RNA–Protein interactions for RNA: ENST00000341423.9

HMGB1-203, Transcript of high mobility group box 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB1, Length 5,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-203ENST00000341423 AK1P00568 194 aa7.99□□□□□ -1.13
HMGB1-203ENST00000341423 C1QTNF9P0C862 333 aa7.99□□□□□ -1.13
HMGB1-203ENST00000341423 GSTM2P28161 218 aa7.99□□□□□ -1.13
HMGB1-203ENST00000341423 GABRA3P34903 492 aa7.99□□□□□ -1.13
HMGB1-203ENST00000341423 ASPAP45381 313 aa7.99□□□□□ -1.13
HMGB1-203ENST00000341423 GPR18Q14330 331 aa7.99□□□□□ -1.13
HMGB1-203ENST00000341423 WSCD2Q2TBF2 565 aa7.99□□□□□ -1.13
HMGB1-203ENST00000341423 SPESP1Q6UW49 350 aa7.99□□□□□ -1.13
HMGB1-203ENST00000341423 Q6ZTK2 550 aa7.99□□□□□ -1.13
HMGB1-203ENST00000341423 ARHGAP12Q8IWW6 846 aa7.99□□□□□ -1.13
HMGB1-203ENST00000341423 OR4N5Q8IXE1 308 aa7.99□□□□□ -1.13
HMGB1-203ENST00000341423 JOSD2Q8TAC2 188 aa7.99□□□□□ -1.13
HMGB1-203ENST00000341423 CT55Q8WUE5 264 aa7.99□□□□□ -1.13
HMGB1-203ENST00000341423 MTERF1Q99551 399 aaKnown RBP7.99□□□□□ -1.13
HMGB1-203ENST00000341423 ETNK1Q9HBU6 452 aa7.99□□□□□ -1.13
HMGB1-203ENST00000341423 FBXL4Q9UKA2 621 aa7.99□□□□□ -1.13
HMGB1-203ENST00000341423 PILRBQ9UKJ0 227 aa7.99□□□□□ -1.13
HMGB1-203ENST00000341423 OR5H15A6NDH6 313 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 CHRM1P11229 460 aaPredicted RBP7.98□□□□□ -1.13
HMGB1-203ENST00000341423 FASLGP48023 281 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 CASP5P51878 434 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 SLC26A5P58743 744 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 CUL3Q13618 768 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 CCDC153Q494R4 210 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 SPIN3Q5JUX0 258 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 FCRLBQ6BAA4 426 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 C3P1Q6ZMU1 363 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 CDH24Q86UP0 819 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 GPALPP1Q8IXQ4 340 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 SLC38A4Q969I6 547 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 ZNF707Q96C28 371 aaPredicted RBP7.98□□□□□ -1.13
HMGB1-203ENST00000341423 ZNF419Q96HQ0 510 aaPredicted RBP7.98□□□□□ -1.13
HMGB1-203ENST00000341423 CDKN2AIPNLQ96HQ2 116 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 FCRL5Q96RD9 977 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 FAM173AQ9BQD7 235 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 NARFLQ9H6Q4 476 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 HEY2Q9UBP5 337 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 OR5V1Q9UGF6 321 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 TCAF1Q9Y4C2 921 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 SMIM31A0A1B0GVY4 71 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 A0A1W2PQJ5 194 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 SGK494L7N484 410 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 SAP18O00422 153 aaKnown RBP7.98□□□□□ -1.13
HMGB1-203ENST00000341423 LRRTM2O43300 516 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 PF4V1P10720 104 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 ATP6V1B1P15313 513 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 PSMA4P25789 261 aaKnown RBP7.98□□□□□ -1.13
HMGB1-203ENST00000341423 OPRD1P41143 372 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 CTSKP43235 329 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 MTNR1AP48039 350 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 EPS8Q12929 822 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 QPCTQ16769 361 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 STT3BQ8TCJ2 826 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 CLEC4CQ8WTT0 213 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 KATNB1Q9BVA0 655 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 FOLH1BQ9HBA9 442 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 TAS2R10Q9NYW0 307 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 KCNIP1Q9NZI2 227 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 LRCH1Q9Y2L9 728 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 FAM208BQ5VWN6 2430 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 B4E171 279 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 SLC43A1O75387 559 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 DHRS4L1P0CG22 281 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 MYL12AP19105 171 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 MMP8P22894 467 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 TSPAN7P41732 249 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 NRG1Q02297 640 aaPredicted RBP7.98□□□□□ -1.13
HMGB1-203ENST00000341423 CHRFAM7AQ494W8 412 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 C5orf22Q49AR2 442 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 STEAP3Q658P3 488 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 FAHD2BQ6P2I3 314 aaPredicted RBP7.98□□□□□ -1.13
HMGB1-203ENST00000341423 SLC35F3Q8IY50 421 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 POC5Q8NA72 575 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 UTP15Q8TED0 518 aaKnown RBP7.98□□□□□ -1.13
HMGB1-203ENST00000341423 TANKQ92844 425 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 INTS12Q96CB8 462 aaKnown RBP7.98□□□□□ -1.13
HMGB1-203ENST00000341423 FAHD2AQ96GK7 314 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 WARS2Q9UGM6 360 aaKnown RBP7.98□□□□□ -1.13
HMGB1-203ENST00000341423 DBIP07108 87 aaKnown RBP7.98□□□□□ -1.13
HMGB1-203ENST00000341423 COILP38432 576 aaPredicted RBP7.98□□□□□ -1.13
HMGB1-203ENST00000341423 SOX8P57073 446 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 PRPS1P60891 318 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 INPP5JQ15735 1006 aaPredicted RBP7.98□□□□□ -1.13
HMGB1-203ENST00000341423 PRAMEF8Q5VWM4 474 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 PRAMEF7Q5VXH5 474 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 LRRC70Q7Z2Q7 622 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 SLC41A1Q8IVJ1 513 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 ZNF595Q8IYB9 648 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 DAW1Q8N136 415 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 LRRC25Q8N386 305 aaPredicted RBP7.98□□□□□ -1.13
HMGB1-203ENST00000341423 CLDN19Q8N6F1 224 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 MS4A14Q96JA4 679 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 FAM234AQ9H0X4 552 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 STARD5Q9NSY2 213 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 V9GYQ6 96 aa7.98□□□□□ -1.13
HMGB1-203ENST00000341423 EFSO43281 561 aa7.97□□□□□ -1.13
HMGB1-203ENST00000341423 SLCO2B1O94956 709 aa7.97□□□□□ -1.13
HMGB1-203ENST00000341423 SEMA3DO95025 777 aa7.97□□□□□ -1.13
HMGB1-203ENST00000341423 MATN1P21941 496 aa7.97□□□□□ -1.13
HMGB1-203ENST00000341423 NAA10P41227 235 aaPredicted RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms