RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 M6PRP20645 277 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 KCNJ5P48544 419 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 RAB40BQ12829 278 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 FAM209AQ5JX71 171 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 SIGIRRQ6IA17 410 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 CEACAM20Q6UY09 585 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 TMEM150AQ86TG1 271 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 TCEANCQ8N8B7 351 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 YIPF7Q8N8F6 280 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 C19orf18Q8NEA5 215 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 BCL7CQ8WUZ0 217 aaPredicted RBP10.85□□□□□ -0.67
CAPN9-202ENST00000354537 OR5P2Q8WZ92 322 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 CIDECQ96AQ7 238 aaPredicted RBP10.85□□□□□ -0.67
CAPN9-202ENST00000354537 RNF31Q96EP0 1072 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 LMLNQ96KR4 655 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 ZNF354BQ96LW1 612 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 IRF2BPLQ9H1B7 796 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 RHCGQ9UBD6 479 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 ACSL6Q9UKU0 697 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 EXOSC1Q9Y3B2 195 aaKnown RBP10.85□□□□□ -0.67
CAPN9-202ENST00000354537 DYRK1BQ9Y463 629 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 TRDV1A0A1B0GX56 115 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 H3BN98 237 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 SGK494L7N484 410 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 ERVH48-1M5A8F1 160 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 ATG13O75143 517 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 CELF2O95319 508 aaKnown RBP10.85□□□□□ -0.67
CAPN9-202ENST00000354537 SLC16A8O95907 504 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 TP53P04637 393 aaPredicted RBP10.85□□□□□ -0.67
CAPN9-202ENST00000354537 FAM157BP0CG42 384 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 MYL12AP19105 171 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 GABRA5P31644 462 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 CLDN20P56880 219 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 DAB2P98082 770 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 CYP27C1Q4G0S4 372 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 TRIQKQ629K1 86 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 ADNP2Q6IQ32 1131 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 OTOP2Q7RTS6 562 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 GPR65Q8IYL9 337 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 HS6ST3Q8IZP7 471 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 GPR32P1Q8NGA4 272 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 NEIL2Q969S2 332 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 MARVELD1Q9BSK0 173 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 ZSCAN5AQ9BUG6 496 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 KATNB1Q9BVA0 655 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 SGPP1Q9BX95 441 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 GIMAP4Q9NUV9 329 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 STMN3Q9NZ72 180 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 A0A1W2PRQ8 180 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 PIPSLA2A3N6 862 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 WASH3PC4AMC7 463 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 WWP2O00308 870 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 GSTM3P21266 225 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 CTGFP29279 349 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 VIPR1P32241 457 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 CD70P32970 193 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 ACLYP53396 1101 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 GAS1P54826 345 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 CASP9P55211 416 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 TAS2R50P59544 299 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 CD83Q01151 205 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 SF3A2Q15428 464 aaKnown RBP10.84□□□□□ -0.67
CAPN9-202ENST00000354537 LEXMQ3ZCV2 418 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 C22orf42Q6IC83 251 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 BRAT1Q6PJG6 821 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 MRGPREQ86SM8 312 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 TMEM173Q86WV6 379 aaPredicted RBP10.84□□□□□ -0.67
CAPN9-202ENST00000354537 CRIPAKQ8N1N5 446 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 UBASH3BQ8TF42 649 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 UFD1Q92890 307 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 AP2M1Q96CW1 435 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 CHFRQ96EP1 664 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 ZNF764Q96H86 408 aaPredicted RBP10.84□□□□□ -0.67
CAPN9-202ENST00000354537 TMEM169Q96HH4 297 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 ZNF607Q96SK3 696 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 EPHX3Q9H6B9 360 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 TRIM39Q9HCM9 518 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 ORC5O43913 435 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 MMP20O60882 483 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 CRYZL1O95825 349 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 SLC10A3P09131 477 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 ACP2P11117 423 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 SLC2A2P11168 524 aaPredicted RBP10.84□□□□□ -0.67
CAPN9-202ENST00000354537 NPPBP16860 134 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 GALP22466 123 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 SOAT1P35610 550 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 ETV5P41161 510 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 PRLHRP49683 370 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 GATMP50440 423 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 ETV1P50549 477 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 CDK5Q00535 292 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 MC1RQ01726 317 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 SLBPQ14493 270 aaKnown RBP eCLIP10.84□□□□□ -0.67
CAPN9-202ENST00000354537 TATDN3Q17R31 274 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 SYT14P1Q58G82 188 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 ZNF648Q5T619 568 aaPredicted RBP10.84□□□□□ -0.67
CAPN9-202ENST00000354537 MZT2AQ6P582 158 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 TMPRSS11BQ86T26 416 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 RNF180Q86T96 592 aa10.84□□□□□ -0.67
CAPN9-202ENST00000354537 IFNL1Q8IU54 200 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms