RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 KLHL1Q9NR64 748 aa14.19□□□□□ -0.14
PRKN-201ENST00000338468 OXSMQ9NWU1 459 aa14.19□□□□□ -0.14
PRKN-201ENST00000338468 PLLPQ9Y342 182 aa14.19□□□□□ -0.14
PRKN-201ENST00000338468 TIMM22Q9Y584 194 aa14.19□□□□□ -0.14
PRKN-201ENST00000338468 PCDHGB6Q9Y5F9 930 aa14.19□□□□□ -0.14
PRKN-201ENST00000338468 POLEQ07864 2286 aa14.18□□□□□ -0.14
PRKN-201ENST00000338468 ANKUB1A6NFN9 424 aa14.18□□□□□ -0.14
PRKN-201ENST00000338468 CDK2AP1O14519 115 aa14.18□□□□□ -0.14
PRKN-201ENST00000338468 ZFAND5O76080 213 aa14.18□□□□□ -0.14
PRKN-201ENST00000338468 KRT6AP02538 564 aa14.18□□□□□ -0.14
PRKN-201ENST00000338468 KRT6BP04259 564 aa14.18□□□□□ -0.14
PRKN-201ENST00000338468 IGKV3-11P04433 115 aa14.18□□□□□ -0.14
PRKN-201ENST00000338468 ENO1P06733 434 aaKnown RBP14.18□□□□□ -0.14
PRKN-201ENST00000338468 CPA3P15088 417 aa14.18□□□□□ -0.14
PRKN-201ENST00000338468 TNNI3P19429 210 aa14.18□□□□□ -0.14
PRKN-201ENST00000338468 MST1P26927 711 aa14.18□□□□□ -0.14
PRKN-201ENST00000338468 COL8A1P27658 744 aa14.18□□□□□ -0.14
PRKN-201ENST00000338468 KRT6CP48668 564 aa14.18□□□□□ -0.14
PRKN-201ENST00000338468 HLCSP50747 726 aa14.18□□□□□ -0.14
PRKN-201ENST00000338468 OC90Q02509 493 aaPredicted RBP14.18□□□□□ -0.14
PRKN-201ENST00000338468 PCLAFQ15004 111 aa14.18□□□□□ -0.14
PRKN-201ENST00000338468 CCNYL2Q5T2Q4 361 aa14.18□□□□□ -0.14
PRKN-201ENST00000338468 NDUFAF5Q5TEU4 345 aa14.18□□□□□ -0.14
PRKN-201ENST00000338468 FAM180AQ6UWF9 173 aa14.18□□□□□ -0.14
PRKN-201ENST00000338468 MMP21Q8N119 569 aa14.18□□□□□ -0.14
PRKN-201ENST00000338468 C1orf52Q8N6N3 182 aaKnown RBP14.18□□□□□ -0.14
PRKN-201ENST00000338468 BCORP1Q8N888 145 aa14.18□□□□□ -0.14
PRKN-201ENST00000338468 ST6GALNAC3Q8NDV1 305 aa14.18□□□□□ -0.14
PRKN-201ENST00000338468 SUN3Q8TAQ9 357 aa14.18□□□□□ -0.14
PRKN-201ENST00000338468 PRR7Q8TB68 274 aa14.18□□□□□ -0.14
PRKN-201ENST00000338468 METTL6Q8TCB7 284 aa14.18□□□□□ -0.14
PRKN-201ENST00000338468 DOK4Q8TEW6 326 aa14.18□□□□□ -0.14
PRKN-201ENST00000338468 CHTF18Q8WVB6 975 aa14.18□□□□□ -0.14
PRKN-201ENST00000338468 SREK1Q8WXA9 508 aaKnown RBP14.18□□□□□ -0.14
PRKN-201ENST00000338468 APOPT1Q96IL0 206 aa14.18□□□□□ -0.14
PRKN-201ENST00000338468 DGAT2Q96PD7 388 aa14.18□□□□□ -0.14
PRKN-201ENST00000338468 TMEM109Q9BVC6 243 aa14.18□□□□□ -0.14
PRKN-201ENST00000338468 ROPN1BQ9BZX4 212 aaPredicted RBP14.18□□□□□ -0.14
PRKN-201ENST00000338468 ROPN1Q9HAT0 212 aaPredicted RBP14.18□□□□□ -0.14
PRKN-201ENST00000338468 AHSPQ9NZD4 102 aa14.18□□□□□ -0.14
PRKN-201ENST00000338468 LRFN1Q9P244 771 aa14.18□□□□□ -0.14
PRKN-201ENST00000338468 CES1P1Q9UKY3 287 aa14.18□□□□□ -0.14
PRKN-201ENST00000338468 STK38LQ9Y2H1 464 aa14.18□□□□□ -0.14
PRKN-201ENST00000338468 ARHGAP10A1A4S6 786 aa14.17□□□□□ -0.14
PRKN-201ENST00000338468 ZNF354AO60765 605 aaPredicted RBP14.17□□□□□ -0.14
PRKN-201ENST00000338468 ULK1O75385 1050 aa14.17□□□□□ -0.14
PRKN-201ENST00000338468 ITGA10O75578 1167 aa14.17□□□□□ -0.14
PRKN-201ENST00000338468 RASAL1O95294 804 aa14.17□□□□□ -0.14
PRKN-201ENST00000338468 SP1P08047 785 aa14.17□□□□□ -0.14
PRKN-201ENST00000338468 HSD3B1P14060 373 aa14.17□□□□□ -0.14
PRKN-201ENST00000338468 EDN3P14138 238 aa14.17□□□□□ -0.14
PRKN-201ENST00000338468 ALOX15P16050 662 aaPredicted RBP14.17□□□□□ -0.14
PRKN-201ENST00000338468 CREB1P16220 341 aa14.17□□□□□ -0.14
PRKN-201ENST00000338468 HSD3B2P26439 372 aa14.17□□□□□ -0.14
PRKN-201ENST00000338468 CYB561P49447 251 aa14.17□□□□□ -0.14
PRKN-201ENST00000338468 RAE1P78406 368 aaKnown RBP14.17□□□□□ -0.14
PRKN-201ENST00000338468 IFFO1Q0D2I5 559 aa14.17□□□□□ -0.14
PRKN-201ENST00000338468 CSTF3Q12996 717 aaKnown RBP14.17□□□□□ -0.14
PRKN-201ENST00000338468 BIKQ13323 160 aa14.17□□□□□ -0.14
PRKN-201ENST00000338468 OR52E8Q6IFG1 317 aa14.17□□□□□ -0.14
PRKN-201ENST00000338468 HSDL2Q6YN16 418 aa14.17□□□□□ -0.14
PRKN-201ENST00000338468 PAGE2Q7Z2X7 111 aa14.17□□□□□ -0.14
PRKN-201ENST00000338468 TICAM1Q8IUC6 712 aa14.17□□□□□ -0.14
PRKN-201ENST00000338468 C10orf107Q8IVU9 208 aa14.17□□□□□ -0.14
PRKN-201ENST00000338468 ST13P4Q8IZP2 240 aaPredicted RBP14.17□□□□□ -0.14
PRKN-201ENST00000338468 NR4A3Q92570 626 aa14.17□□□□□ -0.14
PRKN-201ENST00000338468 TM4SF18Q96CE8 201 aa14.17□□□□□ -0.14
PRKN-201ENST00000338468 C11orf24Q96F05 449 aaPredicted RBP14.17□□□□□ -0.14
PRKN-201ENST00000338468 SENP5Q96HI0 755 aaPredicted RBP14.17□□□□□ -0.14
PRKN-201ENST00000338468 MID1IP1Q9NPA3 183 aa14.17□□□□□ -0.14
PRKN-201ENST00000338468 OLAHQ9NV23 265 aa14.17□□□□□ -0.14
PRKN-201ENST00000338468 MYOTQ9UBF9 498 aa14.17□□□□□ -0.14
PRKN-201ENST00000338468 VPS29Q9UBQ0 182 aa14.17□□□□□ -0.14
PRKN-201ENST00000338468 SERTM1A2A2V5 107 aa14.16□□□□□ -0.14
PRKN-201ENST00000338468 ASPDHA6ND91 283 aa14.16□□□□□ -0.14
PRKN-201ENST00000338468 FCHO1O14526 889 aa14.16□□□□□ -0.14
PRKN-201ENST00000338468 SLC25A12O75746 678 aa14.16□□□□□ -0.14
PRKN-201ENST00000338468 OR2J2O76002 312 aa14.16□□□□□ -0.14
PRKN-201ENST00000338468 CLDN1O95832 211 aa14.16□□□□□ -0.14
PRKN-201ENST00000338468 CLPSP04118 112 aa14.16□□□□□ -0.14
PRKN-201ENST00000338468 CD46P15529 392 aa14.16□□□□□ -0.14
PRKN-201ENST00000338468 HMOX2P30519 316 aa14.16□□□□□ -0.14
PRKN-201ENST00000338468 HK2P52789 917 aa14.16□□□□□ -0.14
PRKN-201ENST00000338468 MAPK12P53778 367 aa14.16□□□□□ -0.14
PRKN-201ENST00000338468 RNF4P78317 190 aa14.16□□□□□ -0.14
PRKN-201ENST00000338468 PLIN5Q00G26 463 aa14.16□□□□□ -0.14
PRKN-201ENST00000338468 HMGCS1Q01581 520 aa14.16□□□□□ -0.14
PRKN-201ENST00000338468 SPRED3Q2MJR0 410 aa14.16□□□□□ -0.14
PRKN-201ENST00000338468 ZNF750Q32MQ0 723 aa14.16□□□□□ -0.14
PRKN-201ENST00000338468 LIPMQ5VYY2 423 aa14.16□□□□□ -0.14
PRKN-201ENST00000338468 SLC25A25Q6KCM7 469 aa14.16□□□□□ -0.14
PRKN-201ENST00000338468 SCIMPQ6UWF3 145 aa14.16□□□□□ -0.14
PRKN-201ENST00000338468 GALNTL5Q7Z4T8 443 aa14.16□□□□□ -0.14
PRKN-201ENST00000338468 C9orf40Q8IXQ3 194 aa14.16□□□□□ -0.14
PRKN-201ENST00000338468 SRRM1Q8IYB3 904 aaKnown RBP14.16□□□□□ -0.14
PRKN-201ENST00000338468 GBP7Q8N8V2 638 aaPredicted RBP14.16□□□□□ -0.14
PRKN-201ENST00000338468 CCDC63Q8NA47 563 aa14.16□□□□□ -0.14
PRKN-201ENST00000338468 C7orf57Q8NEG2 295 aa14.16□□□□□ -0.14
PRKN-201ENST00000338468 OR8K3Q8NH51 312 aa14.16□□□□□ -0.14
PRKN-201ENST00000338468 APIPQ96GX9 242 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms