RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 CCDC190Q86UF4 302 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 LHFPL3Q86UP9 236 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 IQCHQ86VS3 1027 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 ATCAYQ86WG3 371 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 MMAAQ8IVH4 418 aaKnown RBP13.69□□□□□ -0.22
CPSF7-201ENST00000340437 OR5AR1Q8NGP9 310 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 SLC9A6Q92581 669 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 NACC2Q96BF6 587 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 PRAP1Q96NZ9 151 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 KLK4Q9Y5K2 254 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 CCDC182A6NF36 153 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 UGDHO60701 494 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 POP7O75817 140 aaKnown RBP13.69□□□□□ -0.22
CPSF7-201ENST00000340437 C8orf89P0DMQ9 161 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 IL7P13232 177 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 CBLP22681 906 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 SDC2P34741 201 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 DEFB103AP81534 67 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 HOXC5Q00444 222 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 GINS1Q14691 196 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 TEAD2Q15562 447 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 SNAP47Q5SQN1 464 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 GPR155Q7Z3F1 870 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 C6orf120Q7Z4R8 191 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 LRR1Q96L50 414 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 OR2A14Q96R47 310 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 ZSCAN5AQ9BUG6 496 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 ASAH2Q9NR71 780 aa13.69□□□□□ -0.22
CPSF7-201ENST00000340437 HBQ1P09105 142 aa13.68□□□□□ -0.22
CPSF7-201ENST00000340437 HTR3AP46098 478 aa13.68□□□□□ -0.22
CPSF7-201ENST00000340437 FCHO2Q0JRZ9 810 aa13.68□□□□□ -0.22
CPSF7-201ENST00000340437 EIF4HQ15056 248 aaKnown RBP13.68□□□□□ -0.22
CPSF7-201ENST00000340437 PLPP4Q5VZY2 271 aa13.68□□□□□ -0.22
CPSF7-201ENST00000340437 B3GLCTQ6Y288 498 aa13.68□□□□□ -0.22
CPSF7-201ENST00000340437 CCDC80Q76M96 950 aa13.68□□□□□ -0.22
CPSF7-201ENST00000340437 OR56A3Q8NH54 315 aa13.68□□□□□ -0.22
CPSF7-201ENST00000340437 C9orf43Q8TAL5 461 aaPredicted RBP13.68□□□□□ -0.22
CPSF7-201ENST00000340437 ASB15Q8WXK1 588 aa13.68□□□□□ -0.22
CPSF7-201ENST00000340437 MAGEB10Q96LZ2 347 aaPredicted RBP13.68□□□□□ -0.22
CPSF7-201ENST00000340437 FNDC11Q9BVV2 318 aa13.68□□□□□ -0.22
CPSF7-201ENST00000340437 ANKRA2Q9H9E1 313 aa13.68□□□□□ -0.22
CPSF7-201ENST00000340437 SLAMF7Q9NQ25 335 aa13.68□□□□□ -0.22
CPSF7-201ENST00000340437 MEIOCA2RUB1 952 aa13.68□□□□□ -0.22
CPSF7-201ENST00000340437 ZAR1LA6NP61 321 aa13.68□□□□□ -0.22
CPSF7-201ENST00000340437 EIF3FO00303 357 aaPredicted RBP13.68□□□□□ -0.22
CPSF7-201ENST00000340437 LATO43561 262 aa13.68□□□□□ -0.22
CPSF7-201ENST00000340437 PRKYO43930 277 aa13.68□□□□□ -0.22
CPSF7-201ENST00000340437 UGT2B17O75795 530 aa13.68□□□□□ -0.22
CPSF7-201ENST00000340437 NCR1O76036 304 aa13.68□□□□□ -0.22
CPSF7-201ENST00000340437 INPP1P49441 399 aa13.68□□□□□ -0.22
CPSF7-201ENST00000340437 TAP2Q03519 686 aa13.68□□□□□ -0.22
CPSF7-201ENST00000340437 THOC7Q6I9Y2 204 aaKnown RBP13.68□□□□□ -0.22
CPSF7-201ENST00000340437 VASH1Q7L8A9 365 aaPredicted RBP13.68□□□□□ -0.22
CPSF7-201ENST00000340437 OR4D11Q8NGI4 311 aa13.68□□□□□ -0.22
CPSF7-201ENST00000340437 RC3H2Q9HBD1 1191 aaKnown RBP13.68□□□□□ -0.22
CPSF7-201ENST00000340437 CUEDC1Q9NWM3 386 aaPredicted RBP13.68□□□□□ -0.22
CPSF7-201ENST00000340437 KLHL42Q9P2K6 505 aa13.68□□□□□ -0.22
CPSF7-201ENST00000340437 TSC22D2O75157 780 aa13.68□□□□□ -0.22
CPSF7-201ENST00000340437 ARAFP10398 606 aa13.68□□□□□ -0.22
CPSF7-201ENST00000340437 CSTF2P33240 577 aaKnown RBP eCLIP13.68□□□□□ -0.22
CPSF7-201ENST00000340437 KCNC3Q14003 757 aa13.68□□□□□ -0.22
CPSF7-201ENST00000340437 CRB2Q5IJ48 1285 aa13.68□□□□□ -0.22
CPSF7-201ENST00000340437 ZDHHC20Q5W0Z9 365 aa13.68□□□□□ -0.22
CPSF7-201ENST00000340437 ERAP2Q6P179 960 aa13.68□□□□□ -0.22
CPSF7-201ENST00000340437 METTL3Q86U44 580 aaKnown RBP13.68□□□□□ -0.22
CPSF7-201ENST00000340437 TRIM69Q86WT6 500 aa13.68□□□□□ -0.22
CPSF7-201ENST00000340437 TCEAL8Q8IYN2 117 aa13.68□□□□□ -0.22
CPSF7-201ENST00000340437 TRAM1L1Q8N609 369 aa13.68□□□□□ -0.22
CPSF7-201ENST00000340437 ENKURQ8TC29 256 aa13.68□□□□□ -0.22
CPSF7-201ENST00000340437 DOK4Q8TEW6 326 aa13.68□□□□□ -0.22
CPSF7-201ENST00000340437 VOPP1Q96AW1 172 aa13.68□□□□□ -0.22
CPSF7-201ENST00000340437 FTSJ1Q9UET6 329 aa13.68□□□□□ -0.22
CPSF7-201ENST00000340437 OSMP13725 252 aa13.67□□□□□ -0.22
CPSF7-201ENST00000340437 HSD3B1P14060 373 aa13.67□□□□□ -0.22
CPSF7-201ENST00000340437 HSD3B2P26439 372 aa13.67□□□□□ -0.22
CPSF7-201ENST00000340437 TCTN3Q6NUS6 607 aa13.67□□□□□ -0.22
CPSF7-201ENST00000340437 NXPE4Q6UWF7 544 aa13.67□□□□□ -0.22
CPSF7-201ENST00000340437 GPR32P1Q8NGA4 272 aa13.67□□□□□ -0.22
CPSF7-201ENST00000340437 OR9A1PQ8NGU1 263 aa13.67□□□□□ -0.22
CPSF7-201ENST00000340437 SLC7A13Q8TCU3 470 aa13.67□□□□□ -0.22
CPSF7-201ENST00000340437 TMCO6Q96DC7 493 aa13.67□□□□□ -0.22
CPSF7-201ENST00000340437 MTERF3Q96E29 417 aa13.67□□□□□ -0.22
CPSF7-201ENST00000340437 CITED4Q96RK1 184 aa13.67□□□□□ -0.22
CPSF7-201ENST00000340437 OSGEPL1Q9H4B0 414 aa13.67□□□□□ -0.22
CPSF7-201ENST00000340437 ATP6V1HQ9UI12 483 aa13.67□□□□□ -0.22
CPSF7-201ENST00000340437 CMAHPQ9Y471 501 aa13.67□□□□□ -0.22
CPSF7-201ENST00000340437 A0A1B0GVC2 190 aa13.67□□□□□ -0.22
CPSF7-201ENST00000340437 SLC5A10A0PJK1 596 aa13.67□□□□□ -0.22
CPSF7-201ENST00000340437 A6NIN4 97 aa13.67□□□□□ -0.22
CPSF7-201ENST00000340437 NPC1O15118 1278 aa13.67□□□□□ -0.22
CPSF7-201ENST00000340437 CXCL14O95715 111 aa13.67□□□□□ -0.22
CPSF7-201ENST00000340437 RBBP4Q09028 425 aa13.67□□□□□ -0.22
CPSF7-201ENST00000340437 BCL2A1Q16548 175 aa13.67□□□□□ -0.22
CPSF7-201ENST00000340437 HENMT1Q5T8I9 393 aaKnown RBP13.67□□□□□ -0.22
CPSF7-201ENST00000340437 FAM71E1Q6IPT2 247 aa13.67□□□□□ -0.22
CPSF7-201ENST00000340437 LIPIQ6XZB0 460 aa13.67□□□□□ -0.22
CPSF7-201ENST00000340437 NLRP8Q86W28 1048 aa13.67□□□□□ -0.22
CPSF7-201ENST00000340437 OR6F1Q8NGZ6 308 aa13.67□□□□□ -0.22
CPSF7-201ENST00000340437 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.67□□□□□ -0.22
CPSF7-201ENST00000340437 C11orf24Q96F05 449 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms