0040Q15053 153 aa17.9■□□□□ 0.46
HLA-DRB1-201ENST00000360004 CRB2Q5IJ48 1285 aa17.9■□□□□ 0.46
HLA-DRB1-201ENST00000360004 ABHD17BQ5VST6 288 aa17.9■□□□□ 0.46
HLA-DRB1-201ENST00000360004 IL23RQ5VWK5 629 aa17.9■□□□□ 0.46
HLA-DRB1-201ENST00000360004 LINC00696Q6ZRV3 163 aa17.9■□□□□ 0.46
HLA-DRB1-201ENST00000360004 FAM47EQ6ZV65 393 aa17.9■□□□□ 0.46
HLA-DRB1-201ENST00000360004 ASB18Q6ZVZ8 466 aa17.9■□□□□ 0.46
HLA-DRB1-201ENST00000360004 TICAM1Q8IUC6 712 aa17.9■□□□□ 0.46
HLA-DRB1-201ENST00000360004 SLC5A8Q8N695 610 aa17.9■□□□□ 0.46
HLA-DRB1-201ENST00000360004 EXD3Q8N9H8 876 aa17.9■□□□□ 0.46
HLA-DRB1-201ENST00000360004 MORN4Q8NDC4 146 aa17.9■□□□□ 0.46
HLA-DRB1-201ENST00000360004 C11orf24Q96F05 449 aaPredicted RBP17.9■□□□□ 0.46
HLA-DRB1-201ENST00000360004 C7orf26Q96N11 449 aa17.9■□□□□ 0.46
HLA-DRB1-201ENST00000360004 AKTIPQ9H8T0 292 aa17.9■□□□□ 0.46
HLA-DRB1-201ENST00000360004 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.9■□□□□ 0.46
HLA-DRB1-201ENST00000360004 NOP53Q9NZM5 478 aaKnown RBP17.9■□□□□ 0.46
HLA-DRB1-201ENST00000360004 HEY2Q9UBP5 337 aa17.9■□□□□ 0.46
HLA-DRB1-201ENST00000360004 CFAP47Q6ZTR5 3102 aa17.9■□□□□ 0.46
HLA-DRB1-201ENST00000360004 LAMA5O15230 3695 aa17.89■□□□□ 0.45
HLA-DRB1-201ENST00000360004 PCSK5Q92824 1860 aa17.89■□□□□ 0.45
HLA-DRB1-201ENST00000360004 CEACAM4O75871 244 aa17.89■□□□□ 0.45
HLA-DRB1-201ENST00000360004 BCKDHAP12694 445 aa17.89■□□□□ 0.45
HLA-DRB1-201ENST00000360004 LBPP18428 481 aa17.89■□□□□ 0.45
HLA-DRB1-201ENST00000360004 ZNF267Q14586 743 aaPredicted RBP17.89■□□□□ 0.45
HLA-DRB1-201ENST00000360004 FAM71E1Q6IPT2 247 aa17.89■□□□□ 0.45
HLA-DRB1-201ENST00000360004 TCTN3Q6NUS6 607 aa17.89■□□□□ 0.45
HLA-DRB1-201ENST00000360004 ISLR2Q6UXK2 745 aa17.89■□□□□ 0.45
HLA-DRB1-201ENST00000360004 GALNT12Q8IXK2 581 aa17.89■□□□□ 0.45
HLA-DRB1-201ENST00000360004 LRRC25Q8N386 305 aaPredicted RBP17.89■□□□□ 0.45
HLA-DRB1-201ENST00000360004 SLC39A7Q92504 469 aa17.89■□□□□ 0.45
HLA-DRB1-201ENST00000360004 PPCDCQ96CD2 204 aa17.89■□□□□ 0.45
HLA-DRB1-201ENST00000360004 BRINP2Q9C0B6 783 aa17.89■□□□□ 0.45
HLA-DRB1-201ENST00000360004 SLC25A18Q9H1K4 315 aa17.89■□□□□ 0.45
HLA-DRB1-201ENST00000360004 MEAF6Q9HAF1 191 aa17.89■□□□□ 0.45
HLA-DRB1-201ENST00000360004 EHD3Q9NZN3 535 aa17.89■□□□□ 0.45
HLA-DRB1-201ENST00000360004 BAIAP2L1Q9UHR4 511 aa17.89■□□□□ 0.45
HLA-DRB1-201ENST00000360004 PCDHGB7Q9Y5F8 929 aa17.89■□□□□ 0.45
HLA-DRB1-201ENST00000360004 CLDN16Q9Y5I7 305 aa17.89■□□□□ 0.45
HLA-DRB1-201ENST00000360004 KMT2BQ9UMN6 2715 aaPredicted RBP17.88■□□□□ 0.45
HLA-DRB1-201ENST00000360004 GOLGA8QA0A0J9YX86 632 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms