RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 SLC25A52Q3SY17 297 aa15□□□□□ -0.01
RTN3-205ENST00000356000 MEDAGQ5VYS4 303 aa15□□□□□ -0.01
RTN3-205ENST00000356000 CBLL1Q75N03 491 aa15□□□□□ -0.01
RTN3-205ENST00000356000 ZNF551Q7Z340 670 aaPredicted RBP15□□□□□ -0.01
RTN3-205ENST00000356000 GPR142Q7Z601 462 aa15□□□□□ -0.01
RTN3-205ENST00000356000 L3MBTL4Q8NA19 623 aa15□□□□□ -0.01
RTN3-205ENST00000356000 PROKR2Q8NFJ6 384 aa15□□□□□ -0.01
RTN3-205ENST00000356000 MDGA1Q8NFP4 955 aa15□□□□□ -0.01
RTN3-205ENST00000356000 ADAMTS14Q8WXS8 1223 aa15□□□□□ -0.01
RTN3-205ENST00000356000 HSD17B8Q92506 261 aa15□□□□□ -0.01
RTN3-205ENST00000356000 C7orf34Q96L11 122 aa15□□□□□ -0.01
RTN3-205ENST00000356000 ZDHHC15Q96MV8 337 aa15□□□□□ -0.01
RTN3-205ENST00000356000 FN3KQ9H479 309 aa15□□□□□ -0.01
RTN3-205ENST00000356000 ZNF334Q9HCZ1 680 aaPredicted RBP15□□□□□ -0.01
RTN3-205ENST00000356000 FAM72CH0Y354 149 aa15□□□□□ -0.01
RTN3-205ENST00000356000 CDC7O00311 574 aa15□□□□□ -0.01
RTN3-205ENST00000356000 TO15178 435 aa15□□□□□ -0.01
RTN3-205ENST00000356000 ALDOBP05062 364 aa15□□□□□ -0.01
RTN3-205ENST00000356000 DRD2P14416 443 aa15□□□□□ -0.01
RTN3-205ENST00000356000 CHRNA4P43681 627 aa15□□□□□ -0.01
RTN3-205ENST00000356000 RAG2P55895 527 aa15□□□□□ -0.01
RTN3-205ENST00000356000 TCP10Q12799 353 aa15□□□□□ -0.01
RTN3-205ENST00000356000 CRHR2Q13324 411 aa15□□□□□ -0.01
RTN3-205ENST00000356000 HLXQ14774 488 aaPredicted RBP15□□□□□ -0.01
RTN3-205ENST00000356000 NCF4Q15080 339 aa15□□□□□ -0.01
RTN3-205ENST00000356000 EIF2S3LQ2VIR3 472 aaKnown RBP15□□□□□ -0.01
RTN3-205ENST00000356000 FAM72AQ5TYM5 149 aa15□□□□□ -0.01
RTN3-205ENST00000356000 FAM72DQ6L9T8 149 aa15□□□□□ -0.01
RTN3-205ENST00000356000 FAM72BQ86X60 149 aa15□□□□□ -0.01
RTN3-205ENST00000356000 SYT14Q8NB59 555 aa15□□□□□ -0.01
RTN3-205ENST00000356000 STAG3L4Q8TBR4 150 aa15□□□□□ -0.01
RTN3-205ENST00000356000 SPATA5L1Q9BVQ7 753 aa15□□□□□ -0.01
RTN3-205ENST00000356000 NFKBIZQ9BYH8 718 aa15□□□□□ -0.01
RTN3-205ENST00000356000 GLOD4Q9HC38 313 aa15□□□□□ -0.01
RTN3-205ENST00000356000 FZD3Q9NPG1 666 aa15□□□□□ -0.01
RTN3-205ENST00000356000 PRMT8Q9NR22 394 aaPredicted RBP15□□□□□ -0.01
RTN3-205ENST00000356000 PDGFCQ9NRA1 345 aa15□□□□□ -0.01
RTN3-205ENST00000356000 GALPQ9UBC7 116 aa15□□□□□ -0.01
RTN3-205ENST00000356000 ANXA9O76027 345 aa14.99□□□□□ -0.01
RTN3-205ENST00000356000 SOX30O94993 753 aa14.99□□□□□ -0.01
RTN3-205ENST00000356000 UGT2B7P16662 529 aa14.99□□□□□ -0.01
RTN3-205ENST00000356000 CPEP16870 476 aa14.99□□□□□ -0.01
RTN3-205ENST00000356000 KDELR2P33947 212 aa14.99□□□□□ -0.01
RTN3-205ENST00000356000 PTGFRP43088 359 aa14.99□□□□□ -0.01
RTN3-205ENST00000356000 HTR6P50406 440 aa14.99□□□□□ -0.01
RTN3-205ENST00000356000 SUOXP51687 545 aa14.99□□□□□ -0.01
RTN3-205ENST00000356000 OTUD1Q5VV17 481 aaPredicted RBP14.99□□□□□ -0.01
RTN3-205ENST00000356000 RNLSQ5VYX0 342 aa14.99□□□□□ -0.01
RTN3-205ENST00000356000 ELP2Q6IA86 826 aa14.99□□□□□ -0.01
RTN3-205ENST00000356000 TMEM88Q6PEY1 159 aa14.99□□□□□ -0.01
RTN3-205ENST00000356000 LDB1Q86U70 411 aaPredicted RBP14.99□□□□□ -0.01
RTN3-205ENST00000356000 OR10G2Q8NGC3 310 aa14.99□□□□□ -0.01
RTN3-205ENST00000356000 RFT1Q96AA3 541 aa14.99□□□□□ -0.01
RTN3-205ENST00000356000 OR52E6Q96RD3 313 aa14.99□□□□□ -0.01
RTN3-205ENST00000356000 TAAR1Q96RJ0 339 aa14.99□□□□□ -0.01
RTN3-205ENST00000356000 PPP1R16BQ96T49 567 aa14.99□□□□□ -0.01
RTN3-205ENST00000356000 SPOCK3Q9BQ16 436 aa14.99□□□□□ -0.01
RTN3-205ENST00000356000 THAP7Q9BT49 309 aaPredicted RBP14.99□□□□□ -0.01
RTN3-205ENST00000356000 TMEM106CQ9BVX2 250 aa14.99□□□□□ -0.01
RTN3-205ENST00000356000 ACTR6Q9GZN1 396 aa14.99□□□□□ -0.01
RTN3-205ENST00000356000 SLC45A1Q9Y2W3 748 aa14.99□□□□□ -0.01
RTN3-205ENST00000356000 SSNA1O43805 119 aa14.99□□□□□ -0.01
RTN3-205ENST00000356000 PRKRAO75569 313 aaKnown RBP14.99□□□□□ -0.01
RTN3-205ENST00000356000 PEPDP12955 493 aa14.99□□□□□ -0.01
RTN3-205ENST00000356000 HOXB9P17482 250 aaPredicted RBP14.99□□□□□ -0.01
RTN3-205ENST00000356000 FPR3P25089 353 aa14.99□□□□□ -0.01
RTN3-205ENST00000356000 RIDAP52758 137 aaKnown RBP14.99□□□□□ -0.01
RTN3-205ENST00000356000 PPIGQ13427 754 aaKnown RBP eCLIP14.99□□□□□ -0.01
RTN3-205ENST00000356000 C1DQ13901 141 aaKnown RBP14.99□□□□□ -0.01
RTN3-205ENST00000356000 AVPI1Q5T686 147 aa14.99□□□□□ -0.01
RTN3-205ENST00000356000 OVOS1Q6IE37 1185 aa14.99□□□□□ -0.01
RTN3-205ENST00000356000 IL27RAQ6UWB1 636 aa14.99□□□□□ -0.01
RTN3-205ENST00000356000 OR5M9Q8NGP3 310 aa14.99□□□□□ -0.01
RTN3-205ENST00000356000 TMEM203Q969S6 136 aa14.99□□□□□ -0.01
RTN3-205ENST00000356000 EXOSC8Q96B26 276 aaKnown RBP14.99□□□□□ -0.01
RTN3-205ENST00000356000 FAM193BQ96PV7 902 aaPredicted RBP14.99□□□□□ -0.01
RTN3-205ENST00000356000 FCRL5Q96RD9 977 aa14.99□□□□□ -0.01
RTN3-205ENST00000356000 NIPSNAP1Q9BPW8 284 aa14.99□□□□□ -0.01
RTN3-205ENST00000356000 RLIMQ9NVW2 624 aa14.99□□□□□ -0.01
RTN3-205ENST00000356000 MRTO4Q9UKD2 239 aaKnown RBP14.99□□□□□ -0.01
RTN3-205ENST00000356000 OR6C75A6NL08 312 aa14.98□□□□□ -0.01
RTN3-205ENST00000356000 MCRIP1C9JLW8 97 aa14.98□□□□□ -0.01
RTN3-205ENST00000356000 ECI2O75521 394 aa14.98□□□□□ -0.01
RTN3-205ENST00000356000 SIX6O95475 246 aa14.98□□□□□ -0.01
RTN3-205ENST00000356000 NFICP08651 508 aa14.98□□□□□ -0.01
RTN3-205ENST00000356000 AHCYP23526 432 aa14.98□□□□□ -0.01
RTN3-205ENST00000356000 EIF2S3P41091 472 aaKnown RBP14.98□□□□□ -0.01
RTN3-205ENST00000356000 POU3F4P49335 361 aa14.98□□□□□ -0.01
RTN3-205ENST00000356000 AGTR2P50052 363 aa14.98□□□□□ -0.01
RTN3-205ENST00000356000 CTSCP53634 463 aa14.98□□□□□ -0.01
RTN3-205ENST00000356000 DUSP4Q13115 394 aa14.98□□□□□ -0.01
RTN3-205ENST00000356000 PTCHD4Q6ZW05 846 aa14.98□□□□□ -0.01
RTN3-205ENST00000356000 RHOUQ7L0Q8 258 aa14.98□□□□□ -0.01
RTN3-205ENST00000356000 LDLRAD3Q86YD5 345 aa14.98□□□□□ -0.01
RTN3-205ENST00000356000 PHOSPHO1Q8TCT1 267 aa14.98□□□□□ -0.01
RTN3-205ENST00000356000 MTFMTQ96DP5 389 aaKnown RBP14.98□□□□□ -0.01
RTN3-205ENST00000356000 TSGA13Q96PP4 275 aa14.98□□□□□ -0.01
RTN3-205ENST00000356000 DPY30Q9C005 99 aa14.98□□□□□ -0.01
RTN3-205ENST00000356000 CLMPQ9H6B4 373 aa14.98□□□□□ -0.01
RTN3-205ENST00000356000 POPDC3Q9HBV1 291 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms