RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 PYDC2Q56P42 97 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 OR2B11Q5JQS5 317 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 ZNF648Q5T619 568 aaPredicted RBP8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 TMEM107Q6UX40 140 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 CCDC116Q8IYX3 515 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 OR5K1Q8NHB7 308 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 ZNF436Q9C0F3 470 aaPredicted RBP8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 KLK4Q9Y5K2 254 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 OBSL1O75147 1896 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 M0QZQ0 153 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 AIPO00170 330 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 LINC01565O15544 149 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 ORC5O43913 435 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 MFSD11O43934 449 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 EDN3P14138 238 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 IGFBP5P24593 272 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 APEX1P27695 318 aaKnown RBP8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 DEFA5Q01523 94 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 KLHL22Q53GT1 634 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 LCN1P1Q5VSP4 162 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 BLOC1S3Q6QNY0 202 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 ZER1Q7Z7L7 766 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 OXR1Q8N573 874 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 C12orf45Q8N5I9 185 aaPredicted RBP8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 L3MBTL4Q8NA19 623 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 ZNF419Q96HQ0 510 aaPredicted RBP8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 CSPG4P5Q96PW8 444 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 SLC38A3Q99624 504 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 APOL2Q9BQE5 337 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 CNPPD1Q9BV87 410 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 VN1R3Q9BXE9 311 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 ASPNQ9BXN1 380 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 ZCCHC2Q9C0B9 1178 aaKnown RBP8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 SFXN1Q9H9B4 322 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 MYEF2Q9P2K5 600 aaKnown RBP8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 SLC6A5Q9Y345 797 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 CMAHPQ9Y471 501 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 ZNF451Q9Y4E5 1061 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 ASB4Q9Y574 426 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 CHD5Q8TDI0 1954 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 SDK1Q7Z5N4 2213 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 FFAR3O14843 346 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 GPR42O15529 346 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 NIPSNAP2O75323 286 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 C9P02748 559 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 ADRA2AP08913 450 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 IRF1P10914 325 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 GJA1P17302 382 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 RFC3P40938 356 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 EIF2S3P41091 472 aaKnown RBP8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 CASP2P42575 452 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 ZFP36L2P47974 494 aaKnown RBP8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 RNF144AP50876 292 aaPredicted RBP8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 DAPP51397 102 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 VSX2P58304 361 aaPredicted RBP8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 KIAA1024LP59773 190 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 NHLH1Q02575 133 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 TAF10Q12962 218 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 CHAF1BQ13112 559 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 KEAP1Q14145 624 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 PUM1Q14671 1186 aaKnown RBP eCLIP8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 SLC25A52Q3SY17 297 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 C19orf48Q6RUI8 117 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 PIWIL4Q7Z3Z4 852 aaKnown RBP8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 MCATQ8IVS2 390 aaKnown RBP8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 LRRC17Q8N6Y2 441 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 ATP6V1C2Q8NEY4 427 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 PRSS33Q8NF86 280 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 UCN3Q969E3 161 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 IGSF21Q96ID5 467 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 NKX6-2Q9C056 277 aaPredicted RBP8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 RHBGQ9H310 441 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 WDCPQ9H6R7 721 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 SNTG1Q9NSN8 517 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 CDH10Q9Y6N8 788 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 NOTCH4Q99466 2003 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 FAM234BA2RU67 622 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 G3V3Q6 166 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 M0R233 179 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 LYRM1O43325 122 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 KDM4BO94953 1096 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 GADD45GO95257 159 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 ANXA6P08133 673 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 TSPAN19P0C672 248 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 RHCEP18577 417 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 SPAM1P38567 509 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 NBL1P41271 181 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 PTGFRP43088 359 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 PGDP52209 483 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 SPCS3P61009 180 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 SNRPEP62304 92 aaKnown RBP8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 TMEM44Q2T9K0 475 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 HEATR6Q6AI08 1181 aaKnown RBP8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 GCNT7Q6ZNI0 430 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 GPR149Q86SP6 731 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 HIPK1Q86Z02 1210 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 MIER2Q8N344 545 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 IPMKQ8NFU5 416 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 GLYATL2Q8WU03 294 aa8.88□□□□□ -0.99
SMARCAL1-202ENST00000358207 ISG20Q96AZ6 181 aaKnown RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 552.8 ms