RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 HAVCR1Q96D42 359 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 TRMT2BQ96GJ1 504 aaKnown RBP10.41□□□□□ -0.74
CLCN6-202ENST00000346436 DMRTB1Q96MA1 342 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 AMDHD1Q96NU7 426 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 DPH2Q9BQC3 489 aaPredicted RBP10.41□□□□□ -0.74
CLCN6-202ENST00000346436 DYNLRB1Q9NP97 96 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 RHCGQ9UBD6 479 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 EVPLQ92817 2033 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 MPZL2O60487 215 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 TNFRSF21O75509 655 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 AK1P00568 194 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 HOXB9P17482 250 aaPredicted RBP10.41□□□□□ -0.74
CLCN6-202ENST00000346436 ERVPABLB-1P60509 514 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 TIGD6Q17RP2 521 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 RNASE12Q5GAN4 147 aaKnown RBP10.41□□□□□ -0.74
CLCN6-202ENST00000346436 KDELC1Q6UW63 502 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 TMIEQ8NEW7 156 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 OR13J1Q8NGT2 312 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 PYURFQ96I23 114 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 HSH2DQ96JZ2 352 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 SFXN2Q96NB2 322 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 FCRL4Q96PJ5 515 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 CRNNQ9UBG3 495 aaPredicted RBP10.41□□□□□ -0.74
CLCN6-202ENST00000346436 MAN2B2Q9Y2E5 1009 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 MKRN2OSH3BPM6 223 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 RFXAPO00287 272 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 MITFO75030 526 aaPredicted RBP10.41□□□□□ -0.74
CLCN6-202ENST00000346436 NME6O75414 186 aaPredicted RBP10.41□□□□□ -0.74
CLCN6-202ENST00000346436 CLPXO76031 633 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 APOC1P02654 83 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 GPX3P22352 226 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 CLEC14AQ86T13 490 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 GALNT12Q8IXK2 581 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 ZNF440Q8IYI8 595 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 FAM210AQ96ND0 272 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 ING3Q9NXR8 418 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 TMEM181Q9P2C4 612 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 LRIT1Q9P2V4 623 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 ERVK-18Q9QC07 812 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 CLEC4AQ9UMR7 237 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 ABCA3Q99758 1704 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 KCNK5O95279 499 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 GJA4P35212 333 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 RACK1P63244 317 aaKnown RBP10.41□□□□□ -0.74
CLCN6-202ENST00000346436 SLC7A9P82251 487 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 SLC36A3Q495N2 470 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 IFI44LQ53G44 452 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 MPP7Q5T2T1 576 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 LINC00471Q8N535 108 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 DRAXINQ8NBI3 349 aaPredicted RBP10.41□□□□□ -0.74
CLCN6-202ENST00000346436 FAM110BQ8TC76 370 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 SPPL3Q8TCT6 385 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 MUCL1Q96DR8 90 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 MYRFLQ96LU7 910 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 ULBP3Q9BZM4 244 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 BRF2Q9HAW0 419 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 TREX1Q9NSU2 369 aa10.41□□□□□ -0.74
CLCN6-202ENST00000346436 SMIM30A4D0T7 59 aa10.4□□□□□ -0.74
CLCN6-202ENST00000346436 VSTM2BA6NLU5 285 aa10.4□□□□□ -0.74
CLCN6-202ENST00000346436 CAPN5O15484 640 aaPredicted RBP10.4□□□□□ -0.74
CLCN6-202ENST00000346436 HMGN1P05114 100 aa10.4□□□□□ -0.74
CLCN6-202ENST00000346436 OR2B6P58173 313 aa10.4□□□□□ -0.74
CLCN6-202ENST00000346436 DUSP6Q16828 381 aa10.4□□□□□ -0.74
CLCN6-202ENST00000346436 ZSWIM7Q19AV6 140 aa10.4□□□□□ -0.74
CLCN6-202ENST00000346436 HMBOX1Q6NT76 420 aa10.4□□□□□ -0.74
CLCN6-202ENST00000346436 FIGLAQ6QHK4 219 aa10.4□□□□□ -0.74
CLCN6-202ENST00000346436 ESX1Q8N693 406 aa10.4□□□□□ -0.74
CLCN6-202ENST00000346436 ZPBPQ9BS86 351 aa10.4□□□□□ -0.74
CLCN6-202ENST00000346436 CD244Q9BZW8 370 aa10.4□□□□□ -0.74
CLCN6-202ENST00000346436 CENPMQ9NSP4 180 aa10.4□□□□□ -0.74
CLCN6-202ENST00000346436 TUBA8Q9NY65 449 aaPredicted RBP10.4□□□□□ -0.74
CLCN6-202ENST00000346436 CCDC182A6NF36 153 aa10.4□□□□□ -0.74
CLCN6-202ENST00000346436 ZXDBP98169 803 aa10.4□□□□□ -0.74
CLCN6-202ENST00000346436 ZNF829Q3KNS6 432 aaPredicted RBP10.4□□□□□ -0.74
CLCN6-202ENST00000346436 KCTD11Q693B1 232 aa10.4□□□□□ -0.74
CLCN6-202ENST00000346436 LETMD1Q6P1Q0 360 aa10.4□□□□□ -0.74
CLCN6-202ENST00000346436 LANCL3Q6ZV70 420 aa10.4□□□□□ -0.74
CLCN6-202ENST00000346436 RETREG3Q86VR2 466 aa10.4□□□□□ -0.74
CLCN6-202ENST00000346436 SLC22A16Q86VW1 577 aa10.4□□□□□ -0.74
CLCN6-202ENST00000346436 RHEBL1Q8TAI7 183 aa10.4□□□□□ -0.74
CLCN6-202ENST00000346436 RLN3Q8WXF3 142 aa10.4□□□□□ -0.74
CLCN6-202ENST00000346436 ELSPBP1Q96BH3 223 aa10.4□□□□□ -0.74
CLCN6-202ENST00000346436 ARMC5Q96C12 935 aa10.4□□□□□ -0.74
CLCN6-202ENST00000346436 L3HYPDHQ96EM0 354 aa10.4□□□□□ -0.74
CLCN6-202ENST00000346436 MALT1Q9UDY8 824 aa10.4□□□□□ -0.74
CLCN6-202ENST00000346436 SSR3Q9UNL2 185 aa10.4□□□□□ -0.74
CLCN6-202ENST00000346436 CEPT1Q9Y6K0 416 aa10.4□□□□□ -0.74
CLCN6-202ENST00000346436 PRSS51A0A1B0GVH4 220 aa10.4□□□□□ -0.74
CLCN6-202ENST00000346436 EEDO75530 441 aaKnown RBP10.4□□□□□ -0.74
CLCN6-202ENST00000346436 MTRF1O75570 445 aaKnown RBP10.4□□□□□ -0.74
CLCN6-202ENST00000346436 PRKAR1AP10644 381 aa10.4□□□□□ -0.74
CLCN6-202ENST00000346436 DCKP27707 260 aa10.4□□□□□ -0.74
CLCN6-202ENST00000346436 P2RY2P41231 377 aa10.4□□□□□ -0.74
CLCN6-202ENST00000346436 SLC15A1P46059 708 aa10.4□□□□□ -0.74
CLCN6-202ENST00000346436 RBBP4Q09028 425 aa10.4□□□□□ -0.74
CLCN6-202ENST00000346436 FAM78AQ5JUQ0 283 aa10.4□□□□□ -0.74
CLCN6-202ENST00000346436 LARP4Q71RC2 724 aaKnown RBP eCLIP10.4□□□□□ -0.74
CLCN6-202ENST00000346436 UBQLNLQ8IYU4 475 aa10.4□□□□□ -0.74
CLCN6-202ENST00000346436 OR10G2Q8NGC3 310 aa10.4□□□□□ -0.74
CLCN6-202ENST00000346436 OR52E4Q8NGH9 312 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms