RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 C14orf28Q4W4Y0 310 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 SPANXN4Q5MJ08 99 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 ZNF678Q5SXM1 525 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 ELP2Q6IA86 826 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 METTL7AQ9H8H3 244 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 PLEKHA3Q9HB20 300 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 FAM53CQ9NYF3 392 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 ACTR10Q9NZ32 417 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 EEDO75530 441 aaKnown RBP12.34□□□□□ -0.43
SMC4-202ENST00000357388 SIX3O95343 332 aaPredicted RBP12.34□□□□□ -0.43
SMC4-202ENST00000357388 FAM163BP0C2L3 166 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 ACRP10323 421 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 CTHP32929 405 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 MAGEA3P43357 314 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 GPX6P59796 221 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 RAB4BP61018 213 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 MC2RQ01718 297 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 TIGD5Q53EQ6 642 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 NANOGP8Q6NSW7 305 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 ZNF419Q96HQ0 510 aaPredicted RBP12.34□□□□□ -0.43
SMC4-202ENST00000357388 BTF3L4Q96K17 158 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 NANOGQ9H9S0 305 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 ERVK13-1Q9NX77 482 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 CD300AQ9UGN4 299 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 CEP170BQ9Y4F5 1589 aaPredicted RBP12.34□□□□□ -0.43
SMC4-202ENST00000357388 MST1RQ04912 1400 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 GOSR2O14653 212 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 PRAMEF2O60811 474 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 TRAPPC6AO75865 159 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 TGFB1P01137 390 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 ZNF30P17039 623 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 PRKCZQ05513 592 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 MPP7Q5T2T1 576 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 ADGRF1Q5T601 910 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 FAM83HQ6ZRV2 1179 aaPredicted RBP12.34□□□□□ -0.43
SMC4-202ENST00000357388 SVBPQ8N300 66 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 FKBP10Q96AY3 582 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 SLC41A3Q96GZ6 507 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 CDKN2AIPNLQ96HQ2 116 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 ZNF382Q96SR6 550 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 MCHR1Q99705 422 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 FAM86C1Q9NVL1 165 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 NLKQ9UBE8 527 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 YIPF1Q9Y548 306 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 FAM230AA0A1W2PPH8 454 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 A0A1W2PRU2 124 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 CXorf49A8MYA2 514 aaPredicted RBP12.34□□□□□ -0.43
SMC4-202ENST00000357388 PRKCGP05129 697 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 UBBP0CG47 229 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 UBCP0CG48 685 aaKnown RBP12.34□□□□□ -0.43
SMC4-202ENST00000357388 RPL17P18621 184 aaKnown RBP12.34□□□□□ -0.43
SMC4-202ENST00000357388 RPS27AP62979 156 aaKnown RBP12.34□□□□□ -0.43
SMC4-202ENST00000357388 UBA52P62987 128 aaKnown RBP12.34□□□□□ -0.43
SMC4-202ENST00000357388 PLP2Q04941 152 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 NPRL3Q12980 569 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 TSPYL5Q86VY4 417 aaPredicted RBP12.34□□□□□ -0.43
SMC4-202ENST00000357388 OR2T35Q8NGX2 323 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 OR6N1Q8NGY5 312 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 POLDIP3Q9BY77 421 aaKnown RBP12.34□□□□□ -0.43
SMC4-202ENST00000357388 NT5DC2Q9H857 520 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 DMAC2Q9NW81 257 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 NCDNQ9UBB6 729 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 DKKL1Q9UK85 242 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 SYNGR4O95473 234 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 TFP02787 698 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 RHCEP18577 417 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 VIPR1P32241 457 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 ADH7P40394 386 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 TAS2R20P59543 309 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 ZNF763Q0D2J5 394 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 DYRK1AQ13627 763 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 HMGN3Q15651 99 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 RAB11BQ15907 218 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 SLC39A4Q6P5W5 647 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 TMPRSS12Q86WS5 348 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 ARMC5Q96C12 935 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 TGM7Q96PF1 710 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 MROQ9BYG7 248 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 ZNF701Q9NV72 531 aaPredicted RBP12.34□□□□□ -0.43
SMC4-202ENST00000357388 ADAMTS6Q9UKP5 1117 aa12.34□□□□□ -0.43
SMC4-202ENST00000357388 ERI3O43414 337 aaKnown RBP12.33□□□□□ -0.44
SMC4-202ENST00000357388 EVI2BP34910 448 aa12.33□□□□□ -0.44
SMC4-202ENST00000357388 ARSIQ5FYB1 569 aa12.33□□□□□ -0.44
SMC4-202ENST00000357388 NCBP2-AS2Q69YL0 99 aa12.33□□□□□ -0.44
SMC4-202ENST00000357388 KCT2Q8NC54 265 aa12.33□□□□□ -0.44
SMC4-202ENST00000357388 ABHD11Q8NFV4 315 aa12.33□□□□□ -0.44
SMC4-202ENST00000357388 OR6N2Q8NGY6 317 aa12.33□□□□□ -0.44
SMC4-202ENST00000357388 OR8K3Q8NH51 312 aa12.33□□□□□ -0.44
SMC4-202ENST00000357388 MYLIPQ8WY64 445 aa12.33□□□□□ -0.44
SMC4-202ENST00000357388 OR5P2Q8WZ92 322 aa12.33□□□□□ -0.44
SMC4-202ENST00000357388 REEP4Q9H6H4 257 aa12.33□□□□□ -0.44
SMC4-202ENST00000357388 SIX2Q9NPC8 291 aa12.33□□□□□ -0.44
SMC4-202ENST00000357388 ANKMY1Q9P2S6 941 aa12.33□□□□□ -0.44
SMC4-202ENST00000357388 FAM221BA6H8Z2 402 aa12.33□□□□□ -0.44
SMC4-202ENST00000357388 TMEM233B4DJY2 109 aa12.33□□□□□ -0.44
SMC4-202ENST00000357388 EEF1E1-BLOC1S5C9J1V9 151 aa12.33□□□□□ -0.44
SMC4-202ENST00000357388 NIPSNAP2O75323 286 aa12.33□□□□□ -0.44
SMC4-202ENST00000357388 LSSP48449 732 aa12.33□□□□□ -0.44
SMC4-202ENST00000357388 ZNF41P51814 821 aaPredicted RBP12.33□□□□□ -0.44
SMC4-202ENST00000357388 ARHGAP11AQ6P4F7 1023 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms