RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 SMURF2Q9HAU4 748 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 KCNK12Q9HB15 430 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 DMAC2Q9NW81 257 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 PDP1Q9P0J1 537 aaPredicted RBP3.98□□□□□ -1.77
NEDD4-201ENST00000338963 PIM2Q9P1W9 311 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 RPL36Q9Y3U8 105 aaKnown RBP3.98□□□□□ -1.77
NEDD4-201ENST00000338963 CLCA3PQ9Y6N3 262 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 HYKKA2RU49 373 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 URADA6NGE7 173 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 FAM74A7A6NL05 159 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 SEC22BO75396 215 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 PSAPP07602 524 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 OR8G3PP0DMU2 310 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 C1GALT1C1LP0DN25 315 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 CPN1P15169 458 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 ZNF25P17030 456 aaPredicted RBP3.98□□□□□ -1.77
NEDD4-201ENST00000338963 AGAP20933 346 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 RPL10P27635 214 aaKnown RBP3.98□□□□□ -1.77
NEDD4-201ENST00000338963 MSX2P35548 267 aaPredicted RBP3.98□□□□□ -1.77
NEDD4-201ENST00000338963 EN1Q05925 392 aaPredicted RBP3.98□□□□□ -1.77
NEDD4-201ENST00000338963 CCINQ13939 588 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 KYAT1Q16773 422 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 ZNF630Q2M218 657 aaPredicted RBP3.98□□□□□ -1.77
NEDD4-201ENST00000338963 FAM74A3Q4VXF1 159 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 AKIRIN2Q53H80 203 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 GCNT7Q6ZNI0 430 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 TMUB2Q71RG4 321 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 GAREM2Q75VX8 874 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 MON1BQ7L1V2 547 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 SZRD1Q7Z422 152 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 PPP1R3BQ86XI6 285 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 SERPINA12Q8IW75 414 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 GCNT2Q8N0V5 402 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 PRR18Q8N4B5 295 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 ZNF383Q8NA42 475 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 TMEM185AQ8NFB2 350 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 NLGN4YQ8NFZ3 816 aaPredicted RBP3.98□□□□□ -1.77
NEDD4-201ENST00000338963 OR13D1Q8NGV5 346 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 SPPL2BQ8TCT7 592 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 MS4A3Q96HJ5 214 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 TEFMQ96QE5 360 aaKnown RBP3.98□□□□□ -1.77
NEDD4-201ENST00000338963 THUMPD3Q9BV44 507 aaKnown RBP3.98□□□□□ -1.77
NEDD4-201ENST00000338963 PRR14Q9BWN1 585 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 SYT4Q9H2B2 425 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 IKZF4Q9H2S9 585 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 ZNF395Q9H8N7 513 aaPredicted RBP3.98□□□□□ -1.77
NEDD4-201ENST00000338963 ZSCAN32Q9NX65 697 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 MAP10Q9P2G4 905 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 LRP2BPQ9P2M1 347 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 CDH10Q9Y6N8 788 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 A0A1W2PP18 115 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 M0R2N6 131 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 INSIG1O15503 277 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 OR2T1O43869 369 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 AOC2O75106 756 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 SOCS5O75159 536 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 TMEM127O75204 238 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 CALCAP01258 141 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 CRHP06850 196 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 IGFBP1P08833 259 aaPredicted RBP3.97□□□□□ -1.77
NEDD4-201ENST00000338963 ABOP16442 354 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 RBMS1P29558 406 aaKnown RBP3.97□□□□□ -1.77
NEDD4-201ENST00000338963 FMO3P31513 532 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 RBM34P42696 430 aaKnown RBP3.97□□□□□ -1.77
NEDD4-201ENST00000338963 CDKN2BP42772 138 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 GPR3P46089 330 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 GANABQ14697 944 aaKnown RBP3.97□□□□□ -1.77
NEDD4-201ENST00000338963 USP39Q53GS9 565 aaKnown RBP3.97□□□□□ -1.77
NEDD4-201ENST00000338963 SLC22A25Q6T423 547 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 ZNF783Q6ZMS7 281 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 SSX6Q7RTT6 188 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 LRRC28Q86X40 367 aaPredicted RBP3.97□□□□□ -1.77
NEDD4-201ENST00000338963 CIR1Q86X95 450 aaPredicted RBP3.97□□□□□ -1.77
NEDD4-201ENST00000338963 OR2G2Q8NGZ5 317 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 CNIH3Q8TBE1 160 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 PHOSPHO1Q8TCT1 267 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 NEK7Q8TDX7 302 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 PXYLP1Q8TE99 480 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 HMCESQ96FZ2 354 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 MRGPRX4Q96LA9 322 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 SDHCQ99643 169 aaPredicted RBP3.97□□□□□ -1.77
NEDD4-201ENST00000338963 EGFL8Q99944 293 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 DPH1Q9BZG8 443 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 MIEF1Q9NQG6 463 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 ZNF112Q9UJU3 913 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 TBC1D3KA0A087X1G2 549 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 NKRFO15226 690 aaKnown RBP eCLIP3.97□□□□□ -1.77
NEDD4-201ENST00000338963 GATBO75879 557 aaKnown RBP3.97□□□□□ -1.77
NEDD4-201ENST00000338963 F2P00734 622 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 GABRA1P14867 456 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 PFKLP17858 780 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 AGXTP21549 392 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 ARR3P36575 388 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 DIO1P49895 249 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 TARBP2Q15633 366 aaKnown RBP3.97□□□□□ -1.77
NEDD4-201ENST00000338963 ARMC12Q5T9G4 340 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 LCLAT1Q6UWP7 414 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 DLK2Q6UY11 383 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 RANBP3LQ86VV4 465 aaPredicted RBP3.97□□□□□ -1.77
NEDD4-201ENST00000338963 GPR137CQ8N3F9 429 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms