RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 KANSL1Q7Z3B3 1105 aa17.65■□□□□ 0.42
SMPD1-201ENST00000342245 UBTD2Q8WUN7 234 aa17.65■□□□□ 0.42
SMPD1-201ENST00000342245 ASB12Q8WXK4 309 aa17.65■□□□□ 0.42
SMPD1-201ENST00000342245 FCRL1Q96LA6 429 aa17.65■□□□□ 0.42
SMPD1-201ENST00000342245 C7orf50Q9BRJ6 194 aaKnown RBP17.65■□□□□ 0.42
SMPD1-201ENST00000342245 SYT17Q9BSW7 474 aa17.65■□□□□ 0.42
SMPD1-201ENST00000342245 DPH7Q9BTV6 452 aa17.65■□□□□ 0.42
SMPD1-201ENST00000342245 GPR63Q9BZJ6 419 aa17.65■□□□□ 0.42
SMPD1-201ENST00000342245 CHST8Q9H2A9 424 aa17.65■□□□□ 0.42
SMPD1-201ENST00000342245 TPT1P8Q9HAU6 139 aa17.65■□□□□ 0.42
SMPD1-201ENST00000342245 PIM2Q9P1W9 311 aa17.65■□□□□ 0.42
SMPD1-201ENST00000342245 EXTL2Q9UBQ6 330 aa17.65■□□□□ 0.42
SMPD1-201ENST00000342245 ING1Q9UK53 422 aaPredicted RBP17.65■□□□□ 0.42
SMPD1-201ENST00000342245 TMEM129A0AVI4 362 aa17.65■□□□□ 0.42
SMPD1-201ENST00000342245 TMEM229AB2RXF0 380 aa17.65■□□□□ 0.42
SMPD1-201ENST00000342245 NPIPB8E9PQR5 432 aa17.65■□□□□ 0.42
SMPD1-201ENST00000342245 SYN3O14994 580 aa17.65■□□□□ 0.42
SMPD1-201ENST00000342245 SOD1P00441 154 aa17.65■□□□□ 0.42
SMPD1-201ENST00000342245 ADAP00813 363 aa17.65■□□□□ 0.42
SMPD1-201ENST00000342245 OSMP13725 252 aa17.65■□□□□ 0.42
SMPD1-201ENST00000342245 RHCEP18577 417 aa17.65■□□□□ 0.42
SMPD1-201ENST00000342245 BTCP35070 178 aa17.65■□□□□ 0.42
SMPD1-201ENST00000342245 RORAP35398 523 aa17.65■□□□□ 0.42
SMPD1-201ENST00000342245 RPS25P62851 125 aaKnown RBP17.65■□□□□ 0.42
SMPD1-201ENST00000342245 ILKQ13418 452 aa17.65■□□□□ 0.42
SMPD1-201ENST00000342245 MPEG1Q2M385 716 aa17.65■□□□□ 0.42
SMPD1-201ENST00000342245 C18orf21Q32NC0 220 aaPredicted RBP17.65■□□□□ 0.42
SMPD1-201ENST00000342245 SLC27A4Q6P1M0 643 aa17.65■□□□□ 0.42
SMPD1-201ENST00000342245 C17orf107Q6ZR85 190 aa17.65■□□□□ 0.42
SMPD1-201ENST00000342245 LRRC28Q86X40 367 aaPredicted RBP17.65■□□□□ 0.42
SMPD1-201ENST00000342245 CCDC36Q8IYA8 594 aa17.65■□□□□ 0.42
SMPD1-201ENST00000342245 CSGALNACT1Q8TDX6 532 aa17.65■□□□□ 0.42
SMPD1-201ENST00000342245 CRTAC1Q9NQ79 661 aa17.65■□□□□ 0.42
SMPD1-201ENST00000342245 ACER3Q9NUN7 267 aa17.65■□□□□ 0.42
SMPD1-201ENST00000342245 DNAJC27Q9NZQ0 273 aa17.65■□□□□ 0.42
SMPD1-201ENST00000342245 FZD4Q9ULV1 537 aa17.65■□□□□ 0.42
SMPD1-201ENST00000342245 SPATA2Q9UM82 520 aa17.65■□□□□ 0.42
SMPD1-201ENST00000342245 ALPK3Q96L96 1907 aa17.65■□□□□ 0.42
SMPD1-201ENST00000342245 A0A0B4J203 849 aa17.64■□□□□ 0.42
SMPD1-201ENST00000342245 MOXD2PA6NHM9 499 aa17.64■□□□□ 0.42
SMPD1-201ENST00000342245 NFKBIEO00221 500 aa17.64■□□□□ 0.42
SMPD1-201ENST00000342245 SSNA1O43805 119 aa17.64■□□□□ 0.42
SMPD1-201ENST00000342245 SSX5O60225 188 aa17.64■□□□□ 0.42
SMPD1-201ENST00000342245 GADD45GO95257 159 aa17.64■□□□□ 0.42
SMPD1-201ENST00000342245 SDC1P18827 310 aa17.64■□□□□ 0.42
SMPD1-201ENST00000342245 RBMS1P29558 406 aaKnown RBP17.64■□□□□ 0.42
SMPD1-201ENST00000342245 PBX3P40426 434 aa17.64■□□□□ 0.42
SMPD1-201ENST00000342245 RFX3P48380 749 aa17.64■□□□□ 0.42
SMPD1-201ENST00000342245 AFF1P51825 1210 aaKnown RBP17.64■□□□□ 0.42
SMPD1-201ENST00000342245 VSX2P58304 361 aaPredicted RBP17.64■□□□□ 0.42
SMPD1-201ENST00000342245 TSPAN5P62079 268 aa17.64■□□□□ 0.42
SMPD1-201ENST00000342245 SP140Q13342 867 aa17.64■□□□□ 0.42
SMPD1-201ENST00000342245 IHHQ14623 411 aa17.64■□□□□ 0.42
SMPD1-201ENST00000342245 CTSL3PQ5NE16 218 aa17.64■□□□□ 0.42
SMPD1-201ENST00000342245 ATAT1Q5SQI0 421 aa17.64■□□□□ 0.42
SMPD1-201ENST00000342245 C12orf73Q69YU5 71 aa17.64■□□□□ 0.42
SMPD1-201ENST00000342245 FIP1L1Q6UN15 594 aaKnown RBP17.64■□□□□ 0.42
SMPD1-201ENST00000342245 PRICKLE2Q7Z3G6 844 aa17.64■□□□□ 0.42
SMPD1-201ENST00000342245 NAXDQ8IW45 347 aa17.64■□□□□ 0.42
SMPD1-201ENST00000342245 MOSPD2Q8NHP6 518 aa17.64■□□□□ 0.42
SMPD1-201ENST00000342245 CXorf58Q96LI9 332 aa17.64■□□□□ 0.42
SMPD1-201ENST00000342245 SPATA33Q96N06 139 aa17.64■□□□□ 0.42
SMPD1-201ENST00000342245 ACPTQ9BZG2 426 aa17.64■□□□□ 0.42
SMPD1-201ENST00000342245 POLR1EQ9GZS1 481 aaKnown RBP17.64■□□□□ 0.42
SMPD1-201ENST00000342245 ABCC13Q9NSE7 274 aa17.64■□□□□ 0.42
SMPD1-201ENST00000342245 PLCL2Q9UPR0 1127 aa17.64■□□□□ 0.42
SMPD1-201ENST00000342245 OARD1Q9Y530 152 aa17.64■□□□□ 0.42
SMPD1-201ENST00000342245 PCDHGA9Q9Y5G4 932 aaKnown RBP17.64■□□□□ 0.42
SMPD1-201ENST00000342245 ANKDD1BA6NHY2 528 aa17.64■□□□□ 0.41
SMPD1-201ENST00000342245 LINC00587B1AMM8 73 aa17.64■□□□□ 0.41
SMPD1-201ENST00000342245 GATCO43716 136 aaKnown RBP17.64■□□□□ 0.41
SMPD1-201ENST00000342245 IFNA4P05014 189 aa17.64■□□□□ 0.41
SMPD1-201ENST00000342245 PRSS56P0CW18 603 aa17.64■□□□□ 0.41
SMPD1-201ENST00000342245 HEPACAMQ14CZ8 416 aa17.64■□□□□ 0.41
SMPD1-201ENST00000342245 GSG1Q2KHT4 349 aa17.64■□□□□ 0.41
SMPD1-201ENST00000342245 SLC25A30Q5SVS4 291 aa17.64■□□□□ 0.41
SMPD1-201ENST00000342245 RAET1GQ6H3X3 334 aa17.64■□□□□ 0.41
SMPD1-201ENST00000342245 STPG2Q8N412 459 aa17.64■□□□□ 0.41
SMPD1-201ENST00000342245 OR8J2Q8NGG1 315 aa17.64■□□□□ 0.41
SMPD1-201ENST00000342245 GEMIN6Q8WXD5 167 aaKnown RBP17.64■□□□□ 0.41
SMPD1-201ENST00000342245 C10orf90Q96M02 699 aa17.64■□□□□ 0.41
SMPD1-201ENST00000342245 PKMYT1Q99640 499 aa17.64■□□□□ 0.41
SMPD1-201ENST00000342245 GAREM1Q9H706 876 aa17.64■□□□□ 0.41
SMPD1-201ENST00000342245 ENAMQ9NRM1 1142 aa17.64■□□□□ 0.41
SMPD1-201ENST00000342245 CTSFQ9UBX1 484 aa17.64■□□□□ 0.41
SMPD1-201ENST00000342245 DHRS7Q9Y394 339 aa17.64■□□□□ 0.41
SMPD1-201ENST00000342245 TAPBPO15533 448 aa17.63■□□□□ 0.41
SMPD1-201ENST00000342245 HRGP04196 525 aa17.63■□□□□ 0.41
SMPD1-201ENST00000342245 POU2F1P14859 743 aa17.63■□□□□ 0.41
SMPD1-201ENST00000342245 EPB42P16452 691 aa17.63■□□□□ 0.41
SMPD1-201ENST00000342245 GPR17Q13304 367 aa17.63■□□□□ 0.41
SMPD1-201ENST00000342245 ZRANB3Q5FWF4 1079 aa17.63■□□□□ 0.41
SMPD1-201ENST00000342245 ASB18Q6ZVZ8 466 aa17.63■□□□□ 0.41
SMPD1-201ENST00000342245 CDC26Q8NHZ8 85 aa17.63■□□□□ 0.41
SMPD1-201ENST00000342245 TEX47Q8TBZ9 253 aa17.63■□□□□ 0.41
SMPD1-201ENST00000342245 HIST1H2AHQ96KK5 128 aa17.63■□□□□ 0.41
SMPD1-201ENST00000342245 KLHL5Q96PQ7 755 aa17.63■□□□□ 0.41
SMPD1-201ENST00000342245 OR4K3Q96R72 315 aa17.63■□□□□ 0.41
SMPD1-201ENST00000342245 CYSLTR2Q9NS75 346 aa17.63■□□□□ 0.41
SMPD1-201ENST00000342245 ZNF624Q9P2J8 865 aaPredicted RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms