RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 APOBEC3BQ9UH17 382 aaKnown RBP17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 SH3GLB1Q9Y371 365 aa17.32■□□□□ 0.36
PDLIM7-203ENST00000359895 ARRDC5A6NEK1 342 aa17.31■□□□□ 0.36
PDLIM7-203ENST00000359895 PRAMEF25A6NGN4 478 aa17.31■□□□□ 0.36
PDLIM7-203ENST00000359895 C4orf51C9J302 202 aa17.31■□□□□ 0.36
PDLIM7-203ENST00000359895 TNFSF14O43557 240 aa17.31■□□□□ 0.36
PDLIM7-203ENST00000359895 B4GALT2O60909 372 aa17.31■□□□□ 0.36
PDLIM7-203ENST00000359895 SERPINB7O75635 380 aa17.31■□□□□ 0.36
PDLIM7-203ENST00000359895 MFN2O95140 757 aa17.31■□□□□ 0.36
PDLIM7-203ENST00000359895 TNFP01375 233 aa17.31■□□□□ 0.36
PDLIM7-203ENST00000359895 IGLV3-19P01714 112 aa17.31■□□□□ 0.36
PDLIM7-203ENST00000359895 HOXB3P14651 431 aaPredicted RBP17.31■□□□□ 0.36
PDLIM7-203ENST00000359895 CSNK2A2P19784 350 aaPredicted RBP17.31■□□□□ 0.36
PDLIM7-203ENST00000359895 CD247P20963 164 aa17.31■□□□□ 0.36
PDLIM7-203ENST00000359895 PCSK6P29122 969 aa17.31■□□□□ 0.36
PDLIM7-203ENST00000359895 PPP2R1BP30154 601 aa17.31■□□□□ 0.36
PDLIM7-203ENST00000359895 RPP38P78345 283 aaKnown RBP17.31■□□□□ 0.36
PDLIM7-203ENST00000359895 GNA13Q14344 377 aa17.31■□□□□ 0.36
PDLIM7-203ENST00000359895 MAD2L1BPQ15013 274 aaPredicted RBP17.31■□□□□ 0.36
PDLIM7-203ENST00000359895 EXOC3L2Q2M3D2 409 aa17.31■□□□□ 0.36
PDLIM7-203ENST00000359895 GPR107Q5VW38 600 aa17.31■□□□□ 0.36
PDLIM7-203ENST00000359895 XAF1Q6GPH4 301 aa17.31■□□□□ 0.36
PDLIM7-203ENST00000359895 SLC48A1Q6P1K1 146 aa17.31■□□□□ 0.36
PDLIM7-203ENST00000359895 Q6ZSR6 202 aa17.31■□□□□ 0.36
PDLIM7-203ENST00000359895 ZNF605Q86T29 641 aa17.31■□□□□ 0.36
PDLIM7-203ENST00000359895 ASPGQ86U10 573 aa17.31■□□□□ 0.36
PDLIM7-203ENST00000359895 TRIM48Q8IWZ4 208 aa17.31■□□□□ 0.36
PDLIM7-203ENST00000359895 LGI4Q8N135 537 aa17.31■□□□□ 0.36
PDLIM7-203ENST00000359895 SMYD1Q8NB12 490 aa17.31■□□□□ 0.36
PDLIM7-203ENST00000359895 CNIH3Q8TBE1 160 aa17.31■□□□□ 0.36
PDLIM7-203ENST00000359895 UCN3Q969E3 161 aa17.31■□□□□ 0.36
PDLIM7-203ENST00000359895 THAP11Q96EK4 314 aa17.31■□□□□ 0.36
PDLIM7-203ENST00000359895 FEVQ99581 238 aa17.31■□□□□ 0.36
PDLIM7-203ENST00000359895 MACROD1Q9BQ69 325 aa17.31■□□□□ 0.36
PDLIM7-203ENST00000359895 OR51I1Q9H343 314 aa17.31■□□□□ 0.36
PDLIM7-203ENST00000359895 ZNF556Q9HAH1 456 aa17.31■□□□□ 0.36
PDLIM7-203ENST00000359895 CCNB1IP1Q9NPC3 277 aa17.31■□□□□ 0.36
PDLIM7-203ENST00000359895 ZCCHC3Q9NUD5 404 aaKnown RBP17.31■□□□□ 0.36
PDLIM7-203ENST00000359895 FBXW2Q9UKT8 454 aa17.31■□□□□ 0.36
PDLIM7-203ENST00000359895 ATG4BQ9Y4P1 393 aa17.31■□□□□ 0.36
PDLIM7-203ENST00000359895 SNX11Q9Y5W9 270 aa17.31■□□□□ 0.36
PDLIM7-203ENST00000359895 OR2A25A4D2G3 310 aa17.3■□□□□ 0.36
PDLIM7-203ENST00000359895 SLC28A2O43868 658 aa17.3■□□□□ 0.36
PDLIM7-203ENST00000359895 GADD45GO95257 159 aa17.3■□□□□ 0.36
PDLIM7-203ENST00000359895 AIFM1O95831 613 aa17.3■□□□□ 0.36
PDLIM7-203ENST00000359895 STATHP02808 62 aa17.3■□□□□ 0.36
PDLIM7-203ENST00000359895 ITIH1P19827 911 aa17.3■□□□□ 0.36
PDLIM7-203ENST00000359895 IGFBP4P22692 258 aa17.3■□□□□ 0.36
PDLIM7-203ENST00000359895 CERS1P27544 350 aa17.3■□□□□ 0.36
PDLIM7-203ENST00000359895 LIMS1P48059 325 aa17.3■□□□□ 0.36
PDLIM7-203ENST00000359895 TMBIM6P55061 237 aa17.3■□□□□ 0.36
PDLIM7-203ENST00000359895 ABI3BPQ7Z7G0 1075 aa17.3■□□□□ 0.36
PDLIM7-203ENST00000359895 NRROSQ86YC3 692 aa17.3■□□□□ 0.36
PDLIM7-203ENST00000359895 SLC5A8Q8N695 610 aa17.3■□□□□ 0.36
PDLIM7-203ENST00000359895 OR56A1Q8NGH5 318 aa17.3■□□□□ 0.36
PDLIM7-203ENST00000359895 RAB8BQ92930 207 aa17.3■□□□□ 0.36
PDLIM7-203ENST00000359895 ACER3Q9NUN7 267 aa17.3■□□□□ 0.36
PDLIM7-203ENST00000359895 EBF1Q9UH73 591 aa17.3■□□□□ 0.36
PDLIM7-203ENST00000359895 CES1P1Q9UKY3 287 aa17.3■□□□□ 0.36
PDLIM7-203ENST00000359895 PSME2Q9UL46 239 aa17.3■□□□□ 0.36
PDLIM7-203ENST00000359895 CDC14AQ9UNH5 594 aa17.3■□□□□ 0.36
PDLIM7-203ENST00000359895 KLHL20Q9Y2M5 609 aa17.3■□□□□ 0.36
PDLIM7-203ENST00000359895 PCDHGB1Q9Y5G3 927 aa17.3■□□□□ 0.36
PDLIM7-203ENST00000359895 C5orf42Q9H799 3197 aa17.29■□□□□ 0.36
PDLIM7-203ENST00000359895 FAM221BA6H8Z2 402 aa17.29■□□□□ 0.36
PDLIM7-203ENST00000359895 URADA6NGE7 173 aa17.29■□□□□ 0.36
PDLIM7-203ENST00000359895 PROM1O43490 865 aa17.29■□□□□ 0.36
PDLIM7-203ENST00000359895 ERAL1O75616 437 aaKnown RBP17.29■□□□□ 0.36
PDLIM7-203ENST00000359895 CCNB2O95067 398 aa17.29■□□□□ 0.36
PDLIM7-203ENST00000359895 HTR1AP08908 422 aa17.29■□□□□ 0.36
PDLIM7-203ENST00000359895 SLC35G6P0C7Q6 338 aa17.29■□□□□ 0.36
PDLIM7-203ENST00000359895 POU3F3P20264 500 aaPredicted RBP17.29■□□□□ 0.36
PDLIM7-203ENST00000359895 MATN1P21941 496 aa17.29■□□□□ 0.36
PDLIM7-203ENST00000359895 MPIP34949 423 aa17.29■□□□□ 0.36
PDLIM7-203ENST00000359895 NUDT1P36639 197 aa17.29■□□□□ 0.36
PDLIM7-203ENST00000359895 DUSP7Q16829 419 aa17.29■□□□□ 0.36
PDLIM7-203ENST00000359895 PROX2Q3B8N5 592 aa17.29■□□□□ 0.36
PDLIM7-203ENST00000359895 RPS26P11Q5JNZ5 115 aaPredicted RBP17.29■□□□□ 0.36
PDLIM7-203ENST00000359895 KIAA0895LQ68EN5 471 aa17.29■□□□□ 0.36
PDLIM7-203ENST00000359895 VN1R4Q7Z5H5 301 aa17.29■□□□□ 0.36
PDLIM7-203ENST00000359895 B3GNT8Q7Z7M8 397 aa17.29■□□□□ 0.36
PDLIM7-203ENST00000359895 KRT73Q86Y46 540 aa17.29■□□□□ 0.36
PDLIM7-203ENST00000359895 SLC44A2Q8IWA5 706 aaPredicted RBP17.29■□□□□ 0.36
PDLIM7-203ENST00000359895 FLVCR1-AS1Q8TAF5 88 aa17.29■□□□□ 0.36
PDLIM7-203ENST00000359895 APOBEC4Q8WW27 367 aaKnown RBP17.29■□□□□ 0.36
PDLIM7-203ENST00000359895 OR2A14Q96R47 310 aa17.29■□□□□ 0.36
PDLIM7-203ENST00000359895 GAS2L1Q99501 681 aaPredicted RBP17.29■□□□□ 0.36
PDLIM7-203ENST00000359895 SPATA5L1Q9BVQ7 753 aa17.29■□□□□ 0.36
PDLIM7-203ENST00000359895 GSDMCQ9BYG8 508 aa17.29■□□□□ 0.36
PDLIM7-203ENST00000359895 DUSP21Q9H596 190 aa17.29■□□□□ 0.36
PDLIM7-203ENST00000359895 TRPC4Q9UBN4 977 aa17.29■□□□□ 0.36
PDLIM7-203ENST00000359895 KCND3Q9UK17 655 aa17.29■□□□□ 0.36
PDLIM7-203ENST00000359895 HCN4Q9Y3Q4 1203 aa17.29■□□□□ 0.36
PDLIM7-203ENST00000359895 ARHGEF17Q96PE2 2063 aaPredicted RBP17.29■□□□□ 0.36
PDLIM7-203ENST00000359895 TRBV23OR9-2A0A075B6M9 112 aa17.28■□□□□ 0.36
PDLIM7-203ENST00000359895 OR5K4A6NMS3 321 aa17.28■□□□□ 0.36
PDLIM7-203ENST00000359895 PTGES3LE9PB15 166 aa17.28■□□□□ 0.36
PDLIM7-203ENST00000359895 PGRMC2O15173 223 aa17.28■□□□□ 0.36
PDLIM7-203ENST00000359895 VIPP01282 170 aa17.28■□□□□ 0.36
PDLIM7-203ENST00000359895 FHP07954 510 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms