RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 ACER3Q9NUN7 267 aa15.8■□□□□ 0.12
SAMM50-201ENST00000350028 P2RX2Q9UBL9 471 aa15.8■□□□□ 0.12
SAMM50-201ENST00000350028 KLHL20Q9Y2M5 609 aa15.8■□□□□ 0.12
SAMM50-201ENST00000350028 ATG4BQ9Y4P1 393 aa15.8■□□□□ 0.12
SAMM50-201ENST00000350028 PCDHGB1Q9Y5G3 927 aa15.8■□□□□ 0.12
SAMM50-201ENST00000350028 C10orf142B7Z368 130 aa15.8■□□□□ 0.12
SAMM50-201ENST00000350028 PTGES3LE9PB15 166 aa15.8■□□□□ 0.12
SAMM50-201ENST00000350028 GADD45GO95257 159 aa15.8■□□□□ 0.12
SAMM50-201ENST00000350028 ASGR2P07307 311 aa15.8■□□□□ 0.12
SAMM50-201ENST00000350028 HTR1AP08908 422 aa15.8■□□□□ 0.12
SAMM50-201ENST00000350028 ITIH1P19827 911 aa15.8■□□□□ 0.12
SAMM50-201ENST00000350028 LIMS1P48059 325 aa15.8■□□□□ 0.12
SAMM50-201ENST00000350028 TMBIM6P55061 237 aa15.8■□□□□ 0.12
SAMM50-201ENST00000350028 RGS1Q08116 209 aa15.8■□□□□ 0.12
SAMM50-201ENST00000350028 DUSP7Q16829 419 aa15.8■□□□□ 0.12
SAMM50-201ENST00000350028 RPS26P11Q5JNZ5 115 aaPredicted RBP15.8■□□□□ 0.12
SAMM50-201ENST00000350028 BHLHB9Q6PI77 547 aa15.8■□□□□ 0.12
SAMM50-201ENST00000350028 B3GNT8Q7Z7M8 397 aa15.8■□□□□ 0.12
SAMM50-201ENST00000350028 LGI4Q8N135 537 aa15.8■□□□□ 0.12
SAMM50-201ENST00000350028 FAM3CQ92520 227 aa15.8■□□□□ 0.12
SAMM50-201ENST00000350028 SGCDQ92629 289 aa15.8■□□□□ 0.12
SAMM50-201ENST00000350028 PROX1Q92786 737 aa15.8■□□□□ 0.12
SAMM50-201ENST00000350028 GAL3ST3Q96A11 431 aa15.8■□□□□ 0.12
SAMM50-201ENST00000350028 OR51I1Q9H343 314 aa15.8■□□□□ 0.12
SAMM50-201ENST00000350028 DUSP21Q9H596 190 aa15.8■□□□□ 0.12
SAMM50-201ENST00000350028 LIN28AQ9H9Z2 209 aaKnown RBP15.8■□□□□ 0.12
SAMM50-201ENST00000350028 ZCCHC3Q9NUD5 404 aaKnown RBP15.8■□□□□ 0.12
SAMM50-201ENST00000350028 GIMAP4Q9NUV9 329 aa15.8■□□□□ 0.12
SAMM50-201ENST00000350028 USP36Q9P275 1121 aaKnown RBP15.8■□□□□ 0.12
SAMM50-201ENST00000350028 FBXW2Q9UKT8 454 aa15.8■□□□□ 0.12
SAMM50-201ENST00000350028 ENTPD4Q9Y227 616 aa15.8■□□□□ 0.12
SAMM50-201ENST00000350028 F5P12259 2224 aa15.79■□□□□ 0.12
SAMM50-201ENST00000350028 TRBV23OR9-2A0A075B6M9 112 aa15.79■□□□□ 0.12
SAMM50-201ENST00000350028 PGRMC2O15173 223 aa15.79■□□□□ 0.12
SAMM50-201ENST00000350028 TNFSF14O43557 240 aa15.79■□□□□ 0.12
SAMM50-201ENST00000350028 ERAL1O75616 437 aaKnown RBP15.79■□□□□ 0.12
SAMM50-201ENST00000350028 SERPINB7O75635 380 aa15.79■□□□□ 0.12
SAMM50-201ENST00000350028 AIFM1O95831 613 aa15.79■□□□□ 0.12
SAMM50-201ENST00000350028 TNFP01375 233 aa15.79■□□□□ 0.12
SAMM50-201ENST00000350028 CSNK2A2P19784 350 aaPredicted RBP15.79■□□□□ 0.12
SAMM50-201ENST00000350028 MATN1P21941 496 aa15.79■□□□□ 0.12
SAMM50-201ENST00000350028 IGFBP4P22692 258 aa15.79■□□□□ 0.12
SAMM50-201ENST00000350028 RABIFP47224 123 aa15.79■□□□□ 0.12
SAMM50-201ENST00000350028 KHKP50053 298 aa15.79■□□□□ 0.12
SAMM50-201ENST00000350028 CCR5P51681 352 aa15.79■□□□□ 0.12
SAMM50-201ENST00000350028 CCINQ13939 588 aa15.79■□□□□ 0.12
SAMM50-201ENST00000350028 MAPK11Q15759 364 aa15.79■□□□□ 0.12
SAMM50-201ENST00000350028 CYP27C1Q4G0S4 372 aa15.79■□□□□ 0.12
SAMM50-201ENST00000350028 GTF2IRD2BQ6EKJ0 949 aa15.79■□□□□ 0.12
SAMM50-201ENST00000350028 SLC48A1Q6P1K1 146 aa15.79■□□□□ 0.12
SAMM50-201ENST00000350028 Q6ZSR6 202 aa15.79■□□□□ 0.12
SAMM50-201ENST00000350028 ASPGQ86U10 573 aa15.79■□□□□ 0.12
SAMM50-201ENST00000350028 GTF2IRD2Q86UP8 949 aa15.79■□□□□ 0.12
SAMM50-201ENST00000350028 NRROSQ86YC3 692 aa15.79■□□□□ 0.12
SAMM50-201ENST00000350028 SLC44A2Q8IWA5 706 aaPredicted RBP15.79■□□□□ 0.12
SAMM50-201ENST00000350028 ROGDIQ9GZN7 287 aa15.79■□□□□ 0.12
SAMM50-201ENST00000350028 LHPPQ9H008 270 aa15.79■□□□□ 0.12
SAMM50-201ENST00000350028 SERHL2Q9H4I8 314 aa15.79■□□□□ 0.12
SAMM50-201ENST00000350028 ZNF556Q9HAH1 456 aa15.79■□□□□ 0.12
SAMM50-201ENST00000350028 PAK1IP1Q9NWT1 392 aaPredicted RBP15.79■□□□□ 0.12
SAMM50-201ENST00000350028 ANKMY1Q9P2S6 941 aa15.79■□□□□ 0.12
SAMM50-201ENST00000350028 CES1P1Q9UKY3 287 aa15.79■□□□□ 0.12
SAMM50-201ENST00000350028 PNMA8BQ9ULN7 279 aaPredicted RBP15.79■□□□□ 0.12
SAMM50-201ENST00000350028 HCN4Q9Y3Q4 1203 aa15.79■□□□□ 0.12
SAMM50-201ENST00000350028 OR2A25A4D2G3 310 aa15.78■□□□□ 0.12
SAMM50-201ENST00000350028 ARRDC5A6NEK1 342 aa15.78■□□□□ 0.12
SAMM50-201ENST00000350028 TRIM64BA6NI03 449 aa15.78■□□□□ 0.12
SAMM50-201ENST00000350028 PRAMEF26H0Y7S4 382 aa15.78■□□□□ 0.12
SAMM50-201ENST00000350028 H3BMQ9 156 aa15.78■□□□□ 0.12
SAMM50-201ENST00000350028 J3KTA2 159 aa15.78■□□□□ 0.12
SAMM50-201ENST00000350028 PROM1O43490 865 aa15.78■□□□□ 0.12
SAMM50-201ENST00000350028 SLC28A2O43868 658 aa15.78■□□□□ 0.12
SAMM50-201ENST00000350028 XPNPEP2O43895 674 aa15.78■□□□□ 0.12
SAMM50-201ENST00000350028 CCNB2O95067 398 aa15.78■□□□□ 0.12
SAMM50-201ENST00000350028 RECKO95980 971 aa15.78■□□□□ 0.12
SAMM50-201ENST00000350028 OR12D1P0DN82 309 aa15.78■□□□□ 0.12
SAMM50-201ENST00000350028 CERS1P27544 350 aa15.78■□□□□ 0.12
SAMM50-201ENST00000350028 PPP2R1BP30154 601 aa15.78■□□□□ 0.12
SAMM50-201ENST00000350028 FMO3P31513 532 aa15.78■□□□□ 0.12
SAMM50-201ENST00000350028 GGT2P36268 569 aa15.78■□□□□ 0.12
SAMM50-201ENST00000350028 KCNJ5P48544 419 aa15.78■□□□□ 0.12
SAMM50-201ENST00000350028 RAB8AP61006 207 aa15.78■□□□□ 0.12
SAMM50-201ENST00000350028 ILF3Q12906 894 aaKnown RBP eCLIP15.78■□□□□ 0.12
SAMM50-201ENST00000350028 PROX2Q3B8N5 592 aa15.78■□□□□ 0.12
SAMM50-201ENST00000350028 VN1R4Q7Z5H5 301 aa15.78■□□□□ 0.12
SAMM50-201ENST00000350028 ABI3BPQ7Z7G0 1075 aa15.78■□□□□ 0.12
SAMM50-201ENST00000350028 GPR32P1Q8NGA4 272 aa15.78■□□□□ 0.12
SAMM50-201ENST00000350028 OR56A1Q8NGH5 318 aa15.78■□□□□ 0.12
SAMM50-201ENST00000350028 OR52J3Q8NH60 311 aa15.78■□□□□ 0.12
SAMM50-201ENST00000350028 FLVCR1-AS1Q8TAF5 88 aa15.78■□□□□ 0.12
SAMM50-201ENST00000350028 APOBEC4Q8WW27 367 aaKnown RBP15.78■□□□□ 0.12
SAMM50-201ENST00000350028 HMGB4Q8WW32 186 aa15.78■□□□□ 0.12
SAMM50-201ENST00000350028 MUL1Q969V5 352 aa15.78■□□□□ 0.12
SAMM50-201ENST00000350028 THAP11Q96EK4 314 aa15.78■□□□□ 0.12
SAMM50-201ENST00000350028 COG8Q96MW5 612 aa15.78■□□□□ 0.12
SAMM50-201ENST00000350028 OR2A14Q96R47 310 aa15.78■□□□□ 0.12
SAMM50-201ENST00000350028 POLMQ9NP87 494 aaPredicted RBP15.78■□□□□ 0.12
SAMM50-201ENST00000350028 CCNB1IP1Q9NPC3 277 aa15.78■□□□□ 0.12
SAMM50-201ENST00000350028 TRPC4Q9UBN4 977 aa15.78■□□□□ 0.12
SAMM50-201ENST00000350028 ENOPH1Q9UHY7 261 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms