RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 KAT8Q9H7Z6 458 aaKnown RBP9.62□□□□□ -0.87
SYNE1-203ENST00000354674 IFT46Q9NQC8 304 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 GPR27Q9NS67 375 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 HRH3Q9Y5N1 445 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 USP34Q70CQ2 3546 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 NUMA1Q14980 2115 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 A0A1W2PQ09 198 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 K7ESF4 209 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 PPP6CO00743 305 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 FPGTO14772 594 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 DSCR3O14972 297 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 TAPBPO15533 448 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 SH3BP5O60239 455 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 FAM20BO75063 409 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 PPM1BO75688 479 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 WDR47O94967 919 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 IFNA16P05015 189 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 CAPN3P20807 821 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 MYL9P24844 172 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 ACADLP28330 430 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 YPEL5P62699 121 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 RPL6Q02878 288 aaKnown RBP9.62□□□□□ -0.87
SYNE1-203ENST00000354674 PRSS42Q7Z5A4 293 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 RAB44Q7Z6P3 723 aaPredicted RBP9.62□□□□□ -0.87
SYNE1-203ENST00000354674 TAGAPQ8N103 731 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 C3orf30Q96M34 536 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 GON7Q9BXV9 100 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 OR52A5Q9H2C5 316 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 ZNF385DQ9H6B1 395 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 SLC23A2Q9UGH3 650 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 PCTPQ9UKL6 214 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 PCOLCE2Q9UKZ9 415 aa9.62□□□□□ -0.87
SYNE1-203ENST00000354674 HMX3A6NHT5 357 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 E2F3O00716 465 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 UBFD1O14562 309 aaKnown RBP9.61□□□□□ -0.87
SYNE1-203ENST00000354674 MRPS14O60783 128 aaKnown RBP9.61□□□□□ -0.87
SYNE1-203ENST00000354674 SIX3O95343 332 aaPredicted RBP9.61□□□□□ -0.87
SYNE1-203ENST00000354674 EPHA2P29317 976 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 PDHA2P29803 388 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 AKT2P31751 481 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 TALDO1P37837 337 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 PREPP48147 710 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 NUDT6P53370 316 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 GRIK2Q13002 908 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 NFYCQ13952 458 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 NFATC4Q14934 902 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 SYTL3Q4VX76 610 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 METRNLQ641Q3 311 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 FAM83HQ6ZRV2 1179 aaPredicted RBP9.61□□□□□ -0.87
SYNE1-203ENST00000354674 UBE2R2Q712K3 238 aaPredicted RBP9.61□□□□□ -0.87
SYNE1-203ENST00000354674 CFAP206Q8IYR0 622 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 CNDP2Q96KP4 475 aaKnown RBP9.61□□□□□ -0.87
SYNE1-203ENST00000354674 OR2A14Q96R47 310 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 TIMM29Q9BSF4 260 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 LIN7BQ9HAP6 207 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 MCUBQ9NWR8 336 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 TMCC3Q9ULS5 477 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 COPS3Q9UNS2 423 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 BTRCQ9Y297 605 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 TNPO3Q9Y5L0 923 aaKnown RBP9.61□□□□□ -0.87
SYNE1-203ENST00000354674 TRAV6A0A075B6T7 132 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 TEX51A0A1B0GUA7 166 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 LOC100130705A0A1B0GUX0 176 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 LRRC14BA6NHZ5 514 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 METTL15A6NJ78 407 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 PRAMEF26H0Y7S4 382 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 CACNB4O00305 520 aaPredicted RBP9.61□□□□□ -0.87
SYNE1-203ENST00000354674 DIRAS1O95057 198 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 ALPLP05186 524 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 RPIAP49247 311 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 AGTR2P50052 363 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 AP1S2P56377 157 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 CLDN2P57739 230 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 OR4D2P58180 307 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 ZC3H12BQ5HYM0 836 aaKnown RBP9.61□□□□□ -0.87
SYNE1-203ENST00000354674 RBM48Q5RL73 367 aaKnown RBP9.61□□□□□ -0.87
SYNE1-203ENST00000354674 DOK6Q6PKX4 331 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 AMZ2Q86W34 360 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 ZFAND1Q8TCF1 268 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 SDHCQ99643 169 aaPredicted RBP9.61□□□□□ -0.87
SYNE1-203ENST00000354674 TBCDQ9BTW9 1192 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 ACTR6Q9GZN1 396 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 ZNF556Q9HAH1 456 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 EML4Q9HC35 981 aaKnown RBP9.61□□□□□ -0.87
SYNE1-203ENST00000354674 NECTIN3Q9NQS3 549 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 TAS2R16Q9NYV7 291 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 EIF3KQ9UBQ5 218 aaKnown RBP9.61□□□□□ -0.87
SYNE1-203ENST00000354674 TSR3Q9UJK0 312 aaKnown RBP9.61□□□□□ -0.87
SYNE1-203ENST00000354674 ASB1Q9Y576 335 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 TNFRSF10CO14798 259 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 HOXA6P31267 233 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 ALDH3A2P51648 485 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 TEKQ02763 1124 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 PCDH1Q08174 1060 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 ZXDCQ2QGD7 858 aaPredicted RBP9.61□□□□□ -0.87
SYNE1-203ENST00000354674 ANKS6Q68DC2 871 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 KLHDC8AQ8IYD2 350 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 FRMD1Q8N878 549 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 CADM4Q8NFZ8 388 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 PPM1MQ96MI6 270 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms