RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 OSGIN1Q9UJX0 560 aa14.64□□□□□ -0.07
UPF3B-202ENST00000345865 DUSP12Q9UNI6 340 aa14.64□□□□□ -0.07
UPF3B-202ENST00000345865 CEACAM5P06731 702 aa14.63□□□□□ -0.07
UPF3B-202ENST00000345865 OCM2P0CE71 109 aa14.63□□□□□ -0.07
UPF3B-202ENST00000345865 OCMP0CE72 109 aaPredicted RBP14.63□□□□□ -0.07
UPF3B-202ENST00000345865 ADORA3P0DMS8 318 aa14.63□□□□□ -0.07
UPF3B-202ENST00000345865 OR12D1P0DN82 309 aa14.63□□□□□ -0.07
UPF3B-202ENST00000345865 GADD45AP24522 165 aa14.63□□□□□ -0.07
UPF3B-202ENST00000345865 CNR2P34972 360 aa14.63□□□□□ -0.07
UPF3B-202ENST00000345865 BCL6P41182 706 aa14.63□□□□□ -0.07
UPF3B-202ENST00000345865 HYAL2Q12891 473 aa14.63□□□□□ -0.07
UPF3B-202ENST00000345865 SOWAHCQ53LP3 525 aaPredicted RBP14.63□□□□□ -0.07
UPF3B-202ENST00000345865 COLEC12Q5KU26 742 aa14.63□□□□□ -0.07
UPF3B-202ENST00000345865 C9orf50Q5SZB4 431 aa14.63□□□□□ -0.07
UPF3B-202ENST00000345865 NDUFAF5Q5TEU4 345 aa14.63□□□□□ -0.07
UPF3B-202ENST00000345865 KIAA1211LQ6NV74 962 aa14.63□□□□□ -0.07
UPF3B-202ENST00000345865 B3GNT7Q8NFL0 401 aa14.63□□□□□ -0.07
UPF3B-202ENST00000345865 OR6Q1Q8NGQ2 317 aa14.63□□□□□ -0.07
UPF3B-202ENST00000345865 PSMA8Q8TAA3 256 aa14.63□□□□□ -0.07
UPF3B-202ENST00000345865 VANGL1Q8TAA9 524 aaPredicted RBP14.63□□□□□ -0.07
UPF3B-202ENST00000345865 ZBED6CLQ96FA7 236 aaPredicted RBP14.63□□□□□ -0.07
UPF3B-202ENST00000345865 QRFPRQ96P65 431 aa14.63□□□□□ -0.07
UPF3B-202ENST00000345865 RPP25Q9BUL9 199 aaKnown RBP14.63□□□□□ -0.07
UPF3B-202ENST00000345865 SLC6A17Q9H1V8 727 aa14.63□□□□□ -0.07
UPF3B-202ENST00000345865 HMG20AQ9NP66 347 aa14.63□□□□□ -0.07
UPF3B-202ENST00000345865 FBXO8Q9NRD0 319 aa14.63□□□□□ -0.07
UPF3B-202ENST00000345865 IMPAD1Q9NX62 359 aa14.63□□□□□ -0.07
UPF3B-202ENST00000345865 DSPPQ9NZW4 1301 aa14.63□□□□□ -0.07
UPF3B-202ENST00000345865 ARRDC5A6NEK1 342 aa14.63□□□□□ -0.07
UPF3B-202ENST00000345865 KCNJ5P48544 419 aa14.63□□□□□ -0.07
UPF3B-202ENST00000345865 RAB28P51157 221 aa14.63□□□□□ -0.07
UPF3B-202ENST00000345865 CRISP1P54107 249 aa14.63□□□□□ -0.07
UPF3B-202ENST00000345865 WDR53Q7Z5U6 358 aaPredicted RBP14.63□□□□□ -0.07
UPF3B-202ENST00000345865 TAGAPQ8N103 731 aa14.63□□□□□ -0.07
UPF3B-202ENST00000345865 DEPDC4Q8N2C3 294 aa14.63□□□□□ -0.07
UPF3B-202ENST00000345865 ZNF675Q8TD23 568 aa14.63□□□□□ -0.07
UPF3B-202ENST00000345865 FCGR1BQ92637 280 aa14.63□□□□□ -0.07
UPF3B-202ENST00000345865 AMDHD1Q96NU7 426 aa14.63□□□□□ -0.07
UPF3B-202ENST00000345865 TREX2Q9BQ50 279 aaPredicted RBP14.63□□□□□ -0.07
UPF3B-202ENST00000345865 PITHD1Q9GZP4 211 aaPredicted RBP14.63□□□□□ -0.07
UPF3B-202ENST00000345865 MKRN2Q9H000 416 aaKnown RBP14.63□□□□□ -0.07
UPF3B-202ENST00000345865 BTBD1Q9H0C5 482 aa14.63□□□□□ -0.07
UPF3B-202ENST00000345865 IGFLR1Q9H665 355 aa14.63□□□□□ -0.07
UPF3B-202ENST00000345865 DNAAF2Q9NVR5 837 aaKnown RBP14.63□□□□□ -0.07
UPF3B-202ENST00000345865 REV1Q9UBZ9 1251 aa14.63□□□□□ -0.07
UPF3B-202ENST00000345865 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.63□□□□□ -0.07
UPF3B-202ENST00000345865 A0A1W2PS29 197 aa14.62□□□□□ -0.07
UPF3B-202ENST00000345865 PRR19A6NJB7 356 aa14.62□□□□□ -0.07
UPF3B-202ENST00000345865 SH3BP5O60239 455 aa14.62□□□□□ -0.07
UPF3B-202ENST00000345865 CLEC3AO75596 197 aa14.62□□□□□ -0.07
UPF3B-202ENST00000345865 C5AR1P21730 350 aa14.62□□□□□ -0.07
UPF3B-202ENST00000345865 ELAVL4P26378 380 aaKnown RBP14.62□□□□□ -0.07
UPF3B-202ENST00000345865 POU1F1P28069 291 aa14.62□□□□□ -0.07
UPF3B-202ENST00000345865 SERPINB1P30740 379 aa14.62□□□□□ -0.07
UPF3B-202ENST00000345865 SSR2P43308 183 aa14.62□□□□□ -0.07
UPF3B-202ENST00000345865 ERVK-21P61565 698 aa14.62□□□□□ -0.07
UPF3B-202ENST00000345865 TEKQ02763 1124 aa14.62□□□□□ -0.07
UPF3B-202ENST00000345865 DUSP2Q05923 314 aa14.62□□□□□ -0.07
UPF3B-202ENST00000345865 IRF3Q14653 427 aa14.62□□□□□ -0.07
UPF3B-202ENST00000345865 RGS21Q2M5E4 152 aa14.62□□□□□ -0.07
UPF3B-202ENST00000345865 ZNF750Q32MQ0 723 aa14.62□□□□□ -0.07
UPF3B-202ENST00000345865 HMGN2P46Q86SG4 172 aa14.62□□□□□ -0.07
UPF3B-202ENST00000345865 ZNF554Q86TJ5 538 aa14.62□□□□□ -0.07
UPF3B-202ENST00000345865 ADCK1Q86TW2 530 aa14.62□□□□□ -0.07
UPF3B-202ENST00000345865 FBXL6Q8N531 539 aa14.62□□□□□ -0.07
UPF3B-202ENST00000345865 NATD1Q8N6N6 113 aa14.62□□□□□ -0.07
UPF3B-202ENST00000345865 ZNF513Q8N8E2 541 aaPredicted RBP14.62□□□□□ -0.07
UPF3B-202ENST00000345865 ZHX1-C8orf76Q96EF9 292 aa14.62□□□□□ -0.07
UPF3B-202ENST00000345865 COL21A1Q96P44 957 aa14.62□□□□□ -0.07
UPF3B-202ENST00000345865 OR51I1Q9H343 314 aa14.62□□□□□ -0.07
UPF3B-202ENST00000345865 RNF167Q9H6Y7 350 aa14.62□□□□□ -0.07
UPF3B-202ENST00000345865 SLC6A20Q9NP91 592 aa14.62□□□□□ -0.07
UPF3B-202ENST00000345865 FZD3Q9NPG1 666 aa14.62□□□□□ -0.07
UPF3B-202ENST00000345865 ACSS1Q9NUB1 689 aaPredicted RBP14.62□□□□□ -0.07
UPF3B-202ENST00000345865 TAS2R7Q9NYW3 318 aa14.62□□□□□ -0.07
UPF3B-202ENST00000345865 ADAM29Q9UKF5 820 aa14.62□□□□□ -0.07
UPF3B-202ENST00000345865 DOLKQ9UPQ8 538 aa14.62□□□□□ -0.07
UPF3B-202ENST00000345865 PGRMC2O15173 223 aa14.61□□□□□ -0.07
UPF3B-202ENST00000345865 AIREO43918 545 aa14.61□□□□□ -0.07
UPF3B-202ENST00000345865 CBFA2T3O75081 653 aa14.61□□□□□ -0.07
UPF3B-202ENST00000345865 HNRNPCP07910 306 aaKnown RBP eCLIP14.61□□□□□ -0.07
UPF3B-202ENST00000345865 ALPPL2P10696 532 aa14.61□□□□□ -0.07
UPF3B-202ENST00000345865 PKLRP30613 574 aa14.61□□□□□ -0.07
UPF3B-202ENST00000345865 FEN1P39748 380 aaKnown RBP14.61□□□□□ -0.07
UPF3B-202ENST00000345865 SEC13P55735 322 aa14.61□□□□□ -0.07
UPF3B-202ENST00000345865 GPR19Q15760 415 aa14.61□□□□□ -0.07
UPF3B-202ENST00000345865 LINC00299Q6ZSB3 139 aa14.61□□□□□ -0.07
UPF3B-202ENST00000345865 SLC46A3Q7Z3Q1 461 aa14.61□□□□□ -0.07
UPF3B-202ENST00000345865 SZRD1Q7Z422 152 aa14.61□□□□□ -0.07
UPF3B-202ENST00000345865 STX19Q8N4C7 294 aa14.61□□□□□ -0.07
UPF3B-202ENST00000345865 OR52E1Q8NGJ3 308 aa14.61□□□□□ -0.07
UPF3B-202ENST00000345865 ZNF764Q96H86 408 aaPredicted RBP14.61□□□□□ -0.07
UPF3B-202ENST00000345865 ZNF354BQ96LW1 612 aa14.61□□□□□ -0.07
UPF3B-202ENST00000345865 MAPKAP1Q9BPZ7 522 aa14.61□□□□□ -0.07
UPF3B-202ENST00000345865 DCSTAMPQ9H295 470 aa14.61□□□□□ -0.07
UPF3B-202ENST00000345865 KCNK12Q9HB15 430 aa14.61□□□□□ -0.07
UPF3B-202ENST00000345865 YBX2Q9Y2T7 364 aaKnown RBP14.61□□□□□ -0.07
UPF3B-202ENST00000345865 FUOMA2VDF0 154 aa14.61□□□□□ -0.07
UPF3B-202ENST00000345865 GPR89AB7ZAQ6 455 aa14.61□□□□□ -0.07
UPF3B-202ENST00000345865 HAT1O14929 419 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms