RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 PPP5CP53041 499 aa20.98■□□□□ 0.95
UPF3A-201ENST00000351487 FBXO46Q6PJ61 603 aaPredicted RBP20.98■□□□□ 0.95
UPF3A-201ENST00000351487 PTCHD4Q6ZW05 846 aa20.98■□□□□ 0.95
UPF3A-201ENST00000351487 CREB3L4Q8TEY5 395 aa20.98■□□□□ 0.95
UPF3A-201ENST00000351487 WDR26Q9H7D7 661 aa20.98■□□□□ 0.95
UPF3A-201ENST00000351487 ZSCAN32Q9NX65 697 aa20.98■□□□□ 0.95
UPF3A-201ENST00000351487 EHD3Q9NZN3 535 aa20.98■□□□□ 0.95
UPF3A-201ENST00000351487 CCDC59Q9P031 241 aaKnown RBP20.98■□□□□ 0.95
UPF3A-201ENST00000351487 WDR37Q9Y2I8 494 aa20.98■□□□□ 0.95
UPF3A-201ENST00000351487 KLK4Q9Y5K2 254 aa20.98■□□□□ 0.95
UPF3A-201ENST00000351487 LCMT2O60294 686 aaKnown RBP20.97■□□□□ 0.95
UPF3A-201ENST00000351487 CNOT3O75175 753 aaKnown RBP20.97■□□□□ 0.95
UPF3A-201ENST00000351487 ALOX5P09917 674 aa20.97■□□□□ 0.95
UPF3A-201ENST00000351487 DRD2P14416 443 aa20.97■□□□□ 0.95
UPF3A-201ENST00000351487 TRIM23P36406 574 aa20.97■□□□□ 0.95
UPF3A-201ENST00000351487 EIF2DP41214 584 aaKnown RBP20.97■□□□□ 0.95
UPF3A-201ENST00000351487 ILKQ13418 452 aa20.97■□□□□ 0.95
UPF3A-201ENST00000351487 MLF2Q15773 248 aaPredicted RBP20.97■□□□□ 0.95
UPF3A-201ENST00000351487 OR4C11Q6IEV9 310 aa20.97■□□□□ 0.95
UPF3A-201ENST00000351487 EGFL6Q8IUX8 553 aa20.97■□□□□ 0.95
UPF3A-201ENST00000351487 AMER2Q8N7J2 671 aa20.97■□□□□ 0.95
UPF3A-201ENST00000351487 ST13P5Q8NFI4 369 aaPredicted RBP20.97■□□□□ 0.95
UPF3A-201ENST00000351487 UCK2Q9BZX2 261 aa20.97■□□□□ 0.95
UPF3A-201ENST00000351487 FZD3Q9NPG1 666 aa20.97■□□□□ 0.95
UPF3A-201ENST00000351487 MBNL1Q9NR56 388 aaKnown RBP20.97■□□□□ 0.95
UPF3A-201ENST00000351487 P2RX2Q9UBL9 471 aa20.97■□□□□ 0.95
UPF3A-201ENST00000351487 PRKAG2Q9UGJ0 569 aa20.97■□□□□ 0.95
UPF3A-201ENST00000351487 SNX11Q9Y5W9 270 aa20.97■□□□□ 0.95
UPF3A-201ENST00000351487 IGKV1-8A0A0C4DH67 115 aa20.97■□□□□ 0.95
UPF3A-201ENST00000351487 MID1O15344 667 aa20.97■□□□□ 0.95
UPF3A-201ENST00000351487 SH3BP5O60239 455 aa20.97■□□□□ 0.95
UPF3A-201ENST00000351487 PCDH8O95206 1070 aa20.97■□□□□ 0.95
UPF3A-201ENST00000351487 H1F0P07305 194 aaKnown RBP20.97■□□□□ 0.95
UPF3A-201ENST00000351487 SNRPGP62308 76 aaKnown RBP20.97■□□□□ 0.95
UPF3A-201ENST00000351487 PRDX1Q06830 199 aaKnown RBP20.97■□□□□ 0.95
UPF3A-201ENST00000351487 TP53BP2Q13625 1128 aa20.97■□□□□ 0.95
UPF3A-201ENST00000351487 SEC23BQ15437 767 aa20.97■□□□□ 0.95
UPF3A-201ENST00000351487 DCST1Q5T197 706 aa20.97■□□□□ 0.95
UPF3A-201ENST00000351487 TUBA3EQ6PEY2 450 aa20.97■□□□□ 0.95
UPF3A-201ENST00000351487 C19orf48Q6RUI8 117 aa20.97■□□□□ 0.95
UPF3A-201ENST00000351487 SNX29P2Q8IUI4 249 aa20.97■□□□□ 0.95
UPF3A-201ENST00000351487 TTLQ8NG68 377 aa20.97■□□□□ 0.95
UPF3A-201ENST00000351487 TEFMQ96QE5 360 aaKnown RBP20.97■□□□□ 0.95
UPF3A-201ENST00000351487 TREX2Q9BQ50 279 aaPredicted RBP20.97■□□□□ 0.95
UPF3A-201ENST00000351487 FUZQ9BT04 418 aa20.97■□□□□ 0.95
UPF3A-201ENST00000351487 TRNAU1APQ9NX07 287 aaKnown RBP20.97■□□□□ 0.95
UPF3A-201ENST00000351487 IFT52Q9Y366 437 aa20.97■□□□□ 0.95
UPF3A-201ENST00000351487 GPC6Q9Y625 555 aaPredicted RBP20.97■□□□□ 0.95
UPF3A-201ENST00000351487 KRBA1A5PL33 1030 aa20.96■□□□□ 0.95
UPF3A-201ENST00000351487 CST6Q15828 149 aa20.96■□□□□ 0.95
UPF3A-201ENST00000351487 AMER3Q8N944 861 aa20.96■□□□□ 0.95
UPF3A-201ENST00000351487 C12orf66Q96MD2 445 aa20.96■□□□□ 0.95
UPF3A-201ENST00000351487 FERD3LQ96RJ6 166 aa20.96■□□□□ 0.95
UPF3A-201ENST00000351487 INSM2Q96T92 566 aaPredicted RBP20.96■□□□□ 0.95
UPF3A-201ENST00000351487 AICDAQ9GZX7 198 aa20.96■□□□□ 0.95
UPF3A-201ENST00000351487 ARMC7Q9H6L4 198 aa20.96■□□□□ 0.95
UPF3A-201ENST00000351487 OR1A2Q9Y585 309 aa20.96■□□□□ 0.95
UPF3A-201ENST00000351487 DSCR3O14972 297 aa20.96■□□□□ 0.95
UPF3A-201ENST00000351487 ZW10O43264 779 aa20.96■□□□□ 0.95
UPF3A-201ENST00000351487 SERPINB7O75635 380 aa20.96■□□□□ 0.95
UPF3A-201ENST00000351487 KAT7O95251 611 aa20.96■□□□□ 0.95
UPF3A-201ENST00000351487 ADRA2AP08913 450 aa20.96■□□□□ 0.95
UPF3A-201ENST00000351487 GJA4P35212 333 aa20.96■□□□□ 0.95
UPF3A-201ENST00000351487 RAB28P51157 221 aa20.96■□□□□ 0.95
UPF3A-201ENST00000351487 IRF4Q15306 451 aa20.96■□□□□ 0.95
UPF3A-201ENST00000351487 TMEM201Q5SNT2 666 aa20.96■□□□□ 0.95
UPF3A-201ENST00000351487 SLX4IPQ5VYV7 408 aa20.96■□□□□ 0.95
UPF3A-201ENST00000351487 PLAG1Q6DJT9 500 aa20.96■□□□□ 0.95
UPF3A-201ENST00000351487 PLEKHG7Q6ZR37 379 aa20.96■□□□□ 0.95
UPF3A-201ENST00000351487 TP53I13Q8NBR0 393 aaPredicted RBP20.96■□□□□ 0.95
UPF3A-201ENST00000351487 OR4D11Q8NGI4 311 aa20.96■□□□□ 0.95
UPF3A-201ENST00000351487 OR2A1Q8NGT9 310 aa20.96■□□□□ 0.95
UPF3A-201ENST00000351487 SLC35G5Q96KT7 338 aa20.96■□□□□ 0.95
UPF3A-201ENST00000351487 RSPH9Q9H1X1 276 aaPredicted RBP20.96■□□□□ 0.95
UPF3A-201ENST00000351487 OR51E2Q9H255 320 aa20.96■□□□□ 0.95
UPF3A-201ENST00000351487 GLIPR2Q9H4G4 154 aa20.96■□□□□ 0.95
UPF3A-201ENST00000351487 SLC25A19Q9HC21 320 aa20.96■□□□□ 0.95
UPF3A-201ENST00000351487 SEMA3GQ9NS98 782 aa20.96■□□□□ 0.95
UPF3A-201ENST00000351487 GDE1Q9NZC3 331 aa20.96■□□□□ 0.95
UPF3A-201ENST00000351487 SEC14L3Q9UDX4 400 aa20.96■□□□□ 0.95
UPF3A-201ENST00000351487 PRAMEF27A3QJZ7 478 aa20.95■□□□□ 0.94
UPF3A-201ENST00000351487 LRIT2A6NDA9 550 aa20.95■□□□□ 0.94
UPF3A-201ENST00000351487 TLR4O00206 839 aa20.95■□□□□ 0.94
UPF3A-201ENST00000351487 TAF4O00268 1085 aa20.95■□□□□ 0.94
UPF3A-201ENST00000351487 ACP5P13686 325 aa20.95■□□□□ 0.94
UPF3A-201ENST00000351487 MYOGP15173 224 aa20.95■□□□□ 0.94
UPF3A-201ENST00000351487 MAGEA8P43361 318 aa20.95■□□□□ 0.94
UPF3A-201ENST00000351487 SMIM11AP58511 58 aa20.95■□□□□ 0.94
UPF3A-201ENST00000351487 LEXMQ3ZCV2 418 aa20.95■□□□□ 0.94
UPF3A-201ENST00000351487 TMEM35AQ53FP2 167 aa20.95■□□□□ 0.94
UPF3A-201ENST00000351487 NDUFAF5Q5TEU4 345 aa20.95■□□□□ 0.94
UPF3A-201ENST00000351487 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.95■□□□□ 0.94
UPF3A-201ENST00000351487 AMDHD1Q96NU7 426 aa20.95■□□□□ 0.94
UPF3A-201ENST00000351487 TIMM29Q9BSF4 260 aa20.95■□□□□ 0.94
UPF3A-201ENST00000351487 DPH7Q9BTV6 452 aa20.95■□□□□ 0.94
UPF3A-201ENST00000351487 SFXN1Q9H9B4 322 aa20.95■□□□□ 0.94
UPF3A-201ENST00000351487 TAS2R16Q9NYV7 291 aa20.95■□□□□ 0.94
UPF3A-201ENST00000351487 SLC28A2O43868 658 aa20.94■□□□□ 0.94
UPF3A-201ENST00000351487 SLITRK5O94991 958 aa20.94■□□□□ 0.94
UPF3A-201ENST00000351487 PKLRP30613 574 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms