RNA–Protein interactions for RNA: ENST00000340473.7

GTF2F2-201, Transcript of general transcription factor IIF subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F2, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F2-201ENST00000340473 C16orf89Q6UX73 402 aa12.54□□□□□ -0.4
GTF2F2-201ENST00000340473 NATD1Q8N6N6 113 aa12.54□□□□□ -0.4
GTF2F2-201ENST00000340473 ZBED6CLQ96FA7 236 aaPredicted RBP12.54□□□□□ -0.4
GTF2F2-201ENST00000340473 AMDHD1Q96NU7 426 aa12.54□□□□□ -0.4
GTF2F2-201ENST00000340473 TAAR9Q96RI9 348 aa12.54□□□□□ -0.4
GTF2F2-201ENST00000340473 BBS4Q96RK4 519 aa12.54□□□□□ -0.4
GTF2F2-201ENST00000340473 CGREF1Q99674 301 aa12.54□□□□□ -0.4
GTF2F2-201ENST00000340473 TRIM4Q9C037 500 aa12.54□□□□□ -0.4
GTF2F2-201ENST00000340473 AKIRIN1Q9H9L7 192 aaPredicted RBP12.54□□□□□ -0.4
GTF2F2-201ENST00000340473 ACSS1Q9NUB1 689 aaPredicted RBP12.54□□□□□ -0.4
GTF2F2-201ENST00000340473 CTSFQ9UBX1 484 aa12.54□□□□□ -0.4
GTF2F2-201ENST00000340473 SATB2Q9UPW6 733 aa12.54□□□□□ -0.4
GTF2F2-201ENST00000340473 ENTPD4Q9Y227 616 aa12.54□□□□□ -0.4
GTF2F2-201ENST00000340473 ZNF780BQ9Y6R6 833 aa12.54□□□□□ -0.4
GTF2F2-201ENST00000340473 CNOT1A5YKK6 2376 aaKnown RBP12.54□□□□□ -0.4
GTF2F2-201ENST00000340473 NUP214P35658 2090 aaPredicted RBP12.54□□□□□ -0.4
GTF2F2-201ENST00000340473 MEN1O00255 615 aa12.54□□□□□ -0.4
GTF2F2-201ENST00000340473 ERN1O75460 977 aaKnown RBP12.54□□□□□ -0.4
GTF2F2-201ENST00000340473 NPPAP01160 153 aa12.54□□□□□ -0.4
GTF2F2-201ENST00000340473 C1QCP02747 245 aa12.54□□□□□ -0.4
GTF2F2-201ENST00000340473 NTSP30990 170 aa12.54□□□□□ -0.4
GTF2F2-201ENST00000340473 TRPC1P48995 793 aa12.54□□□□□ -0.4
GTF2F2-201ENST00000340473 NCBP2P52298 156 aaKnown RBP eCLIP12.54□□□□□ -0.48e-8■□□□□ 11.3
GTF2F2-201ENST00000340473 HSPB3Q12988 150 aa12.54□□□□□ -0.4
GTF2F2-201ENST00000340473 GAB1Q13480 694 aa12.54□□□□□ -0.4
GTF2F2-201ENST00000340473 DNAL1Q4LDG9 190 aa12.54□□□□□ -0.4
GTF2F2-201ENST00000340473 VWA2Q5GFL6 755 aa12.54□□□□□ -0.4
GTF2F2-201ENST00000340473 ZC3H7AQ8IWR0 971 aaKnown RBP12.54□□□□□ -0.4
GTF2F2-201ENST00000340473 ZNF595Q8IYB9 648 aa12.54□□□□□ -0.4
GTF2F2-201ENST00000340473 CCDC116Q8IYX3 515 aa12.54□□□□□ -0.4
GTF2F2-201ENST00000340473 GOT1L1Q8NHS2 421 aaPredicted RBP12.54□□□□□ -0.4
GTF2F2-201ENST00000340473 WDR36Q8NI36 951 aaKnown RBP12.54□□□□□ -0.4
GTF2F2-201ENST00000340473 AURKBQ96GD4 344 aaPredicted RBP12.54□□□□□ -0.4
GTF2F2-201ENST00000340473 OR1F2PQ96R84 312 aa12.54□□□□□ -0.4
GTF2F2-201ENST00000340473 GIMAP4Q9NUV9 329 aa12.54□□□□□ -0.4
GTF2F2-201ENST00000340473 NDE1Q9NXR1 346 aa12.54□□□□□ -0.4
GTF2F2-201ENST00000340473 MRPS33Q9Y291 106 aaKnown RBP12.54□□□□□ -0.4
GTF2F2-201ENST00000340473 CLDN16Q9Y5I7 305 aa12.54□□□□□ -0.4
GTF2F2-201ENST00000340473 TEX51A0A1B0GUA7 166 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 GSC2O15499 205 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 BMP10O95393 424 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 ANP32DO95626 131 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 GPR75O95800 540 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 ONECUT2O95948 504 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 CSNK2A2P19784 350 aaPredicted RBP12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 MAOAP21397 527 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 SLC6A2P23975 617 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 KCNJ2P63252 427 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 LRRC74AQ0VAA2 488 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 SLC13A2Q13183 592 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 RSPO4Q2I0M5 234 aaPredicted RBP12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 NANOGP8Q6NSW7 305 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 ZNF621Q6ZSS3 439 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 TMPRSS12Q86WS5 348 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 CLEC4FQ8N1N0 589 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 OR5P2Q8WZ92 322 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 DDA1Q9BW61 102 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 NANOGQ9H9S0 305 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 MKKSQ9NPJ1 570 aaPredicted RBP12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 PRTFDC1Q9NRG1 225 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 DLL3Q9NYJ7 618 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 TAS2R9Q9NYW1 312 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 BLACEA4D250 179 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 VGLL3A8MV65 326 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 C9orf172C9J069 976 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 CLDN4O14493 209 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 CTNSO60931 367 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 CPMP14384 443 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 CDK9P50750 372 aaKnown RBP12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 EFNA3P52797 238 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 FOXL2P58012 376 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 SELPLGQ14242 412 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 MLC1Q15049 377 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 RABL3Q5HYI8 236 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 MED25Q71SY5 747 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 SCUBE1Q8IWY4 988 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 PRSS58Q8IYP2 241 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 CACTIN-AS1Q8N1I8 211 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 LRRC25Q8N386 305 aaPredicted RBP12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 OR9A2Q8NGT5 310 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 DNAJB8Q8NHS0 232 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 CLPTM1LQ96KA5 538 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 ANKRD27Q96NW4 1050 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 PHF12Q96QT6 1004 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 CDRT15Q96T59 188 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 HOPXQ9BPY8 73 aaPredicted RBP12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 ZPBPQ9BS86 351 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 THTPAQ9BU02 230 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 ASPSCR1Q9BZE9 553 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 IKZF5Q9H5V7 419 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 CXorf36Q9H7Y0 433 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 SIRT3Q9NTG7 399 aaPredicted RBP12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 ZNF282Q9UDV7 671 aaPredicted RBP12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 PACSIN3Q9UKS6 424 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 PCDHGB4Q9UN71 923 aa12.53□□□□□ -0.4
GTF2F2-201ENST00000340473 NUP210LQ5VU65 1888 aa12.52□□□□□ -0.4
GTF2F2-201ENST00000340473 CFAP73A6NFT4 308 aa12.52□□□□□ -0.41
GTF2F2-201ENST00000340473 NVLO15381 856 aaKnown RBP12.52□□□□□ -0.41
GTF2F2-201ENST00000340473 PORP16435 677 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms